Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0325

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0323 and B158DRAFT_0324 are separated by 27 nucleotidesB158DRAFT_0324 and B158DRAFT_0325 are separated by 89 nucleotidesB158DRAFT_0325 and B158DRAFT_0326 are separated by 338 nucleotides B158DRAFT_0323: B158DRAFT_0323 - Protocatechuate 3,4-dioxygenase beta subunit, at 328,234 to 328,830 _0323 B158DRAFT_0324: B158DRAFT_0324 - Cytochrome B561, at 328,858 to 329,445 _0324 B158DRAFT_0325: B158DRAFT_0325 - transcriptional regulator, LytTR family, at 329,535 to 330,401 _0325 B158DRAFT_0326: B158DRAFT_0326 - Outer membrane protein V, at 330,740 to 331,567 _0326 Position (kb) 329 330 331Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 328.540 kb on + strand, within B158DRAFT_0323at 328.548 kb on - strand, within B158DRAFT_0323at 328.557 kb on - strand, within B158DRAFT_0323at 328.599 kb on - strand, within B158DRAFT_0323at 328.662 kb on + strand, within B158DRAFT_0323at 328.738 kb on + strand, within B158DRAFT_0323at 328.746 kb on - strand, within B158DRAFT_0323at 328.746 kb on - strand, within B158DRAFT_0323at 328.746 kb on - strand, within B158DRAFT_0323at 328.746 kb on - strand, within B158DRAFT_0323at 328.820 kb on + strandat 328.963 kb on + strand, within B158DRAFT_0324at 328.973 kb on - strand, within B158DRAFT_0324at 329.007 kb on + strand, within B158DRAFT_0324at 329.007 kb on + strand, within B158DRAFT_0324at 329.029 kb on - strand, within B158DRAFT_0324at 329.116 kb on + strand, within B158DRAFT_0324at 329.125 kb on + strand, within B158DRAFT_0324at 329.164 kb on + strand, within B158DRAFT_0324at 329.197 kb on + strand, within B158DRAFT_0324at 329.205 kb on - strand, within B158DRAFT_0324at 329.274 kb on - strand, within B158DRAFT_0324at 329.287 kb on - strand, within B158DRAFT_0324at 329.297 kb on - strand, within B158DRAFT_0324at 329.297 kb on - strand, within B158DRAFT_0324at 329.376 kb on + strand, within B158DRAFT_0324at 329.442 kb on - strandat 329.533 kb on + strandat 329.533 kb on - strandat 329.539 kb on + strandat 329.541 kb on - strandat 329.541 kb on - strandat 329.547 kb on - strandat 329.626 kb on - strand, within B158DRAFT_0325at 329.631 kb on + strand, within B158DRAFT_0325at 329.704 kb on + strand, within B158DRAFT_0325at 330.083 kb on - strand, within B158DRAFT_0325at 330.138 kb on - strand, within B158DRAFT_0325at 330.228 kb on - strand, within B158DRAFT_0325at 330.228 kb on - strand, within B158DRAFT_0325at 330.256 kb on + strand, within B158DRAFT_0325at 330.279 kb on - strand, within B158DRAFT_0325at 330.341 kb on - strandat 330.435 kb on - strandat 330.505 kb on + strandat 330.808 kb on - strandat 331.058 kb on + strand, within B158DRAFT_0326at 331.058 kb on + strand, within B158DRAFT_0326at 331.066 kb on - strand, within B158DRAFT_0326at 331.066 kb on - strand, within B158DRAFT_0326at 331.066 kb on - strand, within B158DRAFT_0326at 331.347 kb on + strand, within B158DRAFT_0326at 331.347 kb on + strand, within B158DRAFT_0326at 331.347 kb on + strand, within B158DRAFT_0326at 331.347 kb on + strand, within B158DRAFT_0326at 331.347 kb on + strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.355 kb on - strand, within B158DRAFT_0326at 331.360 kb on - strand, within B158DRAFT_0326

