Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0587

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0585 and B158DRAFT_0586 are separated by 25 nucleotidesB158DRAFT_0586 and B158DRAFT_0587 are separated by 2 nucleotidesB158DRAFT_0587 and B158DRAFT_0588 are separated by 82 nucleotides B158DRAFT_0585: B158DRAFT_0585 - Short-chain alcohol dehydrogenase of unknown specificity, at 590,866 to 591,648 _0585 B158DRAFT_0586: B158DRAFT_0586 - Uncharacterized protein conserved in bacteria, at 591,674 to 592,102 _0586 B158DRAFT_0587: B158DRAFT_0587 - FKBP-type peptidyl-prolyl cis-trans isomerases 2, at 592,105 to 592,587 _0587 B158DRAFT_0588: B158DRAFT_0588 - ribonuclease PH, at 592,670 to 593,386 _0588 Position (kb) 592 593Strain fitness (log2 ratio) -2 -1 0 1 2 3at 591.132 kb on + strand, within B158DRAFT_0585at 591.167 kb on - strand, within B158DRAFT_0585at 591.190 kb on + strand, within B158DRAFT_0585at 591.190 kb on + strand, within B158DRAFT_0585at 591.198 kb on - strand, within B158DRAFT_0585at 591.198 kb on - strand, within B158DRAFT_0585at 591.398 kb on + strand, within B158DRAFT_0585at 591.406 kb on - strand, within B158DRAFT_0585at 591.406 kb on - strand, within B158DRAFT_0585at 591.408 kb on - strand, within B158DRAFT_0585at 591.495 kb on + strand, within B158DRAFT_0585at 591.495 kb on + strand, within B158DRAFT_0585at 591.502 kb on + strand, within B158DRAFT_0585at 591.518 kb on + strand, within B158DRAFT_0585at 591.518 kb on + strand, within B158DRAFT_0585at 591.518 kb on + strand, within B158DRAFT_0585at 591.518 kb on + strand, within B158DRAFT_0585at 591.520 kb on + strand, within B158DRAFT_0585at 591.526 kb on - strand, within B158DRAFT_0585at 591.528 kb on - strand, within B158DRAFT_0585at 591.528 kb on - strand, within B158DRAFT_0585at 591.543 kb on + strand, within B158DRAFT_0585at 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.651 kb on - strandat 591.651 kb on - strandat 591.651 kb on - strandat 591.653 kb on + strandat 591.661 kb on - strandat 591.733 kb on - strand, within B158DRAFT_0586at 591.771 kb on - strand, within B158DRAFT_0586at 591.888 kb on - strand, within B158DRAFT_0586at 591.913 kb on - strand, within B158DRAFT_0586at 591.929 kb on - strand, within B158DRAFT_0586at 591.934 kb on - strand, within B158DRAFT_0586at 591.934 kb on - strand, within B158DRAFT_0586at 591.946 kb on - strand, within B158DRAFT_0586at 592.004 kb on + strand, within B158DRAFT_0586at 592.012 kb on - strand, within B158DRAFT_0586at 592.052 kb on + strand, within B158DRAFT_0586at 592.129 kb on + strandat 592.162 kb on + strand, within B158DRAFT_0587at 592.162 kb on + strand, within B158DRAFT_0587at 592.170 kb on - strand, within B158DRAFT_0587at 592.178 kb on + strand, within B158DRAFT_0587at 592.178 kb on + strand, within B158DRAFT_0587at 592.275 kb on + strand, within B158DRAFT_0587at 592.275 kb on + strand, within B158DRAFT_0587at 592.275 kb on + strand, within B158DRAFT_0587at 592.283 kb on - strand, within B158DRAFT_0587at 