Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0618 and B158DRAFT_0619 are separated by 148 nucleotides B158DRAFT_0619 and B158DRAFT_0620 are separated by 176 nucleotides B158DRAFT_0620 and B158DRAFT_0621 are separated by 28 nucleotides
B158DRAFT_0618: B158DRAFT_0618 - Predicted transcriptional regulators, at 627,670 to 628,251
_0618
B158DRAFT_0619: B158DRAFT_0619 - hypothetical protein, at 628,400 to 628,909
_0619
B158DRAFT_0620: B158DRAFT_0620 - Uncharacterized conserved protein, at 629,086 to 630,033
_0620
B158DRAFT_0621: B158DRAFT_0621 - Deoxyribodipyrimidine photolyase, at 630,062 to 631,441
_0621
Position (kb) 629
630
631 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 628.087 kb on + strand, within B158DRAFT_0618 at 628.123 kb on + strand, within B158DRAFT_0618 at 628.133 kb on + strand, within B158DRAFT_0618 at 628.135 kb on - strand, within B158DRAFT_0618 at 628.198 kb on - strand at 628.506 kb on - strand, within B158DRAFT_0619 at 628.673 kb on - strand, within B158DRAFT_0619 at 628.675 kb on + strand, within B158DRAFT_0619 at 628.937 kb on - strand at 629.029 kb on + strand at 629.037 kb on - strand at 629.037 kb on - strand at 629.037 kb on - strand at 629.179 kb on - strand at 629.192 kb on + strand, within B158DRAFT_0620 at 629.230 kb on + strand, within B158DRAFT_0620 at 629.238 kb on - strand, within B158DRAFT_0620 at 629.252 kb on + strand, within B158DRAFT_0620 at 629.317 kb on - strand, within B158DRAFT_0620 at 629.420 kb on + strand, within B158DRAFT_0620 at 629.421 kb on + strand, within B158DRAFT_0620 at 629.540 kb on + strand, within B158DRAFT_0620 at 629.540 kb on + strand, within B158DRAFT_0620 at 629.540 kb on + strand, within B158DRAFT_0620 at 629.540 kb on + strand, within B158DRAFT_0620 at 629.540 kb on + strand, within B158DRAFT_0620 at 629.548 kb on - strand, within B158DRAFT_0620 at 629.548 kb on - strand, within B158DRAFT_0620 at 629.548 kb on - strand, within B158DRAFT_0620 at 629.548 kb on - strand, within B158DRAFT_0620 at 629.548 kb on - strand, within B158DRAFT_0620 at 629.548 kb on - strand, within B158DRAFT_0620 at 629.990 kb on - strand at 630.143 kb on - strand at 630.145 kb on + strand at 630.174 kb on + strand at 630.174 kb on + strand at 630.182 kb on - strand at 630.184 kb on + strand at 630.184 kb on + strand at 630.184 kb on + strand at 630.293 kb on - strand, within B158DRAFT_0621 at 630.351 kb on - strand, within B158DRAFT_0621 at 630.501 kb on - strand, within B158DRAFT_0621 at 630.507 kb on - strand, within B158DRAFT_0621 at 630.507 kb on - strand, within B158DRAFT_0621 at 630.565 kb on - strand, within B158DRAFT_0621 at 630.590 kb on + strand, within B158DRAFT_0621 at 630.652 kb on + strand, within B158DRAFT_0621 at 630.652 kb on + strand, within B158DRAFT_0621 at 630.660 kb on - strand, within B158DRAFT_0621 at 630.753 kb on - strand, within B158DRAFT_0621 at 630.809 kb on + strand, within B158DRAFT_0621 at 630.837 kb on - strand, within B158DRAFT_0621
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 628,087 + B158DRAFT_0618 0.72 -0.1 628,123 + B158DRAFT_0618 0.78 +0.0 628,133 + B158DRAFT_0618 0.80 +1.6 628,135 - B158DRAFT_0618 0.80 -2.5 628,198 - -1.1 628,506 - B158DRAFT_0619 0.21 +1.5 628,673 - B158DRAFT_0619 0.54 -0.9 628,675 + B158DRAFT_0619 0.54 +0.5 628,937 - -0.6 629,029 + -0.5 629,037 - -2.0 629,037 - -0.4 629,037 - +0.7 629,179 - -0.5 629,192 + B158DRAFT_0620 0.11 +0.5 629,230 + B158DRAFT_0620 0.15 -0.3 629,238 - B158DRAFT_0620 0.16 +1.2 629,252 + B158DRAFT_0620 0.18 -1.4 629,317 - B158DRAFT_0620 0.24 +1.1 629,420 + B158DRAFT_0620 0.35 -0.5 629,421 + B158DRAFT_0620 0.35 -1.2 629,540 + B158DRAFT_0620 0.48 -0.4 629,540 + B158DRAFT_0620 0.48 +0.8 629,540 + B158DRAFT_0620 0.48 -0.3 629,540 + B158DRAFT_0620 0.48 +0.3 629,540 + B158DRAFT_0620 0.48 +0.3 629,548 - B158DRAFT_0620 0.49 -1.0 629,548 - B158DRAFT_0620 0.49 -0.7 629,548 - B158DRAFT_0620 0.49 -1.7 629,548 - B158DRAFT_0620 0.49 -0.5 629,548 - B158DRAFT_0620 0.49 -0.8 629,548 - B158DRAFT_0620 0.49 +0.4 629,990 - -1.0 630,143 - +0.6 630,145 + -0.8 630,174 + -0.4 630,174 + +0.6 630,182 - -0.9 630,184 + -0.7 630,184 + -0.7 630,184 + -2.8 630,293 - B158DRAFT_0621 0.17 -1.0 630,351 - B158DRAFT_0621 0.21 +0.7 630,501 - B158DRAFT_0621 0.32 -0.1 630,507 - B158DRAFT_0621 0.32 +0.7 630,507 - B158DRAFT_0621 0.32 -0.4 630,565 - B158DRAFT_0621 0.36 +0.4 630,590 + B158DRAFT_0621 0.38 -1.1 630,652 + B158DRAFT_0621 0.43 +2.0 630,652 + B158DRAFT_0621 0.43 -0.7 630,660 - B158DRAFT_0621 0.43 +0.6 630,753 - B158DRAFT_0621 0.50 -0.4 630,809 + B158DRAFT_0621 0.54 +0.0 630,837 - B158DRAFT_0621 0.56 -0.3
Or see this region's nucleotide sequence