Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0254

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0252 and B158DRAFT_0253 are separated by 16 nucleotidesB158DRAFT_0253 and B158DRAFT_0254 are separated by 102 nucleotidesB158DRAFT_0254 and B158DRAFT_0255 overlap by 4 nucleotides B158DRAFT_0252: B158DRAFT_0252 - hydroxymethylbilane synthase (EC 2.5.1.61), at 258,093 to 259,028 _0252 B158DRAFT_0253: B158DRAFT_0253 - Uroporphyrinogen-III synthase, at 259,045 to 259,797 _0253 B158DRAFT_0254: B158DRAFT_0254 - Uncharacterized enzyme of heme biosynthesis, at 259,900 to 261,183 _0254 B158DRAFT_0255: B158DRAFT_0255 - Uncharacterized enzyme of heme biosynthesis, at 261,180 to 262,406 _0255 Position (kb) 259 260 261 262Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 259.022 kb on + strandat 259.911 kb on + strandat 259.919 kb on - strandat 259.919 kb on - strandat 260.010 kb on + strandat 260.015 kb on + strandat 260.051 kb on + strand, within B158DRAFT_0254at 260.051 kb on + strand, within B158DRAFT_0254at 260.051 kb on + strand, within B158DRAFT_0254at 260.059 kb on - strand, within B158DRAFT_0254at 260.059 kb on - strand, within B158DRAFT_0254at 260.059 kb on - strand, within B158DRAFT_0254at 260.059 kb on - strand, within B158DRAFT_0254at 260.059 kb on - strand, within B158DRAFT_0254at 260.110 kb on + strand, within B158DRAFT_0254at 260.110 kb on + strand, within B158DRAFT_0254at 260.118 kb on - strand, within B158DRAFT_0254at 260.158 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.200 kb on + strand, within B158DRAFT_0254at 260.208 kb on - strand, within B158DRAFT_0254at 260.211 kb on + strand, within B158DRAFT_0254at 260.433 kb on - strand, within B158DRAFT_0254at 260.492 kb on + strand, within B158DRAFT_0254at 260.560 kb on + strand, within B158DRAFT_0254at 260.574 kb on + strand, within B158DRAFT_0254at 260.574 kb on + strand, within B158DRAFT_0254at 260.582 kb on - strand, within B158DRAFT_0254at 260.591 kb on + strand, within B158DRAFT_0254at 260.636 kb on + strand, within B158DRAFT_0254at 260.782 kb on - strand, within B158DRAFT_0254at 260.782 kb on - strand, within B158DRAFT_0254at 260.790 kb on + strand, within B158DRAFT_0254at 260.790 kb on + strand, within B158DRAFT_0254at 260.790 kb on + strand, within B158DRAFT_0254at 260.790 kb on + strand, within B158DRAFT_0254at 260.790 kb on + strand, within B158DRAFT_0254at 260.790 kb on + strand, within B158DRAFT_0254at 260.790 kb on + strand, within B158DRAFT_0254at 260.798 kb on - strand, within B158DRAFT_0254at 260.798 kb on - strand, within B158DRAFT_0254at 260.798 kb on - strand, within B158DRAFT_0254at 260.798 kb on - strand, within B158DRAFT_0254at 260.798 kb on - strand, within B158DRAFT_0254at 260.798 kb on - strand, within B158DRAFT_0254at 260.798 kb on - strand, within B158DRAFT_0254at 260.798 kb on - strand, within B158DRAFT_0254at 260.798 kb on - strand, within B158DRAFT_0254at 260.798 kb on - strand, within B158DRAFT_0254at 260.835 kb on - strand, within B158DRAFT_0254at 260.851 kb on + strand, within