Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1366 and B158DRAFT_1367 are separated by 12 nucleotides B158DRAFT_1367 and B158DRAFT_1368 are separated by 61 nucleotides B158DRAFT_1368 and B158DRAFT_1369 are separated by 65 nucleotides B158DRAFT_1369 and B158DRAFT_1370 are separated by 69 nucleotides
B158DRAFT_1366: B158DRAFT_1366 - hypothetical protein, at 1,412,431 to 1,413,354
_1366
B158DRAFT_1367: B158DRAFT_1367 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 1,413,367 to 1,414,122
_1367
B158DRAFT_1368: B158DRAFT_1368 - Acetyltransferases, at 1,414,184 to 1,414,687
_1368
B158DRAFT_1369: B158DRAFT_1369 - hypothetical protein, at 1,414,753 to 1,415,049
_1369
B158DRAFT_1370: B158DRAFT_1370 - Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism, at 1,415,119 to 1,415,688
_1370
Position (kb)
1413
1414
1415 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1412.393 kb on + strand at 1412.434 kb on - strand at 1412.434 kb on - strand at 1412.548 kb on + strand, within B158DRAFT_1366 at 1412.698 kb on + strand, within B158DRAFT_1366 at 1412.698 kb on + strand, within B158DRAFT_1366 at 1412.772 kb on - strand, within B158DRAFT_1366 at 1412.778 kb on - strand, within B158DRAFT_1366 at 1413.022 kb on - strand, within B158DRAFT_1366 at 1413.072 kb on + strand, within B158DRAFT_1366 at 1413.081 kb on - strand, within B158DRAFT_1366 at 1413.083 kb on + strand, within B158DRAFT_1366 at 1413.157 kb on - strand, within B158DRAFT_1366 at 1413.327 kb on + strand at 1413.327 kb on + strand at 1413.335 kb on - strand at 1413.335 kb on - strand at 1413.335 kb on - strand at 1413.335 kb on - strand at 1413.335 kb on - strand at 1413.335 kb on - strand at 1413.335 kb on - strand at 1413.340 kb on - strand at 1413.536 kb on + strand, within B158DRAFT_1367 at 1413.579 kb on - strand, within B158DRAFT_1367 at 1413.620 kb on - strand, within B158DRAFT_1367 at 1413.645 kb on - strand, within B158DRAFT_1367 at 1413.646 kb on + strand, within B158DRAFT_1367 at 1413.652 kb on - strand, within B158DRAFT_1367 at 1413.691 kb on + strand, within B158DRAFT_1367 at 1413.691 kb on + strand, within B158DRAFT_1367 at 1413.844 kb on - strand, within B158DRAFT_1367 at 1413.919 kb on + strand, within B158DRAFT_1367 at 1413.936 kb on - strand, within B158DRAFT_1367 at 1414.023 kb on + strand, within B158DRAFT_1367 at 1414.033 kb on + strand, within B158DRAFT_1367 at 1414.041 kb on - strand, within B158DRAFT_1367 at 1414.083 kb on - strand at 1414.284 kb on + strand, within B158DRAFT_1368 at 1414.292 kb on - strand, within B158DRAFT_1368 at 1414.292 kb on - strand, within B158DRAFT_1368 at 1414.299 kb on + strand, within B158DRAFT_1368 at 1414.299 kb on + strand, within B158DRAFT_1368 at 1414.299 kb on + strand, within B158DRAFT_1368 at 1414.324 kb on + strand, within B158DRAFT_1368 at 1414.335 kb on + strand, within B158DRAFT_1368 at 1414.363 kb on + strand, within B158DRAFT_1368 at 1414.395 kb on - strand, within B158DRAFT_1368 at 1414.419 kb on + strand, within B158DRAFT_1368 at 1414.419 kb on + strand, within B158DRAFT_1368 at 1414.481 kb on + strand, within B158DRAFT_1368 at 1414.484 kb on - strand, within B158DRAFT_1368 at 1414.513 kb on + strand, within B158DRAFT_1368 at 1414.513 kb on + strand, within B158DRAFT_1368 at 1414.513 kb on + strand, within B158DRAFT_1368 at 1414.513 kb on + strand, within B158DRAFT_1368 at 1414.513 kb on + strand, within B158DRAFT_1368 at 1414.513 kb on + strand, within B158DRAFT_1368 at 1414.513 kb on + strand, within B158DRAFT_1368 at 1414.513 kb on + strand, within B158DRAFT_1368 at 1414.521 kb on - strand, within B158DRAFT_1368 at 1414.521 kb on - strand, within B158DRAFT_1368 at 1414.521 kb on - strand, within B158DRAFT_1368 at 1414.521 kb on - strand, within B158DRAFT_1368 at 1414.521 kb on - strand, within B158DRAFT_1368 at 1414.521 kb on - strand, within B158DRAFT_1368 at 1414.521 kb on - strand, within B158DRAFT_1368 at 1414.521 kb on - strand, within B158DRAFT_1368 at 1414.535 kb on - strand, within B158DRAFT_1368 at 1414.541 kb on - strand, within B158DRAFT_1368 at 1414.576 kb on - strand, within B158DRAFT_1368 at 1414.588 kb on - strand, within B158DRAFT_1368 at 1414.604 kb on - strand, within B158DRAFT_1368 at 1414.805 kb on - strand, within B158DRAFT_1369 at 1414.843 kb on + strand, within B158DRAFT_1369 at 1414.921 kb on + strand, within B158DRAFT_1369 at 1414.929 kb on - strand, within B158DRAFT_1369 at 1414.929 kb on - strand, within B158DRAFT_1369 at 1415.012 kb on - strand, within B158DRAFT_1369 at 1415.022 kb on - strand at 1415.064 kb on - strand at 1415.110 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 1,412,393 + -1.6 1,412,434 - +0.2 1,412,434 - -0.6 1,412,548 + B158DRAFT_1366 0.13 -1.5 1,412,698 + B158DRAFT_1366 0.29 +1.0 1,412,698 + B158DRAFT_1366 0.29 +1.6 1,412,772 - B158DRAFT_1366 0.37 -0.1 1,412,778 - B158DRAFT_1366 0.38 -0.1 1,413,022 - B158DRAFT_1366 0.64 -0.7 1,413,072 + B158DRAFT_1366 0.69 -1.4 1,413,081 - B158DRAFT_1366 0.70 -0.7 1,413,083 + B158DRAFT_1366 0.71 -0.7 1,413,157 - B158DRAFT_1366 0.79 -0.2 1,413,327 + -0.1 1,413,327 + -1.4 1,413,335 - -0.7 1,413,335 - -0.9 1,413,335 - +2.1 1,413,335 - -2.8 1,413,335 - +1.3 1,413,335 - +2.0 1,413,335 - -0.3 1,413,340 - +1.7 1,413,536 + B158DRAFT_1367 0.22 -0.7 1,413,579 - B158DRAFT_1367 0.28 +0.4 1,413,620 - B158DRAFT_1367 0.33 -0.7 1,413,645 - B158DRAFT_1367 0.37 -1.4 1,413,646 + B158DRAFT_1367 0.37 +0.3 1,413,652 - B158DRAFT_1367 0.38 +0.6 1,413,691 + B158DRAFT_1367 0.43 -2.2 1,413,691 + B158DRAFT_1367 0.43 +0.6 1,413,844 - B158DRAFT_1367 0.63 -1.4 1,413,919 + B158DRAFT_1367 0.73 -1.0 1,413,936 - B158DRAFT_1367 0.75 -0.4 1,414,023 + B158DRAFT_1367 0.87 -1.6 1,414,033 + B158DRAFT_1367 0.88 +0.5 1,414,041 - B158DRAFT_1367 0.89 -0.8 1,414,083 - -0.0 1,414,284 + B158DRAFT_1368 0.20 +0.3 1,414,292 - B158DRAFT_1368 0.21 -1.0 1,414,292 - B158DRAFT_1368 0.21 +0.6 1,414,299 + B158DRAFT_1368 0.23 +0.9 1,414,299 + B158DRAFT_1368 0.23 -2.0 1,414,299 + B158DRAFT_1368 0.23 -2.3 1,414,324 + B158DRAFT_1368 0.28 +1.3 1,414,335 + B158DRAFT_1368 0.30 +0.2 1,414,363 + B158DRAFT_1368 0.36 +0.7 1,414,395 - B158DRAFT_1368 0.42 -0.8 1,414,419 + B158DRAFT_1368 0.47 -1.1 1,414,419 + B158DRAFT_1368 0.47 -0.8 1,414,481 + B158DRAFT_1368 0.59 -0.5 1,414,484 - B158DRAFT_1368 0.60 +0.1 1,414,513 + B158DRAFT_1368 0.65 -0.1 1,414,513 + B158DRAFT_1368 0.65 +0.2 1,414,513 + B158DRAFT_1368 0.65 +1.3 1,414,513 + B158DRAFT_1368 0.65 +0.4 1,414,513 + B158DRAFT_1368 0.65 -1.9 1,414,513 + B158DRAFT_1368 0.65 -0.7 1,414,513 + B158DRAFT_1368 0.65 -0.2 1,414,513 + B158DRAFT_1368 0.65 -1.1 1,414,521 - B158DRAFT_1368 0.67 -0.3 1,414,521 - B158DRAFT_1368 0.67 -1.2 1,414,521 - B158DRAFT_1368 0.67 -0.4 1,414,521 - B158DRAFT_1368 0.67 +0.5 1,414,521 - B158DRAFT_1368 0.67 +1.7 1,414,521 - B158DRAFT_1368 0.67 -1.7 1,414,521 - B158DRAFT_1368 0.67 -0.8 1,414,521 - B158DRAFT_1368 0.67 -0.8 1,414,535 - B158DRAFT_1368 0.70 -0.1 1,414,541 - B158DRAFT_1368 0.71 -0.2 1,414,576 - B158DRAFT_1368 0.78 -0.1 1,414,588 - B158DRAFT_1368 0.80 -1.1 1,414,604 - B158DRAFT_1368 0.83 +1.0 1,414,805 - B158DRAFT_1369 0.18 +1.1 1,414,843 + B158DRAFT_1369 0.30 +2.1 1,414,921 + B158DRAFT_1369 0.57 +0.8 1,414,929 - B158DRAFT_1369 0.59 +1.7 1,414,929 - B158DRAFT_1369 0.59 +1.2 1,415,012 - B158DRAFT_1369 0.87 +1.4 1,415,022 - -0.1 1,415,064 - +0.3 1,415,110 - -1.5
Or see this region's nucleotide sequence