Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0582

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0581 and B158DRAFT_0582 are separated by 61 nucleotidesB158DRAFT_0582 and B158DRAFT_0583 are separated by 125 nucleotidesB158DRAFT_0583 and B158DRAFT_0584 are separated by 5 nucleotides B158DRAFT_0581: B158DRAFT_0581 - transcriptional regulator, LysR family, at 587,528 to 588,403 _0581 B158DRAFT_0582: B158DRAFT_0582 - TIGR00255 family protein, at 588,465 to 589,331 _0582 B158DRAFT_0583: B158DRAFT_0583 - Bis(5'nucleosyl)-tetraphosphatase, ApaH, at 589,457 to 590,266 _0583 B158DRAFT_0584: B158DRAFT_0584 - Uncharacterized protein affecting Mg2+/Co2+ transport, at 590,272 to 590,649 _0584 Position (kb) 588 589 590Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 587.560 kb on + strandat 587.579 kb on - strandat 587.585 kb on + strandat 587.585 kb on + strandat 587.697 kb on + strand, within B158DRAFT_0581at 587.765 kb on + strand, within B158DRAFT_0581at 587.810 kb on - strand, within B158DRAFT_0581at 587.828 kb on + strand, within B158DRAFT_0581at 587.836 kb on - strand, within B158DRAFT_0581at 587.934 kb on - strand, within B158DRAFT_0581at 588.000 kb on + strand, within B158DRAFT_0581at 588.000 kb on + strand, within B158DRAFT_0581at 588.002 kb on - strand, within B158DRAFT_0581at 588.008 kb on - strand, within B158DRAFT_0581at 588.008 kb on - strand, within B158DRAFT_0581at 588.008 kb on - strand, within B158DRAFT_0581at 588.047 kb on - strand, within B158DRAFT_0581at 588.149 kb on + strand, within B158DRAFT_0581at 588.184 kb on + strand, within B158DRAFT_0581at 588.189 kb on + strand, within B158DRAFT_0581at 588.189 kb on + strand, within B158DRAFT_0581at 588.197 kb on - strand, within B158DRAFT_0581at 588.197 kb on - strand, within B158DRAFT_0581at 588.197 kb on - strand, within B158DRAFT_0581at 588.197 kb on - strand, within B158DRAFT_0581at 588.227 kb on - strand, within B158DRAFT_0581at 588.232 kb on + strand, within B158DRAFT_0581at 588.240 kb on - strand, within B158DRAFT_0581at 588.243 kb on + strand, within B158DRAFT_0581at 588.243 kb on + strand, within B158DRAFT_0581at 588.243 kb on + strand, within B158DRAFT_0581at 588.243 kb on + strand, within B158DRAFT_0581at 588.282 kb on - strand, within B158DRAFT_0581at 588.321 kb on - strandat 588.321 kb on - strandat 588.323 kb on + strandat 588.405 kb on + strandat 588.413 kb on - strandat 588.433 kb on - strandat 588.482 kb on - strandat 588.625 kb on + strand, within B158DRAFT_0582at 588.661 kb on + strand, within B158DRAFT_0582at 588.661 kb on + strand, within B158DRAFT_0582at 588.730 kb on - strand, within B158DRAFT_0582at 588.830 kb on + strand, within B158DRAFT_0582at 588.920 kb on - strand, within B158DRAFT_0582at 588.923 kb on + strand, within B158DRAFT_0582at 588.923 kb on + strand, within B158DRAFT_0582at 588.939 kb on - strand, within B158DRAFT_0582at 588.980 kb on + strand, within B158DRAFT_0582at 589.012 kb on - strand, within B158DRAFT_0582at 589.013 kb on + strand, within B158DRAFT_0582at 589.013 kb on + strand, within B158DRAFT_0582at 589.021 kb on - strand, within B158DRAFT_0582at 589.021 kb on - strand, within B158DRAFT_0582at 589.021 kb on - strand, within B158DRAFT_0582at 589.021 kb on - strand, within B158DRAFT_0582at 589.021 kb on - strand, within B158DRAFT_0582at 589.032 kb on - strand, within B158DRAFT_0582at 589.093 kb on + strand, within B158DRAFT_0582at 589.136 