Strain Fitness in Kangiella aquimarina DSM 16071

Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1529

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG

download strain data

Per-strain Table

Position	Strand	LocusTag	Fraction	marine broth
				remove
1,582,398	+			-1.1
1,582,398	+			-0.2
1,582,406	-			-0.8
1,582,406	-			+6.0
1,582,406	-			+0.1
1,582,411	+			+0.3
1,582,411	+			-0.5
1,582,411	-			-1.8
1,582,434	+			+2.5
1,582,435	-			+3.7
1,582,435	-			-0.7
1,582,494	+			+0.1
1,582,573	-			-0.2
1,582,626	-			-2.0
1,582,634	-			-1.1
1,582,635	-			-0.8
1,582,635	-			-0.9
1,582,660	-			-0.9
1,582,665	-			-0.9
1,582,665	-			-0.4
1,582,733	+			-0.2
1,582,761	+			-0.7
1,582,761	-			-1.2
1,582,763	+			+1.5
1,582,769	-			-0.2
1,582,769	-			+0.6
1,582,769	-			-0.1
1,582,769	-			-0.6
1,582,771	-			-0.1
1,582,898	+			+2.8
1,582,910	-			-0.7
1,583,281	-			-1.2
1,583,468	-			+0.4
1,583,484	+			+5.5
1,583,484	+			+1.7
1,583,492	-			+1.0
1,583,492	-			-0.8
1,583,492	-			+1.7
1,583,492	-			-0.5
1,583,494	+			+0.5
1,583,494	+			-0.6
1,583,502	-			+2.2
1,583,520	-			+2.8
1,583,535	-			-0.0
1,583,571	+			+4.4
1,583,595	+	B158DRAFT_1529	0.11	+4.7
1,583,600	+	B158DRAFT_1529	0.11	+3.3
1,583,600	+	B158DRAFT_1529	0.11	+4.0
1,583,608	-	B158DRAFT_1529	0.11	+3.4
1,583,619	+	B158DRAFT_1529	0.12	+4.3
1,583,627	-	B158DRAFT_1529	0.12	+4.4
1,583,634	+	B158DRAFT_1529	0.12	+0.9
1,583,642	-	B158DRAFT_1529	0.12	-0.0
1,583,652	+	B158DRAFT_1529	0.13	-0.9
1,583,681	+	B158DRAFT_1529	0.14	+3.4
1,583,694	-	B158DRAFT_1529	0.14	-0.1
1,583,704	+	B158DRAFT_1529	0.15	-1.0
1,583,728	+	B158DRAFT_1529	0.16	-0.3
1,583,728	+	B158DRAFT_1529	0.16	+5.2
1,583,728	+	B158DRAFT_1529	0.16	-0.3
1,583,728	+	B158DRAFT_1529	0.16	-2.2
1,583,728	+	B158DRAFT_1529	0.16	-1.0
1,583,728	+	B158DRAFT_1529	0.16	+1.9
1,583,730	+	B158DRAFT_1529	0.16	+0.1
1,583,736	-	B158DRAFT_1529	0.16	-0.3
1,583,736	-	B158DRAFT_1529	0.16	+3.6
1,583,736	-	B158DRAFT_1529	0.16	-0.9
1,583,736	-	B158DRAFT_1529	0.16	+0.8
1,583,736	-	B158DRAFT_1529	0.16	+6.3
1,583,736	-	B158DRAFT_1529	0.16	-0.2
1,583,736	-	B158DRAFT_1529	0.16	+4.0
1,583,736	-	B158DRAFT_1529	0.16	+0.7
1,583,736	-	B158DRAFT_1529	0.16	+0.9
1,583,736	-	B158DRAFT_1529	0.16	+3.5
1,583,788	+	B158DRAFT_1529	0.18	+0.9
1,583,788	+	B158DRAFT_1529	0.18	-1.8
1,583,827	+	B158DRAFT_1529	0.20	-1.4
1,583,827	+	B158DRAFT_1529	0.20	+0.1
1,583,835	-	B158DRAFT_1529	0.20	+5.1
1,583,835	-	B158DRAFT_1529	0.20	-1.0
1,583,930	-	B158DRAFT_1529	0.24	-0.7
