Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0676 and B158DRAFT_0677 are separated by 124 nucleotides B158DRAFT_0677 and B158DRAFT_0678 are separated by 29 nucleotides B158DRAFT_0678 and B158DRAFT_0679 are separated by 67 nucleotides
B158DRAFT_0676: B158DRAFT_0676 - Lauroyl/myristoyl acyltransferase, at 678,299 to 679,789
_0676
B158DRAFT_0677: B158DRAFT_0677 - Uncharacterized small membrane protein, at 679,914 to 680,294
_0677
B158DRAFT_0678: B158DRAFT_0678 - TIGR02444 family protein, at 680,324 to 680,830
_0678
B158DRAFT_0679: B158DRAFT_0679 - FKBP-type peptidyl-prolyl cis-trans isomerases 1, at 680,898 to 681,845
_0679
Position (kb) 679
680
681 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6
7
8 at 678.944 kb on - strand, within B158DRAFT_0676 at 678.957 kb on + strand, within B158DRAFT_0676 at 678.965 kb on - strand, within B158DRAFT_0676 at 678.965 kb on - strand, within B158DRAFT_0676 at 678.965 kb on - strand, within B158DRAFT_0676 at 678.967 kb on + strand, within B158DRAFT_0676 at 678.967 kb on + strand, within B158DRAFT_0676 at 678.967 kb on + strand, within B158DRAFT_0676 at 678.967 kb on + strand, within B158DRAFT_0676 at 678.975 kb on - strand, within B158DRAFT_0676 at 678.975 kb on - strand, within B158DRAFT_0676 at 679.031 kb on - strand, within B158DRAFT_0676 at 679.052 kb on + strand, within B158DRAFT_0676 at 679.060 kb on - strand, within B158DRAFT_0676 at 679.078 kb on - strand, within B158DRAFT_0676 at 679.108 kb on + strand, within B158DRAFT_0676 at 679.116 kb on + strand, within B158DRAFT_0676 at 679.116 kb on + strand, within B158DRAFT_0676 at 679.116 kb on + strand, within B158DRAFT_0676 at 679.116 kb on + strand, within B158DRAFT_0676 at 679.124 kb on - strand, within B158DRAFT_0676 at 679.138 kb on + strand, within B158DRAFT_0676 at 679.156 kb on - strand, within B158DRAFT_0676 at 679.226 kb on - strand, within B158DRAFT_0676 at 679.291 kb on + strand, within B158DRAFT_0676 at 679.315 kb on + strand, within B158DRAFT_0676 at 679.320 kb on + strand, within B158DRAFT_0676 at 679.320 kb on + strand, within B158DRAFT_0676 at 679.366 kb on + strand, within B158DRAFT_0676 at 679.366 kb on + strand, within B158DRAFT_0676 at 679.366 kb on + strand, within B158DRAFT_0676 at 679.407 kb on - strand, within B158DRAFT_0676 at 679.407 kb on - strand, within B158DRAFT_0676 at 679.412 kb on - strand, within B158DRAFT_0676 at 679.468 kb on + strand, within B158DRAFT_0676 at 679.512 kb on + strand, within B158DRAFT_0676 at 679.512 kb on + strand, within B158DRAFT_0676 at 679.521 kb on - strand, within B158DRAFT_0676 at 679.523 kb on + strand, within B158DRAFT_0676 at 679.523 kb on + strand, within B158DRAFT_0676 at 679.523 kb on + strand, within B158DRAFT_0676 at 679.523 kb on + strand, within B158DRAFT_0676 at 679.531 kb on - strand, within B158DRAFT_0676 at 679.531 kb on - strand, within B158DRAFT_0676 at 679.531 kb on - strand, within B158DRAFT_0676 at 