kb on + strand, within B158DRAFT_0582at 589.136 kb on + strand, within B158DRAFT_0582at 589.138 kb on + strand, within B158DRAFT_0582at 589.144 kb on - strand, within B158DRAFT_0582at 589.144 kb on - strand, within B158DRAFT_0582at 589.146 kb on - strand, within B158DRAFT_0582at 589.155 kb on - strand, within B158DRAFT_0582at 589.170 kb on + strand, within B158DRAFT_0582at 589.170 kb on + strand, within B158DRAFT_0582at 589.175 kb on + strand, within B158DRAFT_0582at 589.175 kb on + strand, within B158DRAFT_0582at 589.175 kb on + strand, within B158DRAFT_0582at 589.175 kb on + strand, within B158DRAFT_0582at 589.175 kb on + strand, within B158DRAFT_0582at 589.177 kb on + strand, within B158DRAFT_0582at 589.183 kb on - strand, within B158DRAFT_0582at 589.183 kb on - strand, within B158DRAFT_0582at 589.183 kb on - strand, within B158DRAFT_0582at 589.183 kb on - strand, within B158DRAFT_0582at 589.183 kb on - strand, within B158DRAFT_0582at 589.185 kb on - strand, within B158DRAFT_0582at 589.202 kb on + strand, within B158DRAFT_0582at 589.210 kb on + strand, within B158DRAFT_0582at 589.227 kb on - strand, within B158DRAFT_0582at 589.273 kb on + strandat 589.276 kb on - strandat 589.277 kb on - strandat 589.278 kb on + strandat 589.278 kb on + strandat 589.286 kb on - strandat 589.418 kb on - strandat 589.432 kb on + strandat 589.440 kb on - strandat 589.440 kb on - strandat 589.457 kb on + strandat 589.457 kb on + strandat 589.458 kb on - strandat 589.465 kb on - strandat 589.465 kb on - strandat 589.509 kb on - strandat 589.557 kb on + strand, within B158DRAFT_0583at 589.557 kb on + strand, within B158DRAFT_0583at 589.640 kb on + strand, within B158DRAFT_0583at 589.671 kb on + strand, within B158DRAFT_0583at 589.721 kb on + strand, within B158DRAFT_0583at 589.721 kb on + strand, within B158DRAFT_0583at 589.726 kb on + strand, within B158DRAFT_0583at 589.734 kb on - strand, within B158DRAFT_0583at 589.734 kb on - strand, within B158DRAFT_0583at 589.758 kb on + strand, within B158DRAFT_0583at 589.788 kb on - strand, within B158DRAFT_0583at 589.788 kb on - strand, within B158DRAFT_0583at 589.788 kb on - strand, within B158DRAFT_0583at 589.788 kb on - strand, within B158DRAFT_0583at 589.794 kb on + strand, within B158DRAFT_0583at 589.865 kb on + strand, within B158DRAFT_0583at 589.873 kb on - strand, within B158DRAFT_0583at 589.873 kb on - strand, within B158DRAFT_0583at 589.873 kb on - strand, within B158DRAFT_0583at 589.919 kb on - strand, within B158DRAFT_0583at 589.993 kb on - strand, within B158DRAFT_0583at 590.040 kb on + strand, within B158DRAFT_0583at 590.083 kb on - strand, within B158DRAFT_0583at 590.125 kb on - strand, within B158DRAFT_0583at 590.183 kb on - strand, within B158DRAFT_0583at 590.185 kb on - strand, within B158DRAFT_0583at 590.195 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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587,560 + -1.1
587,579 - -0.0
587,585 + +0.5
587,585 + -0.2
587,697 + B158DRAFT_0581 0.19 +0.1
587,765 + B158DRAFT_0581 0.27 +1.1
587,810 - B158DRAFT_0581 0.32 +0.3
587,828 + B158DRAFT_0581 0.34 -0.4
587,836 - B158DRAFT_0581 0.35 -0.5
587,934 - B158DRAFT_0581 0.46 -1.7
588,000 + B158DRAFT_0581 0.54 -0.5
588,000 + B158DRAFT_0581 0.54 +0.2
588,002 - B158DRAFT_0581 0.54 -0.4
588,008 - B158DRAFT_0581 0.55 -0.7
588,008 - B158DRAFT_0581 0.55 -1.4
588,008 - B158DRAFT_0581 0.55 -1.1
588,047 - B158DRAFT_0581 0.59 -0.6