1,583,930	-	B158DRAFT_1529	0.24	+0.6
1,583,930	-	B158DRAFT_1529	0.24	+5.2
1,583,988	-	B158DRAFT_1529	0.26	+5.6
1,584,008	+	B158DRAFT_1529	0.27	-0.5
1,584,008	+	B158DRAFT_1529	0.27	+1.5
1,584,016	-	B158DRAFT_1529	0.27	+0.4
1,584,016	-	B158DRAFT_1529	0.27	+0.9
1,584,016	-	B158DRAFT_1529	0.27	+1.4
1,584,025	+	B158DRAFT_1529	0.27	+0.7
1,584,042	+	B158DRAFT_1529	0.28	+4.2
1,584,058	-	B158DRAFT_1529	0.29	+2.4
1,584,058	-	B158DRAFT_1529	0.29	+0.5
1,584,060	+	B158DRAFT_1529	0.29	-1.6
1,584,060	+	B158DRAFT_1529	0.29	-0.6
1,584,060	+	B158DRAFT_1529	0.29	+0.3
1,584,060	+	B158DRAFT_1529	0.29	+0.0
1,584,068	-	B158DRAFT_1529	0.29	+4.2
1,584,099	-	B158DRAFT_1529	0.30	-1.8
1,584,115	+	B158DRAFT_1529	0.31	+4.5
1,584,115	+	B158DRAFT_1529	0.31	+2.8
1,584,123	-	B158DRAFT_1529	0.31	+2.5
1,584,123	-	B158DRAFT_1529	0.31	+1.8
1,584,162	-	B158DRAFT_1529	0.33	+2.0
1,584,220	+	B158DRAFT_1529	0.35	+6.6
1,584,228	-	B158DRAFT_1529	0.35	-0.4
1,584,230	+	B158DRAFT_1529	0.35	+0.0
1,584,230	+	B158DRAFT_1529	0.35	+2.8
1,584,230	+	B158DRAFT_1529	0.35	-1.8
1,584,238	-	B158DRAFT_1529	0.35	+6.4
1,584,238	-	B158DRAFT_1529	0.35	-0.2
1,584,339	+	B158DRAFT_1529	0.39	+0.2
1,584,347	-	B158DRAFT_1529	0.40	+1.6
1,584,352	-	B158DRAFT_1529	0.40	-0.6
1,584,353	+	B158DRAFT_1529	0.40	+1.8
1,584,361	-	B158DRAFT_1529	0.40	+0.8
1,584,505	+	B158DRAFT_1529	0.46	+1.3
1,584,505	+	B158DRAFT_1529	0.46	-0.1
1,584,513	+	B158DRAFT_1529	0.46	+3.5
1,584,515	+	B158DRAFT_1529	0.46	+1.4
1,584,523	-	B158DRAFT_1529	0.46	+0.8
1,584,544	+	B158DRAFT_1529	0.47	+0.1
1,584,552	-	B158DRAFT_1529	0.48	+4.3
1,584,552	-	B158DRAFT_1529	0.48	+3.5
1,584,608	+	B158DRAFT_1529	0.50	+0.2
1,584,609	-	B158DRAFT_1529	0.50	+2.6
1,584,665	-	B158DRAFT_1529	0.52	+0.5
1,584,781	-	B158DRAFT_1529	0.56	+1.0
1,584,808	+	B158DRAFT_1529	0.57	+5.6
1,584,808	+	B158DRAFT_1529	0.57	-1.3
1,584,808	+	B158DRAFT_1529	0.57	+1.0
1,584,808	+	B158DRAFT_1529	0.57	-0.1
1,584,808	+	B158DRAFT_1529	0.57	+2.0
1,584,808	+	B158DRAFT_1529	0.57	-1.1
1,584,816	-	B158DRAFT_1529	0.58	-0.0
1,584,816	-	B158DRAFT_1529	0.58	+4.5
1,584,816	-	B158DRAFT_1529	0.58	+2.4
1,584,818	+	B158DRAFT_1529	0.58	+0.4
1,584,818	+	B158DRAFT_1529	0.58	+2.3
1,584,818	+	B158DRAFT_1529	0.58	-0.0
1,584,818	+	B158DRAFT_1529	0.58	+4.4
1,584,818	+	B158DRAFT_1529	0.58	-1.8
1,584,818	+	B158DRAFT_1529	0.58	+2.5
1,584,818	+	B158DRAFT_1529	0.58	+3.0
1,584,818	+	B158DRAFT_1529	0.58	-0.7
1,584,818	+	B158DRAFT_1529	0.58	-0.6
1,584,818	+	B158DRAFT_1529	0.58	-1.3