679.531 kb on - strand, within B158DRAFT_0676 at 679.531 kb on - strand, within B158DRAFT_0676 at 679.531 kb on - strand, within B158DRAFT_0676 at 679.531 kb on - strand, within B158DRAFT_0676 at 679.531 kb on - strand, within B158DRAFT_0676 at 679.545 kb on + strand, within B158DRAFT_0676 at 679.581 kb on + strand, within B158DRAFT_0676 at 679.588 kb on + strand, within B158DRAFT_0676 at 679.588 kb on + strand, within B158DRAFT_0676 at 679.593 kb on + strand, within B158DRAFT_0676 at 679.593 kb on + strand, within B158DRAFT_0676 at 679.593 kb on + strand, within B158DRAFT_0676 at 679.596 kb on - strand, within B158DRAFT_0676 at 679.601 kb on - strand, within B158DRAFT_0676 at 679.636 kb on + strand, within B158DRAFT_0676 at 679.657 kb on - strand at 679.673 kb on + strand at 679.699 kb on - strand at 679.709 kb on + strand at 679.714 kb on + strand at 679.883 kb on + strand at 679.884 kb on - strand at 679.891 kb on - strand at 679.893 kb on + strand at 679.946 kb on + strand at 679.960 kb on + strand, within B158DRAFT_0677 at 679.965 kb on + strand, within B158DRAFT_0677 at 679.990 kb on + strand, within B158DRAFT_0677 at 679.990 kb on + strand, within B158DRAFT_0677 at 679.990 kb on + strand, within B158DRAFT_0677 at 679.990 kb on + strand, within B158DRAFT_0677 at 679.998 kb on - strand, within B158DRAFT_0677 at 680.011 kb on + strand, within B158DRAFT_0677 at 680.110 kb on - strand, within B158DRAFT_0677 at 680.110 kb on - strand, within B158DRAFT_0677 at 680.110 kb on - strand, within B158DRAFT_0677 at 680.163 kb on - strand, within B158DRAFT_0677 at 680.255 kb on - strand, within B158DRAFT_0677 at 680.255 kb on - strand, within B158DRAFT_0677 at 680.262 kb on + strand at 680.262 kb on + strand at 680.262 kb on + strand at 680.270 kb on - strand at 680.270 kb on - strand at 680.283 kb on - strand at 680.283 kb on - strand at 680.323 kb on - strand at 680.377 kb on - strand, within B158DRAFT_0678 at 680.409 kb on - strand, within B158DRAFT_0678 at 680.409 kb on - strand, within B158DRAFT_0678 at 680.423 kb on + strand, within B158DRAFT_0678 at 680.423 kb on + strand, within B158DRAFT_0678 at 680.441 kb on - strand, within B158DRAFT_0678 at 680.480 kb on - strand, within B158DRAFT_0678 at 680.480 kb on - strand, within B158DRAFT_0678 at 680.480 kb on - strand, within B158DRAFT_0678 at 680.488 kb on - strand, within B158DRAFT_0678 at 680.488 kb on - strand, within B158DRAFT_0678 at 680.531 kb on + strand, within B158DRAFT_0678 at 680.539 kb on - strand, within B158DRAFT_0678 at 680.539 kb on - strand, within B158DRAFT_0678 at 680.566 kb on - strand, within B158DRAFT_0678 at 680.666 kb on + strand, within B158DRAFT_0678 at 680.666 kb on + strand, within B158DRAFT_0678 at 680.666 kb on + strand, within B158DRAFT_0678 at 680.674 kb on - strand, within B158DRAFT_0678 at 680.674 kb on - strand, within B158DRAFT_0678 at 680.674 kb on - strand, within B158DRAFT_0678 at 680.674 kb on - strand, within B158DRAFT_0678 at 680.770 kb on + strand, within B158DRAFT_0678 at 680.771 kb on + strand, within B158DRAFT_0678 at 680.777 kb on + strand, within B158DRAFT_0678 at 680.800 kb on + strand at 680.803 kb on - strand at 680.818 kb on - strand at 680.824 kb on + strand at 680.824 kb on + strand at 680.824 kb on + strand at 680.824 kb on + strand at 680.824 kb on + strand at 680.824 kb on + strand at 680.824 kb on + strand at 680.824 kb on + strand at 680.824 kb on + strand at 680.824 kb on + strand at 680.832 kb on - strand at 680.832 kb on - strand at 680.832 kb on - strand at 680.832 kb on - strand at 680.832 kb on - strand at 680.851 kb on + strand at 680.921 kb on - strand at 680.944 kb on + strand at 680.944 kb on + strand at 680.947 kb on - strand at 680.952 kb on - strand at 680.959 kb on + strand at 680.998 kb on + strand, within B158DRAFT_0679 at 680.998 kb on + strand, within B158DRAFT_0679 at 681.006 kb on - strand, within B158DRAFT_0679 at 681.032 kb on - strand, within B158DRAFT_0679 at 681.094 kb on + strand, within B158DRAFT_0679 at 681.094 kb on + strand, within B158DRAFT_0679 at 681.134 kb on + strand, within B158DRAFT_0679 at 681.200 kb on + strand, within B158DRAFT_0679 at 681.210 kb on + strand, within B158DRAFT_0679 at 681.251 kb on - strand, within B158DRAFT_0679
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 678,944 - B158DRAFT_0676 0.43 +1.3 678,957 + B158DRAFT_0676 0.44 +0.5 678,965 - B158DRAFT_0676 0.45 +1.9 678,965 - B158DRAFT_0676 0.45 +2.2 678,965 - B158DRAFT_0676 0.45 +1.0 678,967 + B158DRAFT_0676 0.45 +0.3 678,967 + B158DRAFT_0676 0.45 +0.2 678,967 + B158DRAFT_0676 0.45 -0.6 678,967 + B158DRAFT_0676 0.45 +1.3 678,975 - B158DRAFT_0676 0.45 +1.2 678,975 - B158DRAFT_0676 0.45 +2.9 679,031 - B158DRAFT_0676 0.49 +0.6 679,052 + B158DRAFT_0676 0.51 +1.4 679,060 - B158DRAFT_0676 0.51 +0.4 679,078 - B158DRAFT_0676 0.52 -0.4 679,108 + B158DRAFT_0676 0.54 +2.4 679,116 + B158DRAFT_0676 0.55 +0.6 679,116 + B158DRAFT_0676 0.55 +2.7 679,116 + B158DRAFT_0676 0.55 -0.7 679,116 + B158DRAFT_0676 0.55 +4.7 679,124 - B158DRAFT_0676 0.55 -0.4 679,138 + B158DRAFT_0676 0.56 +3.2 679,156 - B158DRAFT_0676 0.57 -0.8 679,226 - B158DRAFT_0676 0.62 +3.2 679,291 + B158DRAFT_0676 0.67 +1.9 679,315 + B158DRAFT_0676 0.68 +2.4 679,320 + B158DRAFT_0676 0.68 +1.6 679,320 + B158DRAFT_0676 0.68 +2.3 679,366 + B158DRAFT_0676 0.72 +1.3 679,366 + B158DRAFT_0676 0.72 +3.2 679,366 + B158DRAFT_0676 0.72 +1.7 679,407 - B158DRAFT_0676 0.74 -1.0 679,407 - B158DRAFT_0676 0.74 -0.0 679,412 - B158DRAFT_0676 0.75 +0.9 679,468 + B158DRAFT_0676 0.78 +0.4 679,512 + B158DRAFT_0676 0.81 +0.2 679,512 + B158DRAFT_0676 0.81 +4.7 679,521 - B158DRAFT_0676 0.82 +0.4 679,523 + B158DRAFT_0676 0.82 -0.4 679,523 + B158DRAFT_0676 0.82 +2.2 679,523 + B158DRAFT_0676 0.82 +4.7 679,523 + B158DRAFT_0676 0.82 +0.2 679,531 - B158DRAFT_0676 0.83 +2.9 679,531 - B158DRAFT_0676 0.83 -0.4 679,531 - B158DRAFT_0676 