Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0536

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0535 and B158DRAFT_0536 are separated by 49 nucleotidesB158DRAFT_0536 and B158DRAFT_0537 overlap by 14 nucleotides B158DRAFT_0535: B158DRAFT_0535 - hypothetical protein, at 541,391 to 542,353 _0535 B158DRAFT_0536: B158DRAFT_0536 - hypothetical protein, at 542,403 to 543,242 _0536 B158DRAFT_0537: B158DRAFT_0537 - Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family, at 543,229 to 544,422 _0537 Position (kb) 542 543 544Strain fitness (log2 ratio) -2 -1 0 1 2at 541.481 kb on - strandat 541.483 kb on + strandat 541.491 kb on - strand, within B158DRAFT_0535at 541.497 kb on + strand, within B158DRAFT_0535at 541.497 kb on - strand, within B158DRAFT_0535at 541.505 kb on - strand, within B158DRAFT_0535at 541.521 kb on - strand, within B158DRAFT_0535at 541.566 kb on + strand, within B158DRAFT_0535at 541.566 kb on + strand, within B158DRAFT_0535at 541.574 kb on - strand, within B158DRAFT_0535at 541.614 kb on - strand, within B158DRAFT_0535at 541.623 kb on + strand, within B158DRAFT_0535at 541.623 kb on + strand, within B158DRAFT_0535at 541.623 kb on + strand, within B158DRAFT_0535at 541.623 kb on + strand, within B158DRAFT_0535at 541.623 kb on + strand, within B158DRAFT_0535at 541.626 kb on - strand, within B158DRAFT_0535at 541.631 kb on - strand, within B158DRAFT_0535at 541.631 kb on - strand, within B158DRAFT_0535at 541.631 kb on - strand, within B158DRAFT_0535at 541.631 kb on - strand, within B158DRAFT_0535at 541.631 kb on - strand, within B158DRAFT_0535at 541.631 kb on - strand, within B158DRAFT_0535at 541.631 kb on - strand, within B158DRAFT_0535at 541.631 kb on - strand, within B158DRAFT_0535at 541.647 kb on + strand, within B158DRAFT_0535at 541.647 kb on + strand, within B158DRAFT_0535at 541.655 kb on - strand, within B158DRAFT_0535at 541.891 kb on + strand, within B158DRAFT_0535at 541.891 kb on + strand, within B158DRAFT_0535at 541.913 kb on + strand, within B158DRAFT_0535at 541.945 kb on + strand, within B158DRAFT_0535at 541.953 kb on - strand, within B158DRAFT_0535at 541.954 kb on - strand, within B158DRAFT_0535at 541.981 kb on - strand, within B158DRAFT_0535at 541.981 kb on - strand, within B158DRAFT_0535at 542.061 kb on - strand, within B158DRAFT_0535at 542.083 kb on - strand, within B158DRAFT_0535at 542.089 kb on + strand, within B158DRAFT_0535at 542.197 kb on + strand, within B158DRAFT_0535at 542.274 kb on - strandat 542.290 kb on - strandat 542.323 kb on + strandat 542.343 kb on + strandat 542.448 kb on + strandat 542.449 kb on + strandat 542.465 kb on + strandat 542.524 kb on - strand, within B158DRAFT_0536at 542.540 kb on + strand, within B158DRAFT_0536at 542.548 kb on + strand, within B158DRAFT_0536at 542.548 kb on - strand, within B158DRAFT_0536at 542.548 kb on - strand, within B158DRAFT_0536at 542.548 kb on - strand, within B158DRAFT_0536at 542.555 kb on + strand, within B158DRAFT_0536at 542.556 kb on - strand, within B158DRAFT_0536at 542.563 kb on - strand, within B158DRAFT_0536at 542.563 kb on - strand, within B158DRAFT_0536at 542.575 kb on - strand, within B158DRAFT_0536at 542.601 kb on + strand, within B158DRAFT_0536at 542.615 kb on - strand, within B158DRAFT_0536at 542.616 kb on - strand, within B158DRAFT_0536at 542.728 kb on + strand, within B158DRAFT_0536at 542.736 kb on - strand, within B158DRAFT_0536at 542.743 kb on + strand, within B158DRAFT_0536at 542.743 kb on + strand, within B158DRAFT_0536at 542.786 kb on + strand, within B158DRAFT_0536at 542.794 kb on - strand, within B158DRAFT_0536at 542.823 kb on + strand, within B158DRAFT_0536at 542.838 kb on + strand, within B158DRAFT_0536at 542.838 kb on + strand, within B158DRAFT_0536at 542.935 kb on + strand, within B158DRAFT_0536at 542.935 kb on + strand, within B158DRAFT_0536at 542.935 kb on + strand, within B158DRAFT_0536at 542.935 kb on + strand, within B158DRAFT_0536at 542.935 kb on + strand, within B158DRAFT_0536at 542.943 kb on - strand, within B158DRAFT_0536at 542.943 kb on - strand, within B158DRAFT_0536at 542.943 kb on - strand, within B158DRAFT_0536at 542.943 kb on - strand, within B158DRAFT_0536at 542.945 kb on + strand, within B158DRAFT_0536at 542.945 kb on + strand, within B158DRAFT_0536at 542.945 kb on + strand, within B158DRAFT_0536at 542.953 kb on - strand, within B158DRAFT_0536at 542.953 kb on - strand, within B158DRAFT_0536at 542.969 kb on + strand, within B158DRAFT_0536at 543.089 kb on - strand, within B158DRAFT_0536at 543.130 kb on + strand, within B158DRAFT_0536at 543.211 kb on + strandat 543.211 kb on + strandat 543.237 kb on + strandat 543.237 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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541,481 - -0.1
541,483 + -1.0
541,491 - B158DRAFT_0535 0.10 +1.0
541,497 + B158DRAFT_0535 0.11 +1.9
541,497 - B158DRAFT_0535 0.11 -0.4
541,505 - B158DRAFT_0535 0.12 +0.7
541,521 - B158DRAFT_0535 0.13 +1.8
541,566 + B158DRAFT_0535 0.18 -0.2
541,566 + B158DRAFT_0535 0.18 -0.4
541,574 - B158DRAFT_0535 0.19 -0.7
541,614 - B158DRAFT_0535 0.23 +2.2
541,623 + B158DRAFT_0535 0.24 +0.0
541,623 + B158DRAFT_0535 0.24 -1.1
541,623 + B158DRAFT_0535 0.24 -1.8
541,623 + B158DRAFT_0535 0.24 +0.3
541,623 + B158DRAFT_0535 0.24 -0.8
541,626 - B158DRAFT_0535 0.24 -1.4
541,631 - B158DRAFT_0535 0.25 -1.7
541,631 - B158DRAFT_0535 0.25 -0.7
541,631 - B158DRAFT_0535 0.25 +0.2
541,631 - B158DRAFT_0535 0.25 +0.1
541,631 - B158DRAFT_0535 0.25 +0.5
541,631 - B158DRAFT_0535 0.25 -0.8
541,631 - B158DRAFT_0535 0.25 -1.1
541,631 - B158DRAFT_0535 0.25 -0.3
541,647 + B158DRAFT_0535 0.27 +1.6
541,647 + B158DRAFT_0535 0.27 -0.5
541,655 - B158DRAFT_0535 0.27 +2.7
541,891 + B158DRAFT_0535 0.52 -0.9
541,891 + B158DRAFT_0535 0.52 +0.9
541,913 + B158DRAFT_0535 0.54 +0.8
541,945 + B158DRAFT_0535 0.58 +1.2
541,953 - B158DRAFT_0535 0.58 +0.4
541,954 - B158DRAFT_0535 0.58 -1.3
541,981 - B158DRAFT_0535 0.61 +1.1
541,981 - B158DRAFT_0535 0.61 +0.5
542,061 - B158DRAFT_0535 0.70 -1.0
542,083 - B158DRAFT_0535 0.72 -0.8
542,089 + B158DRAFT_0535 0.72 -0.1
542,197 + B158DRAFT_0535 0.84 +0.2
542,274 - +0.7
542,290 - -0.2
542,323 + -1.9
542,343 + -0.5
542,448 + +1.2
542,449 + +1.3
542,465 + -0.3
542,524 - B158DRAFT_0536 0.14 -1.9
542,540 + B158DRAFT_0536 0.16 +1.2
542,548 + B158DRAFT_0536 0.17 -0.3
542,548 - B158DRAFT_0536 0.17 +1.6
542,548 - B158DRAFT_0536 0.17 -0.5
542,548 - B158DRAFT_0536 0.17 +0.6
542,555 + B158DRAFT_0536 0.18 -0.4
542,556 - B158DRAFT_0536 0.18 +1.0
542,563 - B158DRAFT_0536 0.19 -0.5
542,563 - B158DRAFT_0536 0.19 +0.3
542,575 - B158DRAFT_0536 0.20 -0.5
542,601 + B158DRAFT_0536 0.24 +1.8
542,615 - B158DRAFT_0536 0.25 -2.0
542,616 - B158DRAFT_0536 0.25 +0.8
542,728 + B158DRAFT_0536 0.39 -2.1
542,736 - B158DRAFT_0536 0.40 -0.3
542,743 + B158DRAFT_0536 0.40 -1.7
542,743 + B158DRAFT_0536 0.40 +1.2
542,786 + B158DRAFT_0536 0.46 -0.3
542,794 - B158DRAFT_0536 0.47 -1.9
542,823 + B158DRAFT_0536 0.50 -0.1
542,838 + B158DRAFT_0536 0.52 -0.1
542,838 + B158DRAFT_0536 0.52 -1.3
542,935 + B158DRAFT_0536 0.63 +0.2
542,935 + B158DRAFT_0536 0.63 -0.2
542,935 + B158DRAFT_0536 0.63 -0.8
542,935 + B158DRAFT_0536 0.63 +1.2
542,935 + B158DRAFT_0536 0.63 +0.3
542,943 - B158DRAFT_0536 0.64 +1.1
542,943 - B158DRAFT_0536 0.64 +1.0
542,943 - B158DRAFT_0536 0.64 +0.1
542,943 - B158DRAFT_0536 0.64 +1.1
542,945 + B158DRAFT_0536 0.65 -1.0
542,945 + B158DRAFT_0536 0.65 +1.0
542,945 + B158DRAFT_0536 0.65 -2.0
542,953 - B158DRAFT_0536 0.65 +0.3
542,953 - B158DRAFT_0536 0.65 +0.6
542,969 + B158DRAFT_0536 0.67 -1.2
543,089 - B158DRAFT_0536 0.82 +0.3
543,130 + B158DRAFT_0536 0.87 -1.4
543,211 + +0.9
543,211 + -0.3
543,237 + +1.1
543,237 + -0.3

Or see this region's nucleotide sequence