Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0291

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0290 and B158DRAFT_0291 overlap by 4 nucleotidesB158DRAFT_0291 and B158DRAFT_0293 are separated by 618 nucleotidesB158DRAFT_0293 and B158DRAFT_0294 overlap by 17 nucleotides B158DRAFT_0290: B158DRAFT_0290 - thiamine-phosphate diphosphorylase, at 293,422 to 294,903 _0290 B158DRAFT_0291: B158DRAFT_0291 - thiazole-phosphate synthase, at 294,900 to 295,673 _0291 B158DRAFT_0293: B158DRAFT_0293 - thiamine biosynthesis protein ThiS, at 296,292 to 296,489 _0293 B158DRAFT_0294: B158DRAFT_0294 - glycine oxidase (EC 1.4.3.19), at 296,473 to 297,528 _0294 Position (kb) 294 295 296Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 293.901 kb on - strand, within B158DRAFT_0290at 293.938 kb on - strand, within B158DRAFT_0290at 293.958 kb on - strand, within B158DRAFT_0290at 293.960 kb on + strandat 293.968 kb on + strand, within B158DRAFT_0290at 294.070 kb on + strand, within B158DRAFT_0290at 294.077 kb on - strand, within B158DRAFT_0290at 294.084 kb on + strand, within B158DRAFT_0290at 294.084 kb on + strand, within B158DRAFT_0290at 294.084 kb on + strand, within B158DRAFT_0290at 294.084 kb on + strand, within B158DRAFT_0290at 294.089 kb on + strand, within B158DRAFT_0290at 294.092 kb on - strand, within B158DRAFT_0290at 294.092 kb on - strand, within B158DRAFT_0290at 294.092 kb on - strand, within B158DRAFT_0290at 294.110 kb on + strand, within B158DRAFT_0290at 294.142 kb on - strand, within B158DRAFT_0290at 294.171 kb on - strand, within B158DRAFT_0290at 294.223 kb on - strand, within B158DRAFT_0290at 294.245 kb on + strand, within B158DRAFT_0290at 294.361 kb on + strand, within B158DRAFT_0290at 294.368 kb on + strand, within B158DRAFT_0290at 294.368 kb on + strand, within B158DRAFT_0290at 294.376 kb on - strand, within B158DRAFT_0290at 294.407 kb on + strand, within B158DRAFT_0290at 294.407 kb on + strand, within B158DRAFT_0290at 294.407 kb on + strand, within B158DRAFT_0290at 294.412 kb on + strand, within B158DRAFT_0290at 294.415 kb on - strand, within B158DRAFT_0290at 294.415 kb on - strand, within B158DRAFT_0290at 294.453 kb on + strand, within B158DRAFT_0290at 294.639 kb on + strand, within B158DRAFT_0290at 294.644 kb on + strand, within B158DRAFT_0290at 294.647 kb on - strand, within B158DRAFT_0290at 294.649 kb on + strand, within B158DRAFT_0290at 294.657 kb on + strand, within B158DRAFT_0290at 294.657 kb on + strand, within B158DRAFT_0290at 294.657 kb on - strand, within B158DRAFT_0290at 294.657 kb on - strand, within B158DRAFT_0290at 294.687 kb on + strand, within B158DRAFT_0290at 294.734 kb on + strand, within B158DRAFT_0290at 294.818 kb on + strandat 294.826 kb on - strandat 294.851 kb on + strandat 