Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1468

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1464 and B158DRAFT_1465 are separated by 25 nucleotidesB158DRAFT_1465 and B158DRAFT_1466 are separated by 120 nucleotidesB158DRAFT_1466 and B158DRAFT_1467 are separated by 216 nucleotidesB158DRAFT_1467 and B158DRAFT_1468 are separated by 84 nucleotidesB158DRAFT_1468 and B158DRAFT_1469 are separated by 344 nucleotides B158DRAFT_1464: B158DRAFT_1464 - ferredoxin, 2Fe-2S type, ISC system, at 1,517,495 to 1,517,833 _1464 B158DRAFT_1465: B158DRAFT_1465 - FeS assembly protein IscX, at 1,517,859 to 1,518,053 _1465 B158DRAFT_1466: B158DRAFT_1466 - tRNA_Lys_TTT, at 1,518,174 to 1,518,249 _1466 B158DRAFT_1467: B158DRAFT_1467 - tRNA_Lys_TTT, at 1,518,466 to 1,518,541 _1467 B158DRAFT_1468: B158DRAFT_1468 - Predicted transcriptional regulators, at 1,518,626 to 1,519,354 _1468 B158DRAFT_1469: B158DRAFT_1469 - hypothetical protein, at 1,519,699 to 1,520,340 _1469 Position (kb) 1518 1519 1520Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 1517.887 kb on + strand, within B158DRAFT_1465at 1517.895 kb on - strand, within B158DRAFT_1465at 1517.895 kb on - strand, within B158DRAFT_1465at 1517.909 kb on + strand, within B158DRAFT_1465at 1517.983 kb on - strand, within B158DRAFT_1465at 1517.986 kb on + strand, within B158DRAFT_1465at 1517.993 kb on + strand, within B158DRAFT_1465at 1518.005 kb on + strand, within B158DRAFT_1465at 1518.011 kb on + strand, within B158DRAFT_1465at 1518.034 kb on + strandat 1518.034 kb on + strandat 1518.218 kb on + strand, within B158DRAFT_1466at 1518.259 kb on + strandat 1518.263 kb on + strandat 1518.269 kb on - strandat 1518.269 kb on - strandat 1518.517 kb on + strand, within B158DRAFT_1467at 1518.529 kb on + strand, within B158DRAFT_1467at 1518.564 kb on - strandat 1518.566 kb on - strandat 1518.671 kb on + strandat 1518.671 kb on + strandat 1518.671 kb on + strandat 1518.707 kb on + strand, within B158DRAFT_1468at 1518.727 kb on - strand, within B158DRAFT_1468at 1518.800 kb on - strand, within B158DRAFT_1468at 1518.805 kb on - strand, within B158DRAFT_1468at 1518.817 kb on - strand, within B158DRAFT_1468at 1518.818 kb on + strand, within B158DRAFT_1468at 1518.871 kb on + strand, within B158DRAFT_1468at 1518.886 kb on - strand, within B158DRAFT_1468at 1518.889 kb on + strand, within B158DRAFT_1468at 1518.950 kb on + strand, within B158DRAFT_1468at 1518.950 kb on + strand, within B158DRAFT_1468at 1518.958 kb on - strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.045 kb on - strand, within B158DRAFT_1468at 1519.045 kb on - strand, within B158DRAFT_1468at 1519.157 kb on + strand, within B158DRAFT_1468at 1519.157 kb on + strand, within B158DRAFT_1468at 1519.157 kb on + strand, within B158DRAFT_1468at 1519.157 kb on + strand, within B158DRAFT_1468at 1519.165 kb on - strand, within B158DRAFT_1468at 1519.185 kb on - strand, within B158DRAFT_1468at 1519.197 kb on + strand, within B158DRAFT_1468at 1519.198 kb on - strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.208 kb on - strand, within B158DRAFT_1468at 1519.208 kb on - strand, within B158DRAFT_1468at 1519.208 kb on - strand, within B158DRAFT_1468at 1519.208 kb on - strand, within B158DRAFT_1468at 1519.208 kb on - strand, within B158DRAFT_1468at 1519.268 kb on - strand, within B158DRAFT_1468at 1519.268 kb on - strand, within B158DRAFT_1468at 1519.270 kb on + strand, within B158DRAFT_1468at 1519.270 kb on + strand, within B158DRAFT_1468at 1519.270 kb on + strand, within B158DRAFT_1468at 1519.273 kb on - strand, within B158DRAFT_1468at 1519.278 kb on - strand, within B158DRAFT_1468at 1519.278 kb on - strand, within B158DRAFT_1468at 1519.278 kb on - strand, within B158DRAFT_1468at 1519.311 kb on - strandat 1519.356 kb on - strandat 1519.499 kb on - strandat 1519.533 kb on - strandat 1519.534 kb on + strandat 1519.534 kb on + strandat 1519.534 kb on + strandat 1519.535 kb on + strandat 1519.542 kb on - strandat 1519.543 kb on - strandat 1519.581 kb on + strandat 1519.591 kb on + strandat 1519.594 kb on - strandat 1519.609 kb on - strandat 1519.735 kb on + strandat 1519.743 kb on + strandat 1519.743 kb on + strandat 1519.743 kb on - strandat 1519.743 kb on - strandat 1519.885 kb on - strand, within B158DRAFT_1469at 1519.934 kb on + strand, within B158DRAFT_1469at 1519.979 kb on - strand, within B158DRAFT_1469at 1520.108 kb on + strand, within B158DRAFT_1469at 1520.116 kb on - strand, within B158DRAFT_1469at 1520.166 kb on + strand, within B158DRAFT_1469