0.83 +1.1 679,531 - B158DRAFT_0676 0.83 +1.2 679,531 - B158DRAFT_0676 0.83 +1.4 679,531 - B158DRAFT_0676 0.83 +1.9 679,531 - B158DRAFT_0676 0.83 -0.7 679,531 - B158DRAFT_0676 0.83 +1.2 679,545 + B158DRAFT_0676 0.84 -0.2 679,581 + B158DRAFT_0676 0.86 +0.7 679,588 + B158DRAFT_0676 0.86 +0.9 679,588 + B158DRAFT_0676 0.86 -1.8 679,593 + B158DRAFT_0676 0.87 -0.3 679,593 + B158DRAFT_0676 0.87 +1.7 679,593 + B158DRAFT_0676 0.87 +1.0 679,596 - B158DRAFT_0676 0.87 +4.7 679,601 - B158DRAFT_0676 0.87 +0.8 679,636 + B158DRAFT_0676 0.90 -0.5 679,657 - +0.0 679,673 + +2.4 679,699 - +2.7 679,709 + -0.4 679,714 + +3.2 679,883 + +1.9 679,884 - +0.3 679,891 - -0.0 679,893 + -2.1 679,946 + -1.3 679,960 + B158DRAFT_0677 0.12 -0.1 679,965 + B158DRAFT_0677 0.13 -0.7 679,990 + B158DRAFT_0677 0.20 -0.3 679,990 + B158DRAFT_0677 0.20 -0.6 679,990 + B158DRAFT_0677 0.20 -0.2 679,990 + B158DRAFT_0677 0.20 -0.2 679,998 - B158DRAFT_0677 0.22 -0.0 680,011 + B158DRAFT_0677 0.25 +0.5 680,110 - B158DRAFT_0677 0.51 -1.5 680,110 - B158DRAFT_0677 0.51 -1.7 680,110 - B158DRAFT_0677 0.51 -0.0 680,163 - B158DRAFT_0677 0.65 -2.4 680,255 - B158DRAFT_0677 0.90 +1.9 680,255 - B158DRAFT_0677 0.90 +1.0 680,262 + +0.3 680,262 + -0.2 680,262 + -1.6 680,270 - +2.4 680,270 - +2.2 680,283 - +1.3 680,283 - +2.4 680,323 - +2.0 680,377 - B158DRAFT_0678 0.10 +3.0 680,409 - B158DRAFT_0678 0.17 +2.0 680,409 - B158DRAFT_0678 0.17 +2.7 680,423 + B158DRAFT_0678 0.20 +2.6 680,423 + B158DRAFT_0678 0.20 +2.9 680,441 - B158DRAFT_0678 0.23 +3.8 680,480 - B158DRAFT_0678 0.31 +2.5 680,480 - B158DRAFT_0678 0.31 +2.7 680,480 - B158DRAFT_0678 0.31 +3.1 680,488 - B158DRAFT_0678 0.32 +2.7 680,488 - B158DRAFT_0678 0.32 +3.4 680,531 + B158DRAFT_0678 0.41 +1.9 680,539 - B158DRAFT_0678 0.42 +2.6 680,539 - B158DRAFT_0678 0.42 +2.3 680,566 - B158DRAFT_0678 0.48 +2.6 680,666 + B158DRAFT_0678 0.67 +2.8 680,666 + B158DRAFT_0678 0.67 +3.4 680,666 + B158DRAFT_0678 0.67 +2.8 680,674 - B158DRAFT_0678 0.69 +3.2 680,674 - B158DRAFT_0678 0.69 +8.4 680,674 - B158DRAFT_0678 0.69 +2.3 680,674 - B158DRAFT_0678 0.69 +2.9 680,770 + B158DRAFT_0678 0.88 +2.7 680,771 + B158DRAFT_0678 0.88 +0.2 680,777 + B158DRAFT_0678 0.89 +1.5 680,800 + -1.3 680,803 - -1.0 680,818 - -0.9 680,824 + -0.9 680,824 + -0.2 680,824 + -1.6 680,824 + -0.2 680,824 + +3.8 680,824 + -0.1 680,824 + -1.8 680,824 + -0.4 680,824 + +0.7 680,824 + -0.4 680,832 - +0.3 680,832 - -0.3 680,832 - -1.1 680,832 - +0.7 680,832 - -0.8 680,851 + +3.3 680,921 - -0.8 680,944 + -1.7 680,944 + -2.3 680,947 - -2.2 680,952 - -2.0 680,959 + +2.7 680,998 + B158DRAFT_0679 0.11 -2.0 680,998 + B158DRAFT_0679 0.11 +0.5 681,006 - B158DRAFT_0679 0.11 +0.6 681,032 - B158DRAFT_0679 0.14 +0.1 681,094 + B158DRAFT_0679 0.21 -0.5 681,094 + B158DRAFT_0679 0.21 -1.7 681,134 + B158DRAFT_0679 0.25 -0.3 681,200 + B158DRAFT_0679 0.32 -0.5 681,210 + B158DRAFT_0679 0.33 -1.8 681,251 - B158DRAFT_0679 0.37 -0.7
Or see this region's nucleotide sequence