294.851 kb on + strandat 294.859 kb on - strandat 294.859 kb on - strandat 294.859 kb on - strandat 294.861 kb on + strandat 294.935 kb on - strandat 294.935 kb on - strandat 294.940 kb on + strandat 294.948 kb on - strandat 294.973 kb on + strandat 294.988 kb on + strand, within B158DRAFT_0291at 294.988 kb on + strand, within B158DRAFT_0291at 294.996 kb on - strand, within B158DRAFT_0291at 294.996 kb on - strand, within B158DRAFT_0291at 294.996 kb on - strand, within B158DRAFT_0291at 295.039 kb on + strand, within B158DRAFT_0291at 295.050 kb on - strand, within B158DRAFT_0291at 295.068 kb on + strand, within B158DRAFT_0291at 295.068 kb on + strand, within B158DRAFT_0291at 295.098 kb on + strand, within B158DRAFT_0291at 295.101 kb on - strand, within B158DRAFT_0291at 295.122 kb on + strand, within B158DRAFT_0291at 295.122 kb on + strand, within B158DRAFT_0291at 295.122 kb on + strand, within B158DRAFT_0291at 295.122 kb on + strand, within B158DRAFT_0291at 295.122 kb on + strand, within B158DRAFT_0291at 295.122 kb on + strand, within B158DRAFT_0291at 295.130 kb on - strand, within B158DRAFT_0291at 295.130 kb on - strand, within B158DRAFT_0291at 295.130 kb on - strand, within B158DRAFT_0291at 295.130 kb on - strand, within B158DRAFT_0291at 295.130 kb on - strand, within B158DRAFT_0291at 295.130 kb on - strand, within B158DRAFT_0291at 295.130 kb on - strand, within B158DRAFT_0291at 295.130 kb on - strand, within B158DRAFT_0291at 295.200 kb on + strand, within B158DRAFT_0291at 295.312 kb on - strand, within B158DRAFT_0291at 295.394 kb on + strand, within B158DRAFT_0291at 295.402 kb on - strand, within B158DRAFT_0291at 295.474 kb on + strand, within B158DRAFT_0291at 295.530 kb on + strand, within B158DRAFT_0291at 295.538 kb on - strand, within B158DRAFT_0291at 295.538 kb on - strand, within B158DRAFT_0291at 295.539 kb on - strand, within B158DRAFT_0291at 295.564 kb on + strand, within B158DRAFT_0291at 295.939 kb on - strandat 295.939 kb on - strandat 295.954 kb on + strandat 295.968 kb on + strandat 295.968 kb on + strandat 295.976 kb on - strandat 295.984 kb on - strandat 296.440 kb on - strand, within B158DRAFT_0293at 296.440 kb on - strand, within B158DRAFT_0293at 296.440 kb on - strand, within B158DRAFT_0293at 296.629 kb on + strand, within B158DRAFT_0294

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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293,901 - B158DRAFT_0290 0.32 +2.8
293,938 - B158DRAFT_0290 0.35 +4.8
293,958 - B158DRAFT_0290 0.36 -0.9
293,960 + +2.5
293,968 + B158DRAFT_0290 0.37 -0.4
294,070 + B158DRAFT_0290 0.44 +0.4
294,077 - B158DRAFT_0290 0.44 -2.9
294,084 + B158DRAFT_0290 0.45 +0.2
294,084 + B158DRAFT_0290 0.45 +0.1
294,084 + B158DRAFT_0290 0.45 +1.3
294,084 + B158DRAFT_0290 0.45 +1.3