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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328,540 + B158DRAFT_0323 0.51 -1.2
328,548 - B158DRAFT_0323 0.53 -1.3
328,557 - B158DRAFT_0323 0.54 +0.1
328,599 - B158DRAFT_0323 0.61 -1.0
328,662 + B158DRAFT_0323 0.72 -0.8
328,738 + B158DRAFT_0323 0.84 +0.8
328,746 - B158DRAFT_0323 0.86 +0.1
328,746 - B158DRAFT_0323 0.86 +1.2
328,746 - B158DRAFT_0323 0.86 -0.6
328,746 - B158DRAFT_0323 0.86 -1.4
328,820 + -1.1
328,963 + B158DRAFT_0324 0.18 +0.3
328,973 - B158DRAFT_0324 0.20 -1.6
329,007 + B158DRAFT_0324 0.25 -0.6
329,007 + B158DRAFT_0324 0.25 -0.9
329,029 - B158DRAFT_0324 0.29 -0.2
329,116 + B158DRAFT_0324 0.44 +0.2
329,125 + B158DRAFT_0324 0.45 +1.1
329,164 + B158DRAFT_0324 0.52 -0.4
329,197 + B158DRAFT_0324 0.58 +0.4
329,205 - B158DRAFT_0324 0.59 -1.4
329,274 - B158DRAFT_0324 0.71 +0.2
329,287 - B158DRAFT_0324 0.73 +0.6
329,297 - B158DRAFT_0324 0.75 -0.3
329,297 - B158DRAFT_0324 0.75 +1.0
329,376 + B158DRAFT_0324 0.88 -1.1
329,442 - -2.8
329,533 + -1.1
329,533 - -0.9
329,539 + -1.2
329,541 - -1.8
329,541 - -0.9
329,547 - -0.0
329,626 - B158DRAFT_0325 0.10 -1.4
329,631 + B158DRAFT_0325 0.11 -0.0
329,704 + B158DRAFT_0325 0.19 +0.5
330,083 - B158DRAFT_0325 0.63 -0.2
330,138 - B158DRAFT_0325 0.70 -1.6
330,228 - B158DRAFT_0325 0.80 +0.4
330,228 - B158DRAFT_0325 0.80 -0.2
330,256 + B158DRAFT_0325 0.83 -0.9
330,279 - B158DRAFT_0325 0.86 -0.0
330,341 - -1.1
330,435 - -1.4
330,505 + -0.8
330,808 - +0.5
331,058 + B158DRAFT_0326 0.38 -0.2
331,058 + B158DRAFT_0326 0.38 -0.2
331,066 - B158DRAFT_0326 0.39 +1.8
331,066 - B158DRAFT_0326 0.39 -1.5
331,066 - B158DRAFT_0326 0.39 -0.7
331,347 + B158DRAFT_0326 0.73 +0.6
331,347 + B158DRAFT_0326 0.73 -2.6
331,347 + B158DRAFT_0326 0.73 +0.9
331,347 + B158DRAFT_0326 0.73 -1.7
331,347 + B158DRAFT_0326 0.73 -1.9
331,355 - B158DRAFT_0326 0.74 -0.1
331,355 - B158DRAFT_0326 0.74 -1.1
331,355 - B158DRAFT_0326 0.74 -0.2
331,355 - B158DRAFT_0326 0.74 +2.0
331,355 - B158DRAFT_0326 0.74 -1.4
331,355 - B158DRAFT_0326 0.74 +2.0
331,355 - B158DRAFT_0326 0.74 -2.4
331,355 - B158DRAFT_0326 0.74 +3.1
331,355 - B158DRAFT_0326 0.74 +0.5
331,355 - B158DRAFT_0326 0.74 +0.4
331,355 - B158DRAFT_0326 0.74 -1.3
331,355 - B158DRAFT_0326 0.74 -0.8
331,360 - B158DRAFT_0326 0.75 +0.2

Or see this region's nucleotide sequence