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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1,517,887 + B158DRAFT_1465 0.14 +0.1
1,517,895 - B158DRAFT_1465 0.18 +1.3
1,517,895 - B158DRAFT_1465 0.18 +2.5
1,517,909 + B158DRAFT_1465 0.26 -1.6
1,517,983 - B158DRAFT_1465 0.64 -0.2
1,517,986 + B158DRAFT_1465 0.65 +0.9
1,517,993 + B158DRAFT_1465 0.69 +0.7
1,518,005 + B158DRAFT_1465 0.75 +1.0
1,518,011 + B158DRAFT_1465 0.78 +0.3
1,518,034 + +1.9
1,518,034 + +1.1
1,518,218 + B158DRAFT_1466 0.58 -0.5
1,518,259 + -0.0
1,518,263 + -0.9
1,518,269 - -1.0
1,518,269 - +0.3
1,518,517 + B158DRAFT_1467 0.67 -0.1
1,518,529 + B158DRAFT_1467 0.83 +1.8
1,518,564 - -0.2
1,518,566 - +0.7
1,518,671 + +4.0
1,518,671 + -1.5
1,518,671 + -0.7
1,518,707 + B158DRAFT_1468 0.11 -1.2
1,518,727 - B158DRAFT_1468 0.14 -3.0
1,518,800 - B158DRAFT_1468 0.24 -1.5
1,518,805 - B158DRAFT_1468 0.25 -0.5
1,518,817 - B158DRAFT_1468 0.26 +0.4
1,518,818 + B158DRAFT_1468 0.26 -2.2
1,518,871 + B158DRAFT_1468 0.34 -0.8
1,518,886 - B158DRAFT_1468 0.36 -0.9
1,518,889 + B158DRAFT_1468 0.36 +0.8
1,518,950 + B158DRAFT_1468 0.44 +0.8
1,518,950 + B158DRAFT_1468 0.44 -1.0
1,518,958 - B158DRAFT_1468 0.46 +0.1
1,519,037 + B158DRAFT_1468 0.56 +0.3
1,519,037 + B158DRAFT_1468 0.56 +0.3
1,519,037 + B158DRAFT_1468 0.56 +1.3
1,519,037 + B158DRAFT_1468 0.56 -0.5
1,519,037 + B158DRAFT_1468 0.56 -0.1
1,519,037 + B158DRAFT_1468 0.56 +0.4
1,519,045 - B158DRAFT_1468 0.57 +0.5
1,519,045 - B158DRAFT_1468 0.57 -0.4
1,519,157 + B158DRAFT_1468 0.73 -1.3
1,519,157 + B158DRAFT_1468 0.73 -0.2
1,519,157 + B158DRAFT_1468 0.73 -1.6
1,519,157 + B158DRAFT_1468 0.73 -1.4
1,519,165 - B158DRAFT_1468 0.74 +1.6
1,519,185 - B158DRAFT_1468 0.77 -1.5
1,519,197 + B158DRAFT_1468 0.78 -0.7
1,519,198 - B158DRAFT_1468 0.78 -0.3
1,519,200 + B158DRAFT_1468 0.79 -0.9
1,519,200 + B158DRAFT_1468 0.79 -0.7
1,519,200 + B158DRAFT_1468 0.79 -1.7
1,519,200 + B158DRAFT_1468 0.79 -0.6
1,519,200 + B158DRAFT_1468 0.79 -0.4
1,519,200 + B158DRAFT_1468 0.79 -0.3
1,519,200 + B158DRAFT_1468 0.79 +1.4
1,519,200 + B158DRAFT_1468 0.79 -0.6
1,519,200 + B158DRAFT_1468 0.79 -0.5
1,519,200 + B158DRAFT_1468 0.79 -0.7
1,519,208 - B158DRAFT_1468 0.80 -1.5
1,519,208 - B158DRAFT_1468 0.80 +1.4
1,519,208 - B158DRAFT_1468 0.80 -0.8
1,519,208 - B158DRAFT_1468 0.80 -0.3
1,519,208 - B158DRAFT_1468 0.80 -0.5
1,519,268 - B158DRAFT_1468 0.88 -0.6
1,519,268 - B158DRAFT_1468 0.88 +1.0
1,519,270 + B158DRAFT_1468 0.88 +0.6
1,519,270 + B158DRAFT_1468 0.88 +0.3
1,519,270 + B158DRAFT_1468 0.88 +0.8
1,519,273 - B158DRAFT_1468 0.89 +2.7
1,519,278 - B158DRAFT_1468 0.89 -1.0
1,519,278 - B158DRAFT_1468 0.89 -0.8
1,519,278 - B158DRAFT_1468 0.89 -0.1
1,519,311 - +0.5
1,519,356 - -1.2
1,519,499 - -1.3
1,519,533 - -0.5
1,519,534 + -1.0
1,519,534 + -0.8
1,519,534 + -0.2
1,519,535 + -0.9
1,519,542 - +1.0
1,519,543 - -0.9
1,519,581 + -1.7
1,519,591 + -2.4
1,519,594 - -1.2
1,519,609 - +0.9
1,519,735 + -0.3
1,519,743 + +1.6
1,519,743 + -2.6
1,519,743 - -0.2
1,519,743 - -1.6
1,519,885 - B158DRAFT_1469 0.29 -0.7
1,519,934 + B158DRAFT_1469 0.37 +0.5
1,519,979 - B158DRAFT_1469 0.44 -1.9
1,520,108 + B158DRAFT_1469 0.64 -0.2
1,520,116 - B158DRAFT_1469 0.65 -0.5
1,520,166 + B158DRAFT_1469 0.73 -1.2

Or see this region's nucleotide sequence