294,089 + B158DRAFT_0290 0.45 +2.2
294,092 - B158DRAFT_0290 0.45 -0.0
294,092 - B158DRAFT_0290 0.45 +0.6
294,092 - B158DRAFT_0290 0.45 -0.5
294,110 + B158DRAFT_0290 0.46 +1.8
294,142 - B158DRAFT_0290 0.49 +0.3
294,171 - B158DRAFT_0290 0.51 +0.6
294,223 - B158DRAFT_0290 0.54 +0.9
294,245 + B158DRAFT_0290 0.56 -0.4
294,361 + B158DRAFT_0290 0.63 +0.7
294,368 + B158DRAFT_0290 0.64 +0.7
294,368 + B158DRAFT_0290 0.64 -0.1
294,376 - B158DRAFT_0290 0.64 +3.5
294,407 + B158DRAFT_0290 0.66 +1.5
294,407 + B158DRAFT_0290 0.66 +1.3
294,407 + B158DRAFT_0290 0.66 +0.7
294,412 + B158DRAFT_0290 0.67 +1.0
294,415 - B158DRAFT_0290 0.67 +1.2
294,415 - B158DRAFT_0290 0.67 +0.8
294,453 + B158DRAFT_0290 0.70 +2.3
294,639 + B158DRAFT_0290 0.82 -1.0
294,644 + B158DRAFT_0290 0.82 -0.7
294,647 - B158DRAFT_0290 0.83 +0.9
294,649 + B158DRAFT_0290 0.83 +2.8
294,657 + B158DRAFT_0290 0.83 -0.8
294,657 + B158DRAFT_0290 0.83 -0.9
294,657 - B158DRAFT_0290 0.83 -0.4
294,657 - B158DRAFT_0290 0.83 +1.2
294,687 + B158DRAFT_0290 0.85 -0.6
294,734 + B158DRAFT_0290 0.89 +0.9
294,818 + +0.1
294,826 - -0.1
294,851 + +2.0
294,851 + +1.3
294,859 - +0.2
294,859 - +0.8
294,859 - +1.2
294,861 + +1.0
294,935 - -2.3
294,935 - -0.4
294,940 + +0.7
294,948 - +1.4
294,973 + +0.8
294,988 + B158DRAFT_0291 0.11 +2.8
294,988 + B158DRAFT_0291 0.11 -1.0
294,996 - B158DRAFT_0291 0.12 +2.3
294,996 - B158DRAFT_0291 0.12 -0.4
294,996 - B158DRAFT_0291 0.12 +1.1
295,039 + B158DRAFT_0291 0.18 +2.3
295,050 - B158DRAFT_0291 0.19 +2.7
295,068 + B158DRAFT_0291 0.22 -0.7
295,068 + B158DRAFT_0291 0.22 -0.6
295,098 + B158DRAFT_0291 0.26 -1.2
295,101 - B158DRAFT_0291 0.26 +1.3
295,122 + B158DRAFT_0291 0.29 +1.9
295,122 + B158DRAFT_0291 0.29 +3.2
295,122 + B158DRAFT_0291 0.29 +2.0
295,122 + B158DRAFT_0291 0.29 +1.4
295,122 + B158DRAFT_0291 0.29 +1.3
295,122 + B158DRAFT_0291 0.29 +0.1
295,130 - B158DRAFT_0291 0.30 -0.1
295,130 - B158DRAFT_0291 0.30 +1.1
295,130 - B158DRAFT_0291 0.30 +1.4
295,130 - B158DRAFT_0291 0.30 +2.8
295,130 - B158DRAFT_0291 0.30 -0.5
295,130 - B158DRAFT_0291 0.30 +0.2
295,130 - B158DRAFT_0291 0.30 +1.1
295,130 - B158DRAFT_0291 0.30 +1.7
295,200 + B158DRAFT_0291 0.39 +0.5
295,312 - B158DRAFT_0291 0.53 +2.0
295,394 + B158DRAFT_0291 0.64 -0.6
295,402 - B158DRAFT_0291 0.65 +1.4
295,474 + B158DRAFT_0291 0.74 +0.5
295,530 + B158DRAFT_0291 0.81 -0.5
295,538 - B158DRAFT_0291 0.82 +0.1
295,538 - B158DRAFT_0291 0.82 +1.7
295,539 - B158DRAFT_0291 0.83 +1.3
295,564 + B158DRAFT_0291 0.86 +1.5
295,939 - -2.5
295,939 - -0.4
295,954 + +0.8
295,968 + -0.0
295,968 + -0.3
295,976 - +2.6
295,984 - -0.2
296,440 - B158DRAFT_0293 0.75 +0.1
296,440 - B158DRAFT_0293 0.75 -0.4
296,440 - B158DRAFT_0293 0.75 +0.9
296,629 + B158DRAFT_0294 0.15 -1.2

Or see this region's nucleotide sequence