B158DRAFT_0254at 260.869 kb on + strand, within B158DRAFT_0254at 260.888 kb on + strand, within B158DRAFT_0254at 260.896 kb on - strand, within B158DRAFT_0254at 260.923 kb on + strand, within B158DRAFT_0254at 260.942 kb on + strand, within B158DRAFT_0254at 260.947 kb on + strand, within B158DRAFT_0254at 260.965 kb on - strand, within B158DRAFT_0254at 261.033 kb on - strand, within B158DRAFT_0254at 261.038 kb on - strand, within B158DRAFT_0254at 261.038 kb on - strand, within B158DRAFT_0254at 261.112 kb on + strandat 261.118 kb on - strandat 261.161 kb on + strandat 261.161 kb on + strandat 261.161 kb on + strandat 261.161 kb on + strandat 261.161 kb on + strandat 261.161 kb on + strandat 261.161 kb on + strandat 261.161 kb on + strandat 261.164 kb on + strandat 261.169 kb on - strandat 261.169 kb on - strandat 261.169 kb on - strandat 261.169 kb on - strandat 261.169 kb on - strandat 261.169 kb on - strandat 261.169 kb on - strandat 261.169 kb on - strandat 261.341 kb on + strand, within B158DRAFT_0255at 261.349 kb on - strand, within B158DRAFT_0255at 261.349 kb on - strand, within B158DRAFT_0255at 261.358 kb on - strand, within B158DRAFT_0255at 261.422 kb on + strand, within B158DRAFT_0255at 261.422 kb on + strand, within B158DRAFT_0255at 261.430 kb on - strand, within B158DRAFT_0255at 261.464 kb on + strand, within B158DRAFT_0255at 261.464 kb on + strand, within B158DRAFT_0255at 261.464 kb on + strand, within B158DRAFT_0255at 261.464 kb on + strand, within B158DRAFT_0255at 261.464 kb on + strand, within B158DRAFT_0255at 261.472 kb on - strand, within B158DRAFT_0255at 261.472 kb on - strand, within B158DRAFT_0255at 261.472 kb on - strand, within B158DRAFT_0255at 261.500 kb on + strand, within B158DRAFT_0255at 261.500 kb on + strand, within B158DRAFT_0255at 261.500 kb on + strand, within B158DRAFT_0255at 261.500 kb on + strand, within B158DRAFT_0255at 261.508 kb on - strand, within B158DRAFT_0255at 261.508 kb on - strand, within B158DRAFT_0255at 261.508 kb on - strand, within B158DRAFT_0255at 261.508 kb on - strand, within B158DRAFT_0255at 261.523 kb on + strand, within B158DRAFT_0255at 261.533 kb on + strand, within B158DRAFT_0255at 261.562 kb on + strand, within B158DRAFT_0255at 261.570 kb on - strand, within B158DRAFT_0255at 261.575 kb on - strand, within B158DRAFT_0255at 261.579 kb on + strand, within B158DRAFT_0255at 261.640 kb on + strand, within B158DRAFT_0255at 261.645 kb on + strand, within B158DRAFT_0255at 261.658 kb on - strand, within B158DRAFT_0255at 261.714 kb on - strand, within B158DRAFT_0255at 261.784 kb on + strand, within B158DRAFT_0255at 261.854 kb on - strand, within B158DRAFT_0255at 261.915 kb on + strand, within B158DRAFT_0255at 261.928 kb on - strand, within B158DRAFT_0255at 261.928 kb on - strand, within B158DRAFT_0255at 261.928 kb on - strand, within B158DRAFT_0255at 261.954 kb on - strand, within B158DRAFT_0255at 261.954 kb on - strand, within B158DRAFT_0255at 261.954 kb on - strand, within B158DRAFT_0255at 261.970 kb on + strand, within