1,584,818	+	B158DRAFT_1529	0.58	+0.6
1,584,826	-	B158DRAFT_1529	0.58	+3.5
1,584,826	-	B158DRAFT_1529	0.58	+4.1
1,584,826	-	B158DRAFT_1529	0.58	+5.3
1,584,826	-	B158DRAFT_1529	0.58	-0.0
1,584,826	-	B158DRAFT_1529	0.58	+1.0
1,584,826	-	B158DRAFT_1529	0.58	+2.8
1,584,826	-	B158DRAFT_1529	0.58	+4.2
1,584,826	-			+3.4
1,584,826	-	B158DRAFT_1529	0.58	+6.5
1,584,826	-	B158DRAFT_1529	0.58	+3.7
1,584,826	-	B158DRAFT_1529	0.58	+0.1
1,584,826	-	B158DRAFT_1529	0.58	+0.2
1,584,826	-	B158DRAFT_1529	0.58	+0.4
1,584,891	-	B158DRAFT_1529	0.61	-1.1
1,584,891	-	B158DRAFT_1529	0.61	+3.6
1,584,915	+	B158DRAFT_1529	0.62	+2.9
1,584,915	+	B158DRAFT_1529	0.62	+3.0
1,584,923	-	B158DRAFT_1529	0.62	-0.4
1,584,928	-	B158DRAFT_1529	0.62	+0.0
1,584,928	-	B158DRAFT_1529	0.62	-1.8
1,584,950	+	B158DRAFT_1529	0.63	+3.2
1,584,957	+	B158DRAFT_1529	0.63	+0.7
1,584,958	-	B158DRAFT_1529	0.63	+1.0
1,584,965	-	B158DRAFT_1529	0.63	+0.5
1,585,018	+	B158DRAFT_1529	0.66	+3.2
1,585,025	-	B158DRAFT_1529	0.66	+2.4
1,585,027	+	B158DRAFT_1529	0.66	+4.1
1,585,027	+	B158DRAFT_1529	0.66	+2.5
1,585,027	+	B158DRAFT_1529	0.66	+0.7
1,585,027	+	B158DRAFT_1529	0.66	-0.2
1,585,027	+	B158DRAFT_1529	0.66	+3.0
1,585,027	+	B158DRAFT_1529	0.66	+1.0
1,585,027	+	B158DRAFT_1529	0.66	+5.4
1,585,029	+	B158DRAFT_1529	0.66	-1.2
1,585,029	+	B158DRAFT_1529	0.66	+0.8
1,585,029	+	B158DRAFT_1529	0.66	-1.3
1,585,029	+	B158DRAFT_1529	0.66	+4.0
1,585,029	+	B158DRAFT_1529	0.66	+4.4
1,585,035	-	B158DRAFT_1529	0.66	+2.0
1,585,035	-	B158DRAFT_1529	0.66	+5.3
1,585,035	-	B158DRAFT_1529	0.66	+2.8
1,585,035	-	B158DRAFT_1529	0.66	+1.6
1,585,035	-	B158DRAFT_1529	0.66	+1.6
1,585,037	-	B158DRAFT_1529	0.66	+0.4
1,585,037	-	B158DRAFT_1529	0.66	-0.9
1,585,037	-	B158DRAFT_1529	0.66	+0.6
1,585,063	+	B158DRAFT_1529	0.67	-0.3
1,585,063	+	B158DRAFT_1529	0.67	+1.8
1,585,096	-	B158DRAFT_1529	0.69	+3.3
1,585,146	+	B158DRAFT_1529	0.70	+3.9
1,585,154	-	B158DRAFT_1529	0.71	+1.8
1,585,154	-	B158DRAFT_1529	0.71	+3.4
1,585,154	-	B158DRAFT_1529	0.71	+0.7
1,585,156	+	B158DRAFT_1529	0.71	+0.5
1,585,164	-	B158DRAFT_1529	0.71	+2.5
1,585,164	-	B158DRAFT_1529	0.71	-0.9
1,585,175	-	B158DRAFT_1529	0.72	+0.5
1,585,221	-	B158DRAFT_1529	0.73	+3.1
1,585,228	+	B158DRAFT_1529	0.74	+0.7
1,585,235	+	B158DRAFT_1529	0.74	-1.6
1,585,238	-	B158DRAFT_1529	0.74	+0.1
1,585,251	-	B158DRAFT_1529	0.74	+4.9
1,585,319	+	B158DRAFT_1529	0.77	+3.7
1,585,319	+	B158DRAFT_1529	0.77	-0.6
1,585,319	+	B158DRAFT_1529	0.77	-0.2