592.334 kb on + strand, within B158DRAFT_0587at 592.334 kb on + strand, within B158DRAFT_0587at 592.342 kb on - strand, within B158DRAFT_0587at 592.351 kb on + strand, within B158DRAFT_0587at 592.374 kb on + strand, within B158DRAFT_0587at 592.382 kb on - strand, within B158DRAFT_0587at 592.382 kb on - strand, within B158DRAFT_0587at 592.382 kb on - strand, within B158DRAFT_0587at 592.389 kb on - strand, within B158DRAFT_0587at 592.390 kb on - strand, within B158DRAFT_0587at 592.421 kb on + strand, within B158DRAFT_0587at 592.448 kb on + strand, within B158DRAFT_0587at 592.473 kb on + strand, within B158DRAFT_0587at 592.473 kb on + strand, within B158DRAFT_0587at 592.473 kb on + strand, within B158DRAFT_0587at 592.528 kb on + strand, within B158DRAFT_0587at 592.660 kb on + strandat 592.660 kb on + strandat 592.668 kb on - strandat 592.755 kb on + strand, within B158DRAFT_0588at 592.978 kb on + strand, within B158DRAFT_0588at 592.986 kb on - strand, within B158DRAFT_0588at 593.130 kb on + strand, within B158DRAFT_0588at 593.162 kb on + strand, within B158DRAFT_0588at 593.162 kb on + strand, within B158DRAFT_0588at 593.170 kb on - strand, within B158DRAFT_0588at 593.176 kb on + strand, within B158DRAFT_0588at 593.184 kb on - strand, within B158DRAFT_0588at 593.205 kb on + strand, within B158DRAFT_0588at 593.213 kb on - strand, within B158DRAFT_0588at 593.213 kb on - strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.216 kb on + strand, within B158DRAFT_0588at 593.219 kb on - strand, within B158DRAFT_0588at 593.224 kb on - strand, within B158DRAFT_0588at 593.224 kb on - strand, within B158DRAFT_0588at 593.224 kb on - strand, within B158DRAFT_0588at 593.224 kb on - strand, within B158DRAFT_0588at 593.224 kb on - strand, within B158DRAFT_0588at 593.224 kb on - strand, within B158DRAFT_0588at 593.224 kb on - strand, within B158DRAFT_0588at 593.224 kb on - strand, within B158DRAFT_0588at 593.224 kb on - strand, within B158DRAFT_0588at 593.224 kb on - strand, within B158DRAFT_0588at 593.224 kb on - strand, within B158DRAFT_0588at 593.224 kb on - strand, within B158DRAFT_0588at 593.224 kb on - strand, within B158DRAFT_0588at 593.224 kb on - strand, within B158DRAFT_0588at 593.224 kb on - strand, within B158DRAFT_0588at 593.240 kb on + strand, within B158DRAFT_0588at 593.240 kb on + strand, within B158DRAFT_0588at 593.248 kb on - strand, within B158DRAFT_0588at 593.248 kb on - strand, within B158DRAFT_0588at 593.250 kb on + strand, within B158DRAFT_0588at 593.250 kb on + strand, within B158DRAFT_0588at 593.250 kb on + strand, within B158DRAFT_0588at 593.250 kb on + strand, within B158DRAFT_0588at 593.258 kb on - strand, within B158DRAFT_0588at 593.258 kb on - strand, within B158DRAFT_0588at 593.276 kb on - strand, within B158DRAFT_0588at 593.302 kb on + strand, within B158DRAFT_0588at 593.302 kb on + strand, within B158DRAFT_0588at 593.302 kb on + strand, within B158DRAFT_0588at 593.305 kb on - strand, within B158DRAFT_0588at 593.310 