Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0906

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0904 and B158DRAFT_0905 are separated by 76 nucleotidesB158DRAFT_0905 and B158DRAFT_0906 are separated by 181 nucleotidesB158DRAFT_0906 and B158DRAFT_0907 are separated by 48 nucleotides B158DRAFT_0904: B158DRAFT_0904 - 1-aminocyclopropane-1-carboxylate deaminase, at 928,282 to 929,145 _0904 B158DRAFT_0905: B158DRAFT_0905 - large conductance mechanosensitive channel protein, at 929,222 to 929,629 _0905 B158DRAFT_0906: B158DRAFT_0906 - Predicted membrane protein, at 929,811 to 930,278 _0906 B158DRAFT_0907: B158DRAFT_0907 - Predicted integral membrane protein, at 930,327 to 931,634 _0907 Position (kb) 929 930 931Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 928.829 kb on - strand, within B158DRAFT_0904at 928.886 kb on - strand, within B158DRAFT_0904at 928.893 kb on + strand, within B158DRAFT_0904at 928.893 kb on + strand, within B158DRAFT_0904at 928.901 kb on - strand, within B158DRAFT_0904at 928.901 kb on - strand, within B158DRAFT_0904at 928.901 kb on - strand, within B158DRAFT_0904at 928.913 kb on - strand, within B158DRAFT_0904at 928.973 kb on - strand, within B158DRAFT_0904at 929.277 kb on + strand, within B158DRAFT_0905at 929.280 kb on - strand, within B158DRAFT_0905at 929.293 kb on - strand, within B158DRAFT_0905at 929.345 kb on - strand, within B158DRAFT_0905at 929.408 kb on + strand, within B158DRAFT_0905at 929.408 kb on + strand, within B158DRAFT_0905at 929.828 kb on - strandat 929.835 kb on + strandat 929.843 kb on - strandat 929.843 kb on - strandat 929.903 kb on + strand, within B158DRAFT_0906at 929.908 kb on + strand, within B158DRAFT_0906at 929.908 kb on + strand, within B158DRAFT_0906at 929.913 kb on + strand, within B158DRAFT_0906at 929.913 kb on + strand, within B158DRAFT_0906at 929.913 kb on + strand, within B158DRAFT_0906at 929.913 kb on + strand, within B158DRAFT_0906at 929.913 kb on + strand, within B158DRAFT_0906at 929.913 kb on + strand, within B158DRAFT_0906at 929.967 kb on + strand, within B158DRAFT_0906at 929.967 kb on + strand, within B158DRAFT_0906at 930.060 kb on + strand, within B158DRAFT_0906at 930.068 kb on - strand, within B158DRAFT_0906at 930.079 kb on + strand, within B158DRAFT_0906at 930.079 kb on + strand, within B158DRAFT_0906at 930.087 kb on - strand, within B158DRAFT_0906at 930.101 kb on + strand, within B158DRAFT_0906at 930.109 kb on - strand, within B158DRAFT_0906at 930.123 kb on + strand, within B158DRAFT_0906at 930.134 kb on + strand, within B158DRAFT_0906at 930.493 kb on - strand, within B158DRAFT_0907at 930.533 kb on + strand, within B158DRAFT_0907at 930.659 kb on - strand, within B158DRAFT_0907at 930.756 kb on + strand, within B158DRAFT_0907at 930.758 kb on + strand, within B158DRAFT_0907at 930.766 kb on - strand, within B158DRAFT_0907at 930.766 kb on - strand, within B158DRAFT_0907at 930.781 kb on - strand, within B158DRAFT_0907at 930.781 kb on - strand, within B158DRAFT_0907at 930.786 kb on - strand, within B158DRAFT_0907at 930.793 kb on + strand, within B158DRAFT_0907at 930.801 kb on - strand, within B158DRAFT_0907at 930.820 kb on + strand, within B158DRAFT_0907at 930.833 kb on - strand, within B158DRAFT_0907at 930.833 kb on - strand, within B158DRAFT_0907at 930.833 kb on - strand, within B158DRAFT_0907at 930.833 kb on - strand, within B158DRAFT_0907at 930.847 kb on + strand, within B158DRAFT_0907at 930.859 kb on + strand, within B158DRAFT_0907at 930.859 kb on + strand, within B158DRAFT_0907at 930.859 kb on + strand, within B158DRAFT_0907at 930.859 kb on + strand, within B158DRAFT_0907at 930.867 kb on - strand, within B158DRAFT_0907at 930.867 kb on - strand, within B158DRAFT_0907at 930.869 kb on + strand, within B158DRAFT_0907at 930.869 kb on + strand, within B158DRAFT_0907at 930.869 kb on + strand, within B158DRAFT_0907at 930.869 kb on + strand, within B158DRAFT_0907at 930.877 kb on - strand, within B158DRAFT_0907at 930.877 kb on - strand, within B158DRAFT_0907at 930.877 kb on - strand, within B158DRAFT_0907at 930.965 kb on + strand, within B158DRAFT_0907at 930.985 kb on + strand, within B158DRAFT_0907at 930.985 kb on + strand, within B158DRAFT_0907at 930.985 kb on + strand, within B158DRAFT_0907at 931.093 kb on + strand, within B158DRAFT_0907at 931.159 kb on - strand, within B158DRAFT_0907at 931.217 kb on + strand, within B158DRAFT_0907at 931.230 kb on - strand, within B158DRAFT_0907at 931.250 kb on + strand, within B158DRAFT_0907