1,585,319	+	B158DRAFT_1529	0.77	-1.4
1,585,319	+	B158DRAFT_1529	0.77	+2.6
1,585,319	+	B158DRAFT_1529	0.77	-0.2
1,585,319	+	B158DRAFT_1529	0.77	+0.5
1,585,319	+	B158DRAFT_1529	0.77	+0.8
1,585,319	+	B158DRAFT_1529	0.77	+1.9
1,585,327	-	B158DRAFT_1529	0.77	-0.8
1,585,327	-	B158DRAFT_1529	0.77	+0.3
1,585,327	-	B158DRAFT_1529	0.77	+3.6
1,585,327	-	B158DRAFT_1529	0.77	+3.0
1,585,327	-	B158DRAFT_1529	0.77	+0.7
1,585,327	-	B158DRAFT_1529	0.77	+0.8
1,585,327	-	B158DRAFT_1529	0.77	+0.3
1,585,338	-	B158DRAFT_1529	0.78	+4.4
1,585,382	+	B158DRAFT_1529	0.80	-0.8
1,585,382	+	B158DRAFT_1529	0.80	+1.5
1,585,382	+	B158DRAFT_1529	0.80	+3.2
1,585,382	+	B158DRAFT_1529	0.80	+5.5
1,585,382	+	B158DRAFT_1529	0.80	-0.4
1,585,390	-	B158DRAFT_1529	0.80	-0.3
1,585,390	-	B158DRAFT_1529	0.80	+4.3
1,585,390	-	B158DRAFT_1529	0.80	+5.3
1,585,390	-	B158DRAFT_1529	0.80	+0.5
1,585,390	-	B158DRAFT_1529	0.80	+2.8
1,585,390	-	B158DRAFT_1529	0.80	-1.7
1,585,416	+	B158DRAFT_1529	0.81	+0.5
1,585,452	+	B158DRAFT_1529	0.82	+1.4
1,585,471	-	B158DRAFT_1529	0.83	-0.2
1,585,494	+	B158DRAFT_1529	0.84	-1.1
1,585,566	+	B158DRAFT_1529	0.87	+1.4
1,585,566	+	B158DRAFT_1529	0.87	-0.5
1,585,582	+	B158DRAFT_1529	0.87	+2.4
1,585,590	-	B158DRAFT_1529	0.88	-0.7
1,585,592	+	B158DRAFT_1529	0.88	+4.5
1,585,657	+			+4.4
1,585,671	+			-1.6
1,585,722	+			-0.1
1,585,722	+			+4.3
1,585,727	+			-0.4
1,585,732	+			+0.2
1,585,732	+			+6.9
1,585,740	-			-0.9
1,585,740	-			-0.7
1,585,740	-			+1.8
1,585,740	-			+4.9
1,585,740	-			+0.2
1,585,753	-			-0.4
1,585,770	+			-1.3
1,585,778	-			+0.6
1,585,778	-			-0.7
1,585,800	+			+6.2
1,585,853	+			-0.9
1,585,855	+			-0.2
1,585,861	-			+4.3
1,585,878	-			+2.1
1,585,945	+			+5.4
1,585,945	+			+4.5
1,585,946	+			+4.6
1,585,953	-			+0.6
1,585,971	-			+0.2
1,585,986	-			-0.3
1,585,991	+			-2.3
1,585,999	-			-0.8
1,585,999	-			+1.2
1,586,019	+			-0.7
1,586,091	+	B158DRAFT_1530	0.18	-1.3
1,586,099	-	B158DRAFT_1530	0.19	-0.9
1,586,103	+	B158DRAFT_1530	0.20	-1.2
1,586,103	+	B158DRAFT_1530	0.20	-1.7
1,586,103	+	B158DRAFT_1530	0.20	-0.1
1,586,103	+	B158DRAFT_1530	0.20	-0.4
1,586,103	+	B158DRAFT_1530	0.20	+1.0
1,586,103	+	B158DRAFT_1530	0.20	-0.8
1,586,103	+	B158DRAFT_1530	0.20	+0.2
1,586,103	+	B158DRAFT_1530	0.20	+0.5
1,586,103	+	B158DRAFT_1530	0.20	+0.7
1,586,103	+	B158DRAFT_1530	0.20	+0.4
1,586,103	+	B158DRAFT_1530	0.20	-0.5
1,586,103	+	B158DRAFT_1530	0.20	+0.8
1,586,103	+	B158DRAFT_1530	0.20	-0.9
1,586,103	+	B158DRAFT_1530	0.20	+0.5