kb on - strand, within B158DRAFT_0588at 593.310 kb on - strand, within B158DRAFT_0588at 593.310 kb on - strand, within B158DRAFT_0588at 593.310 kb on - strand, within B158DRAFT_0588at 593.408 kb on + strandat 593.408 kb on + strandat 593.416 kb on - strandat 593.416 kb on - strandat 593.418 kb on + strandat 593.469 kb on - strandat 593.474 kb on + strandat 593.475 kb on - strandat 593.482 kb on - strandat 593.482 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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591,132 + B158DRAFT_0585 0.34 +0.3
591,167 - B158DRAFT_0585 0.38 +0.3
591,190 + B158DRAFT_0585 0.41 +3.1
591,190 + B158DRAFT_0585 0.41 +1.4
591,198 - B158DRAFT_0585 0.42 +0.2
591,198 - B158DRAFT_0585 0.42 +1.2
591,398 + B158DRAFT_0585 0.68 -1.6
591,406 - B158DRAFT_0585 0.69 +0.3
591,406 - B158DRAFT_0585 0.69 +0.2
591,408 - B158DRAFT_0585 0.69 -0.1
591,495 + B158DRAFT_0585 0.80 -1.4
591,495 + B158DRAFT_0585 0.80 +2.6
591,502 + B158DRAFT_0585 0.81 -0.5
591,518 + B158DRAFT_0585 0.83 +1.3
591,518 + B158DRAFT_0585 0.83 -1.8
591,518 + B158DRAFT_0585 0.83 -0.4
591,518 + B158DRAFT_0585 0.83 +1.0
591,520 + B158DRAFT_0585 0.84 +1.7
591,526 - B158DRAFT_0585 0.84 +2.0
591,528 - B158DRAFT_0585 0.85 -0.6
591,528 - B158DRAFT_0585 0.85 -0.5
591,543 + B158DRAFT_0585 0.86 +0.3
591,609 + -0.1
591,609 + -1.3
591,609 + +0.2
591,609 + +0.3
591,609 + +3.2
591,609 + +0.2
591,609 + +0.9
591,609 + -1.1
591,609 + +1.0
591,609 + -1.3
591,609 + -1.3
591,609 + +1.0
591,609 + -0.8
591,609 + +0.1
591,609 + -0.3
591,609 + -0.2
591,609 + -0.0
591,609 + +0.7
591,609 + -0.2
591,609 + +0.4
591,617 - +1.8
591,617 - -0.4
591,617 - +0.4
591,617 - +0.6
591,617 - -0.2
591,617 - +1.7
591,617 - +2.5
591,617 - +0.0
591,617 - +0.3
591,617 - -1.2
591,617 - -0.5
591,617 - -0.3
591,617 - -0.9
591,617 - +0.3
591,617 - +2.0
591,617 - -0.7
591,651 - +0.4
591,651 - -0.5
591,651 - -0.7
591,653 + +1.9
591,661 - -0.9
591,733 - B158DRAFT_0586 0.14 -0.0
591,771 - B158DRAFT_0586 0.23 +0.4
591,888 - B158DRAFT_0586 0.50 -0.9
591,913 - B158DRAFT_0586 0.56 +1.7
591,929 - B158DRAFT_0586 0.59 -0.8
591,934 - B158DRAFT_0586 0.61 -1.5
591,934 - B158DRAFT_0586 0.61 -0.9
591,946 - B158DRAFT_0586 0.63 +0.4
592,004 + B158DRAFT_0586 0.77 -0.1
592,012 - B158DRAFT_0586 0.79 +0.8
592,052 + B158DRAFT_0586 0.88 -1.8
592,129 + +0.1
592,162 + B158DRAFT_0587 0.12 -1.1
592,162 + B158DRAFT_0587 0.12 -0.9
592,170 - B158DRAFT_0587 0.13 -0.9
592,178 + B158DRAFT_0587 0.15 -0.2
592,178 + B158DRAFT_0587 0.15 +0.3
592,275 + B158DRAFT_0587 0.35 +0.3
592,275 + B158DRAFT_0587 0.35 +3.2
592,275 + B158DRAFT_0587 0.35 -0.3
592,283 - B158DRAFT_0587 0.37 -1.0
592,334 + B158DRAFT_0587 0.47 +0.8
592,334 + B158DRAFT_0587 0.47 -0.5
592,342 - B158DRAFT_0587 0.49 -2.1
592,351 + B158DRAFT_0587 0.51 -0.2
592,374 + B158DRAFT_0587 0.56 +0.6
592,382 - B158DRAFT_0587 0.57 +2.0
592,382 - B158DRAFT_0587 0.57 -1.3
592,382 - B158DRAFT_0587 0.57 -0.1
592,389 - B158DRAFT_0587 0.59 +1.1
592,390 - B158DRAFT_0587 0.59 -0.1