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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928,829 - B158DRAFT_0904 0.63 -1.2
928,886 - B158DRAFT_0904 0.70 -1.8
928,893 + B158DRAFT_0904 0.71 -0.4
928,893 + B158DRAFT_0904 0.71 +0.2
928,901 - B158DRAFT_0904 0.72 -0.6
928,901 - B158DRAFT_0904 0.72 +1.0
928,901 - B158DRAFT_0904 0.72 -0.8
928,913 - B158DRAFT_0904 0.73 +0.2
928,973 - B158DRAFT_0904 0.80 -0.1
929,277 + B158DRAFT_0905 0.13 +3.2
929,280 - B158DRAFT_0905 0.14 +0.0
929,293 - B158DRAFT_0905 0.17 -3.2
929,345 - B158DRAFT_0905 0.30 -0.4
929,408 + B158DRAFT_0905 0.46 -0.0
929,408 + B158DRAFT_0905 0.46 -0.8
929,828 - -0.7
929,835 + -1.9
929,843 - +0.2
929,843 - -1.0
929,903 + B158DRAFT_0906 0.20 -1.8
929,908 + B158DRAFT_0906 0.21 +0.2
929,908 + B158DRAFT_0906 0.21 -1.4
929,913 + B158DRAFT_0906 0.22 -0.7
929,913 + B158DRAFT_0906 0.22 -0.8
929,913 + B158DRAFT_0906 0.22 +0.4
929,913 + B158DRAFT_0906 0.22 -0.7
929,913 + B158DRAFT_0906 0.22 +1.3
929,913 + B158DRAFT_0906 0.22 +0.4
929,967 + B158DRAFT_0906 0.33 +1.2
929,967 + B158DRAFT_0906 0.33 -1.2
930,060 + B158DRAFT_0906 0.53 -0.9
930,068 - B158DRAFT_0906 0.55 -1.1
930,079 + B158DRAFT_0906 0.57 -2.3
930,079 + B158DRAFT_0906 0.57 +0.4
930,087 - B158DRAFT_0906 0.59 -2.4
930,101 + B158DRAFT_0906 0.62 -1.6
930,109 - B158DRAFT_0906 0.64 +0.3
930,123 + B158DRAFT_0906 0.67 +0.2
930,134 + B158DRAFT_0906 0.69 -1.1
930,493 - B158DRAFT_0907 0.13 -0.2
930,533 + B158DRAFT_0907 0.16 +0.8
930,659 - B158DRAFT_0907 0.25 -0.2
930,756 + B158DRAFT_0907 0.33 +1.3
930,758 + B158DRAFT_0907 0.33 +0.9
930,766 - B158DRAFT_0907 0.34 -1.7
930,766 - B158DRAFT_0907 0.34 -0.3
930,781 - B158DRAFT_0907 0.35 +0.4
930,781 - B158DRAFT_0907 0.35 -0.9
930,786 - B158DRAFT_0907 0.35 -0.0
930,793 + B158DRAFT_0907 0.36 -0.5
930,801 - B158DRAFT_0907 0.36 +1.9
930,820 + B158DRAFT_0907 0.38 +0.6
930,833 - B158DRAFT_0907 0.39 +0.2
930,833 - B158DRAFT_0907 0.39 -1.2
930,833 - B158DRAFT_0907 0.39 -1.3
930,833 - B158DRAFT_0907 0.39 -0.7
930,847 + B158DRAFT_0907 0.40 -0.9
930,859 + B158DRAFT_0907 0.41 -0.3
930,859 + B158DRAFT_0907 0.41 +0.3
930,859 + B158DRAFT_0907 0.41 -1.6
930,859 + B158DRAFT_0907 0.41 -0.7
930,867 - B158DRAFT_0907 0.41 -0.2
930,867 - B158DRAFT_0907 0.41 +0.6
930,869 + B158DRAFT_0907 0.41 -2.3
930,869 + B158DRAFT_0907 0.41 -0.0
930,869 + B158DRAFT_0907 0.41 -0.3
930,869 + B158DRAFT_0907 0.41 +1.1
930,877 - B158DRAFT_0907 0.42 -0.6
930,877 - B158DRAFT_0907 0.42 -0.8
930,877 - B158DRAFT_0907 0.42 +0.1
930,965 + B158DRAFT_0907 0.49 +2.4
930,985 + B158DRAFT_0907 0.50 +0.6
930,985 + B158DRAFT_0907 0.50 +0.7
930,985 + B158DRAFT_0907 0.50 +0.5
931,093 + B158DRAFT_0907 0.59 +1.2
931,159 - B158DRAFT_0907 0.64 +1.5
931,217 + B158DRAFT_0907 0.68 +1.0
931,230 - B158DRAFT_0907 0.69 +1.2
931,250 + B158DRAFT_0907 0.71 -1.3

Or see this region's nucleotide sequence