1,586,103	+	B158DRAFT_1530	0.20	+1.2
1,586,103	+	B158DRAFT_1530	0.20	+1.8
1,586,103	+	B158DRAFT_1530	0.20	-0.0
1,586,106	-	B158DRAFT_1530	0.20	+0.5
1,586,111	-	B158DRAFT_1530	0.21	+0.7
1,586,111	-	B158DRAFT_1530	0.21	-0.5
1,586,111	-	B158DRAFT_1530	0.21	-1.3
1,586,111	-	B158DRAFT_1530	0.21	+1.0
1,586,111	-	B158DRAFT_1530	0.21	+2.2
1,586,111	-	B158DRAFT_1530	0.21	-0.7
1,586,111	-	B158DRAFT_1530	0.21	-2.1
1,586,111	-	B158DRAFT_1530	0.21	+0.6
1,586,111	-	B158DRAFT_1530	0.21	-0.3
1,586,111	-	B158DRAFT_1530	0.21	-0.6
1,586,111	-	B158DRAFT_1530	0.21	+0.6
1,586,111	-	B158DRAFT_1530	0.21	+0.6
1,586,111	-	B158DRAFT_1530	0.21	+0.4
1,586,111	-	B158DRAFT_1530	0.21	+2.8
1,586,111	-	B158DRAFT_1530	0.21	+0.0
1,586,111	-	B158DRAFT_1530	0.21	+0.9
1,586,111	-	B158DRAFT_1530	0.21	-0.6
1,586,111	-	B158DRAFT_1530	0.21	+1.1
1,586,111	-	B158DRAFT_1530	0.21	-0.0
1,586,111	-	B158DRAFT_1530	0.21	+0.8
1,586,130	+	B158DRAFT_1530	0.25	-1.5
1,586,135	+	B158DRAFT_1530	0.26	+2.5
1,586,135	+	B158DRAFT_1530	0.26	+1.0
1,586,143	-	B158DRAFT_1530	0.28	-0.3
1,586,143	-	B158DRAFT_1530	0.28	-1.7
1,586,143	-	B158DRAFT_1530	0.28	+0.5
1,586,143	-	B158DRAFT_1530	0.28	+1.2
1,586,143	-	B158DRAFT_1530	0.28	-1.2
1,586,145	+	B158DRAFT_1530	0.28	-0.1
1,586,162	+	B158DRAFT_1530	0.31	-2.3
1,586,162	+	B158DRAFT_1530	0.31	+0.7
1,586,162	+	B158DRAFT_1530	0.31	+2.0
1,586,170	-	B158DRAFT_1530	0.33	-0.8
1,586,170	-	B158DRAFT_1530	0.33	-0.8
1,586,186	+	B158DRAFT_1530	0.36	-0.5
1,586,193	-	B158DRAFT_1530	0.37	-0.3
1,586,194	-	B158DRAFT_1530	0.37	-0.1
1,586,194	-	B158DRAFT_1530	0.37	+0.5
1,586,211	+	B158DRAFT_1530	0.41	-0.0
1,586,218	+	B158DRAFT_1530	0.42	+0.6
1,586,241	+	B158DRAFT_1530	0.46	-1.6
1,586,278	-	B158DRAFT_1530	0.53	-0.1
1,586,302	+	B158DRAFT_1530	0.58	+0.8
1,586,364	+	B158DRAFT_1530	0.70	+1.2
1,586,372	-	B158DRAFT_1530	0.71	-1.8
1,586,372	-	B158DRAFT_1530	0.71	-1.3
1,586,383	+	B158DRAFT_1530	0.74	-1.0
1,586,391	-	B158DRAFT_1530	0.75	+0.1
1,586,418	+	B158DRAFT_1530	0.80	+1.1
1,586,671	-			-1.1
1,586,702	-			+0.9
1,586,726	+			+1.6
1,586,734	-			-0.3
1,586,740	-			-1.6
1,586,744	+			-1.1
1,586,744	+			+1.8
1,586,752	-			+1.9
1,586,787	+	B158DRAFT_1531	0.12	+1.0
1,586,812	+	B158DRAFT_1531	0.15	+0.8
1,586,812	+	B158DRAFT_1531	0.15	+0.3
1,586,820	-	B158DRAFT_1531	0.15	-1.0
1,586,834	-	B158DRAFT_1531	0.17	+0.6
1,586,848	+	B158DRAFT_1531	0.18	-0.1
1,586,864	-	B158DRAFT_1531	0.20	-1.4
1,586,897	+	B158DRAFT_1531	0.23	+1.1

Or see this region's nucleotide sequence