Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0629

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0627 and B158DRAFT_0628 overlap by 22 nucleotidesB158DRAFT_0628 and B158DRAFT_0629 overlap by 10 nucleotidesB158DRAFT_0629 and B158DRAFT_0630 are separated by 43 nucleotides B158DRAFT_0627: B158DRAFT_0627 - Cyclopropane fatty acid synthase and related methyltransferases, at 635,862 to 637,181 _0627 B158DRAFT_0628: B158DRAFT_0628 - Protein of unknown function (DUF2878)., at 637,160 to 637,726 _0628 B158DRAFT_0629: B158DRAFT_0629 - Predicted membrane protein, at 637,717 to 638,490 _0629 B158DRAFT_0630: B158DRAFT_0630 - Cyclopropane fatty acid synthase and related methyltransferases, at 638,534 to 639,568 _0630 Position (kb) 637 638 639Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 636.789 kb on + strand, within B158DRAFT_0627at 636.888 kb on - strand, within B158DRAFT_0627at 636.900 kb on - strand, within B158DRAFT_0627at 637.036 kb on + strand, within B158DRAFT_0627at 637.036 kb on + strand, within B158DRAFT_0627at 637.043 kb on - strand, within B158DRAFT_0627at 637.116 kb on + strandat 637.125 kb on - strandat 637.228 kb on + strand, within B158DRAFT_0628at 637.382 kb on - strand, within B158DRAFT_0628at 637.382 kb on - strand, within B158DRAFT_0628at 637.464 kb on + strand, within B158DRAFT_0628at 637.586 kb on + strand, within B158DRAFT_0628at 637.699 kb on + strandat 637.770 kb on + strandat 637.781 kb on + strandat 637.781 kb on + strandat 637.881 kb on - strand, within B158DRAFT_0629at 637.933 kb on - strand, within B158DRAFT_0629at 638.067 kb on - strand, within B158DRAFT_0629at 638.067 kb on - strand, within B158DRAFT_0629at 638.067 kb on - strand, within B158DRAFT_0629at 638.076 kb on + strand, within B158DRAFT_0629at 638.084 kb on - strand, within B158DRAFT_0629at 638.140 kb on - strand, within B158DRAFT_0629at 638.207 kb on - strand, within B158DRAFT_0629at 638.528 kb on + strandat 638.528 kb on + strandat 638.536 kb on - strandat 638.536 kb on - strandat 638.601 kb on + strandat 638.647 kb on - strand, within B158DRAFT_0630at 638.654 kb on - strand, within B158DRAFT_0630at 638.802 kb on - strand, within B158DRAFT_0630at 638.835 kb on + strand, within B158DRAFT_0630at 638.933 kb on - strand, within B158DRAFT_0630at 639.023 kb on - strand, within B158DRAFT_0630at 639.115 kb on + strand, within B158DRAFT_0630at 639.145 kb on + strand, within B158DRAFT_0630at 639.301 kb on - strand, within B158DRAFT_0630at 639.301 kb on - strand, within B158DRAFT_0630at 639.372 kb on + strand, within B158DRAFT_0630at 639.380 kb on - strand, within B158DRAFT_0630at 639.427 kb on + strand, within B158DRAFT_0630at 639.427 kb on + strand, within B158DRAFT_0630at 639.435 kb on - strand, within B158DRAFT_0630

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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636,789 + B158DRAFT_0627 0.70 -0.7
636,888 - B158DRAFT_0627 0.78 +2.6
636,900 - B158DRAFT_0627 0.79 -1.8
637,036 + B158DRAFT_0627 0.89 +0.1
637,036 + B158DRAFT_0627 0.89 -1.0
637,043 - B158DRAFT_0627 0.89 -2.8
637,116 + -0.7
637,125 - +3.8
637,228 + B158DRAFT_0628 0.12 -0.8
637,382 - B158DRAFT_0628 0.39 -0.3
637,382 - B158DRAFT_0628 0.39 -0.5
637,464 + B158DRAFT_0628 0.54 +0.5
637,586 + B158DRAFT_0628 0.75 +0.7
637,699 + -1.1
637,770 + +1.2
637,781 + +1.5
637,781 + -1.0
637,881 - B158DRAFT_0629 0.21 +0.4
637,933 - B158DRAFT_0629 0.28 +0.8
638,067 - B158DRAFT_0629 0.45 -1.7
638,067 - B158DRAFT_0629 0.45 -0.2
638,067 - B158DRAFT_0629 0.45 -0.7
638,076 + B158DRAFT_0629 0.46 +0.2
638,084 - B158DRAFT_0629 0.47 -1.4
638,140 - B158DRAFT_0629 0.55 -0.2
638,207 - B158DRAFT_0629 0.63 -0.7
638,528 + +0.7
638,528 + +0.2
638,536 - +0.0
638,536 - -0.7
638,601 + -0.3
638,647 - B158DRAFT_0630 0.11 -1.9
638,654 - B158DRAFT_0630 0.12 +0.4
638,802 - B158DRAFT_0630 0.26 -0.5
638,835 + B158DRAFT_0630 0.29 -0.9
638,933 - B158DRAFT_0630 0.39 -1.2
639,023 - B158DRAFT_0630 0.47 -0.6
639,115 + B158DRAFT_0630 0.56 -0.5
639,145 + B158DRAFT_0630 0.59 -1.2
639,301 - B158DRAFT_0630 0.74 -0.7
639,301 - B158DRAFT_0630 0.74 -0.4
639,372 + B158DRAFT_0630 0.81 -0.5
639,380 - B158DRAFT_0630 0.82 +0.2
639,427 + B158DRAFT_0630 0.86 -0.9
639,427 + B158DRAFT_0630 0.86 -0.1
639,435 - B158DRAFT_0630 0.87 +0.6

Or see this region's nucleotide sequence