592,421 + B158DRAFT_0587 0.65 -1.0
592,448 + B158DRAFT_0587 0.71 +0.8
592,473 + B158DRAFT_0587 0.76 -0.4
592,473 + B158DRAFT_0587 0.76 +0.5
592,473 + B158DRAFT_0587 0.76 -0.5
592,528 + B158DRAFT_0587 0.88 -0.6
592,660 + -0.4
592,660 + +0.2
592,668 - +0.4
592,755 + B158DRAFT_0588 0.12 +1.1
592,978 + B158DRAFT_0588 0.43 +0.3
592,986 - B158DRAFT_0588 0.44 +2.5
593,130 + B158DRAFT_0588 0.64 -1.8
593,162 + B158DRAFT_0588 0.69 -1.1
593,162 + B158DRAFT_0588 0.69 -1.8
593,170 - B158DRAFT_0588 0.70 +0.1
593,176 + B158DRAFT_0588 0.71 +0.2
593,184 - B158DRAFT_0588 0.72 -1.8
593,205 + B158DRAFT_0588 0.75 -0.4
593,213 - B158DRAFT_0588 0.76 +1.9
593,213 - B158DRAFT_0588 0.76 -1.7
593,216 + B158DRAFT_0588 0.76 +0.5
593,216 + B158DRAFT_0588 0.76 +0.5
593,216 + B158DRAFT_0588 0.76 -0.9
593,216 + B158DRAFT_0588 0.76 +0.4
593,216 + B158DRAFT_0588 0.76 +1.1
593,216 + B158DRAFT_0588 0.76 -0.4
593,216 + B158DRAFT_0588 0.76 +0.5
593,216 + B158DRAFT_0588 0.76 +0.5
593,216 + B158DRAFT_0588 0.76 +1.9
593,216 + B158DRAFT_0588 0.76 -0.6
593,216 + B158DRAFT_0588 0.76 -0.2
593,216 + B158DRAFT_0588 0.76 -0.7
593,216 + B158DRAFT_0588 0.76 +0.5
593,216 + B158DRAFT_0588 0.76 +1.8
593,216 + B158DRAFT_0588 0.76 +0.5
593,216 + B158DRAFT_0588 0.76 +0.7
593,216 + B158DRAFT_0588 0.76 -1.5
593,216 + B158DRAFT_0588 0.76 -0.2
593,216 + B158DRAFT_0588 0.76 +0.7
593,216 + B158DRAFT_0588 0.76 -0.1
593,216 + B158DRAFT_0588 0.76 +2.0
593,216 + B158DRAFT_0588 0.76 +0.2
593,216 + B158DRAFT_0588 0.76 +0.5
593,216 + B158DRAFT_0588 0.76 -0.3
593,216 + B158DRAFT_0588 0.76 -0.6
593,216 + B158DRAFT_0588 0.76 -0.4
593,219 - B158DRAFT_0588 0.77 +1.8
593,224 - B158DRAFT_0588 0.77 +2.2
593,224 - B158DRAFT_0588 0.77 -0.0
593,224 - B158DRAFT_0588 0.77 +0.1
593,224 - B158DRAFT_0588 0.77 +1.4
593,224 - B158DRAFT_0588 0.77 -0.2
593,224 - B158DRAFT_0588 0.77 +0.0
593,224 - B158DRAFT_0588 0.77 -0.7
593,224 - B158DRAFT_0588 0.77 +0.7
593,224 - B158DRAFT_0588 0.77 +1.4
593,224 - B158DRAFT_0588 0.77 -0.4
593,224 - B158DRAFT_0588 0.77 +0.6
593,224 - B158DRAFT_0588 0.77 +0.2
593,224 - B158DRAFT_0588 0.77 -0.6
593,224 - B158DRAFT_0588 0.77 +0.1
593,224 - B158DRAFT_0588 0.77 -0.9
593,240 + B158DRAFT_0588 0.79 -0.1
593,240 + B158DRAFT_0588 0.79 -0.2
593,248 - B158DRAFT_0588 0.81 +1.1
593,248 - B158DRAFT_0588 0.81 -0.3
593,250 + B158DRAFT_0588 0.81 -0.3
593,250 + B158DRAFT_0588 0.81 -0.7
593,250 + B158DRAFT_0588 0.81 +0.2
593,250 + B158DRAFT_0588 0.81 -0.2
593,258 - B158DRAFT_0588 0.82 -0.9
593,258 - B158DRAFT_0588 0.82 +0.1
593,276 - B158DRAFT_0588 0.85 +0.2
593,302 + B158DRAFT_0588 0.88 +2.1
593,302 + B158DRAFT_0588 0.88 +2.1
593,302 + B158DRAFT_0588 0.88 -1.0
593,305 - B158DRAFT_0588 0.89 -0.3
593,310 - B158DRAFT_0588 0.89 -1.5
593,310 - B158DRAFT_0588 0.89 -1.1
593,310 - B158DRAFT_0588 0.89 +0.8
593,310 - B158DRAFT_0588 0.89 +1.3
593,408 + -0.2
593,408 + -0.5
593,416 - +0.8
593,416 - -2.5
593,418 + -0.4
593,469 - +0.2
593,474 + -1.2
593,475 - +0.2
593,482 - -0.7
593,482 - +0.0

Or see this region's nucleotide sequence