588,149 + B158DRAFT_0581 0.71 +0.9
588,184 + B158DRAFT_0581 0.75 +0.5
588,189 + B158DRAFT_0581 0.75 +0.9
588,189 + B158DRAFT_0581 0.75 +0.1
588,197 - B158DRAFT_0581 0.76 -0.6
588,197 - B158DRAFT_0581 0.76 -0.1
588,197 - B158DRAFT_0581 0.76 -0.3
588,197 - B158DRAFT_0581 0.76 +0.7
588,227 - B158DRAFT_0581 0.80 -0.6
588,232 + B158DRAFT_0581 0.80 -0.3
588,240 - B158DRAFT_0581 0.81 -1.3
588,243 + B158DRAFT_0581 0.82 +0.7
588,243 + B158DRAFT_0581 0.82 -0.1
588,243 + B158DRAFT_0581 0.82 -1.0
588,243 + B158DRAFT_0581 0.82 -0.1
588,282 - B158DRAFT_0581 0.86 -0.5
588,321 - +0.1
588,321 - -0.2
588,323 + -2.5
588,405 + +0.5
588,413 - -1.3
588,433 - -1.0
588,482 - -0.6
588,625 + B158DRAFT_0582 0.18 +0.7
588,661 + B158DRAFT_0582 0.23 +4.0
588,661 + B158DRAFT_0582 0.23 +0.4
588,730 - B158DRAFT_0582 0.31 +0.8
588,830 + B158DRAFT_0582 0.42 +1.0
588,920 - B158DRAFT_0582 0.52 +3.2
588,923 + B158DRAFT_0582 0.53 +1.3
588,923 + B158DRAFT_0582 0.53 +0.3
588,939 - B158DRAFT_0582 0.55 -1.2
588,980 + B158DRAFT_0582 0.59 +1.8
589,012 - B158DRAFT_0582 0.63 +1.3
589,013 + B158DRAFT_0582 0.63 +0.6
589,013 + B158DRAFT_0582 0.63 +0.6
589,021 - B158DRAFT_0582 0.64 +1.3
589,021 - B158DRAFT_0582 0.64 +2.5
589,021 - B158DRAFT_0582 0.64 -1.5
589,021 - B158DRAFT_0582 0.64 +3.4
589,021 - B158DRAFT_0582 0.64 +0.6
589,032 - B158DRAFT_0582 0.65 +1.2
589,093 + B158DRAFT_0582 0.72 +1.7
589,136 + B158DRAFT_0582 0.77 -0.1
589,136 + B158DRAFT_0582 0.77 +1.5
589,138 + B158DRAFT_0582 0.78 +1.3
589,144 - B158DRAFT_0582 0.78 +0.2
589,144 - B158DRAFT_0582 0.78 +0.4
589,146 - B158DRAFT_0582 0.79 +1.2
589,155 - B158DRAFT_0582 0.80 +0.6
589,170 + B158DRAFT_0582 0.81 +2.0
589,170 + B158DRAFT_0582 0.81 +1.1
589,175 + B158DRAFT_0582 0.82 -0.5
589,175 + B158DRAFT_0582 0.82 -0.0
589,175 + B158DRAFT_0582 0.82 +0.9
589,175 + B158DRAFT_0582 0.82 +1.4
589,175 + B158DRAFT_0582 0.82 -0.4
589,177 + B158DRAFT_0582 0.82 +0.4
589,183 - B158DRAFT_0582 0.83 +0.2
589,183 - B158DRAFT_0582 0.83 +3.1
589,183 - B158DRAFT_0582 0.83 +0.7
589,183 - B158DRAFT_0582 0.83 -0.3
589,183 - B158DRAFT_0582 0.83 +0.3
589,185 - B158DRAFT_0582 0.83 +0.2
589,202 + B158DRAFT_0582 0.85 +0.5
589,210 + B158DRAFT_0582 0.86 +2.9
589,227 - B158DRAFT_0582 0.88 +1.1
589,273 + +0.4
589,276 - -1.1
589,277 - +0.4
589,278 + +1.7
589,278 + +0.3
589,286 - +4.0
589,418 - +1.5
589,432 + -0.1
589,440 - -0.2
589,440 - +1.8
589,457 + -1.1
589,457 + -0.6
589,458 - -0.8
589,465 - -0.3
589,465 - +0.3
589,509 - -0.1
589,557 + B158DRAFT_0583 0.12 -0.4
589,557 + B158DRAFT_0583 0.12 +0.5
589,640 + B158DRAFT_0583 0.23 +0.0
589,671 + B158DRAFT_0583 0.26 -1.9
589,721 + B158DRAFT_0583 0.33 +0.2
589,721 + B158DRAFT_0583 0.33 -0.6
589,726 + B158DRAFT_0583 0.33 -0.1
589,734 - B158DRAFT_0583 0.34 +0.5
589,734 - B158DRAFT_0583 0.34 -0.2
589,758 + B158DRAFT_0583 0.37 -1.7
589,788 - B158DRAFT_0583 0.41 +0.7
589,788 - B158DRAFT_0583 0.41 +0.2
589,788 - B158DRAFT_0583 0.41 -1.7
589,788 - B158DRAFT_0583 0.41 +0.6
589,794 + B158DRAFT_0583 0.42 +0.0
589,865 + B158DRAFT_0583 0.50 +1.2
589,873 - B158DRAFT_0583 0.51 +0.5
589,873 - B158DRAFT_0583 0.51 -0.0
589,873 - B158DRAFT_0583 0.51 -0.5
589,919 - B158DRAFT_0583 0.57 -0.6
589,993 - B158DRAFT_0583 0.66 -1.4
590,040 + B158DRAFT_0583 0.72 +0.5
590,083 - B158DRAFT_0583 0.77 -1.4
590,125 - B158DRAFT_0583 0.82 -1.5
590,183 - B158DRAFT_0583 0.90 -0.3
590,185 - B158DRAFT_0583 0.90 -0.0
590,195 - -0.3

Or see this region's nucleotide sequence