B158DRAFT_0255at 261.970 kb on + strand, within B158DRAFT_0255at 261.973 kb on - strand, within B158DRAFT_0255at 261.978 kb on - strand, within B158DRAFT_0255at 261.978 kb on - strand, within B158DRAFT_0255at 261.978 kb on - strand, within B158DRAFT_0255at 261.978 kb on - strand, within B158DRAFT_0255at 261.978 kb on - strand, within B158DRAFT_0255at 262.006 kb on - strand, within B158DRAFT_0255at 262.034 kb on + strand, within B158DRAFT_0255at 262.042 kb on - strand, within B158DRAFT_0255at 262.157 kb on - strand, within B158DRAFT_0255at 262.167 kb on - strand, within B158DRAFT_0255at 262.169 kb on + strand, within B158DRAFT_0255at 262.177 kb on - strand, within B158DRAFT_0255at 262.177 kb on - strand, within B158DRAFT_0255at 262.177 kb on - strand, within B158DRAFT_0255

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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259,022 + +0.6
259,911 + +1.2
259,919 - -2.8
259,919 - +2.4
260,010 + +0.5
260,015 + +2.4
260,051 + B158DRAFT_0254 0.12 +0.2
260,051 + B158DRAFT_0254 0.12 +0.5
260,051 + B158DRAFT_0254 0.12 +2.6
260,059 - B158DRAFT_0254 0.12 +1.0
260,059 - B158DRAFT_0254 0.12 +4.2
260,059 - B158DRAFT_0254 0.12 -1.0
260,059 - B158DRAFT_0254 0.12 +2.8
260,059 - B158DRAFT_0254 0.12 -0.3
260,110 + B158DRAFT_0254 0.16 -1.5
260,110 + B158DRAFT_0254 0.16 +2.0
260,118 - B158DRAFT_0254 0.17 -0.6
260,158 + B158DRAFT_0254 0.20 +2.0
260,200 + B158DRAFT_0254 0.23 -1.6
260,200 + B158DRAFT_0254 0.23 +1.4
260,200 + B158DRAFT_0254 0.23 +1.1
260,200 + B158DRAFT_0254 0.23 +0.7
260,200 + B158DRAFT_0254 0.23 -0.4
260,200 + B158DRAFT_0254 0.23 +0.9
260,200 + B158DRAFT_0254 0.23 +2.9
260,200 + B158DRAFT_0254 0.23 +1.7
260,200 + B158DRAFT_0254 0.23 +0.3
260,200 + B158DRAFT_0254 0.23 +0.9
260,208 - B158DRAFT_0254 0.24 -1.7
260,211 + B158DRAFT_0254 0.24 +0.4
260,433 - B158DRAFT_0254 0.42 +1.2
260,492 + B158DRAFT_0254 0.46 +0.5
260,560 + B158DRAFT_0254 0.51 -0.9
260,574 + B158DRAFT_0254 0.52 -0.6
260,574 + B158DRAFT_0254 0.52 +1.9
260,582 - B158DRAFT_0254 0.53 +2.1
260,591 + B158DRAFT_0254 0.54 +1.1
260,636 + B158DRAFT_0254 0.57 +0.5
260,782 - B158DRAFT_0254 0.69 +2.4
260,782 - B158DRAFT_0254 0.69 +0.2
260,790 + B158DRAFT_0254 0.69 +0.6
260,790 + B158DRAFT_0254 0.69 +0.0
260,790 + B158DRAFT_0254 0.69 -0.1
260,790 + B158DRAFT_0254 0.69 +0.4
260,790 + B158DRAFT_0254 0.69 +2.1
260,790 + B158DRAFT_0254 0.69 +1.4
260,790 + B158DRAFT_0254 0.69 -2.4
260,798 - B158DRAFT_0254 0.70 +1.6
260,798 - B158DRAFT_0254 0.70 +0.8
260,798 - B158DRAFT_0254 0.70 -0.0
260,798 - B158DRAFT_0254 0.70 +0.3
260,798 - B158DRAFT_0254 0.70 -0.2
260,798 - B158DRAFT_0254 0.70 +1.8
260,798 - B158DRAFT_0254 0.70 -0.6
260,798 - B158DRAFT_0254 0.70 +0.8
260,798 - B158DRAFT_0254 0.70 +0.9
260,798 - B158DRAFT_0254 0.70 -0.0
260,835 - B158DRAFT_0254 0.73 +0.1
260,851 + B158DRAFT_0254 0.74 +0.9
260,869 + B158DRAFT_0254 0.75 -0.4
260,888 + B158DRAFT_0254 0.77 +0.6
260,896 - B158DRAFT_0254 0.78 -1.4
260,923 + B158DRAFT_0254 0.80 +0.8
260,942 + B158DRAFT_0254 0.81 +1.2
260,947 + B158DRAFT_0254 0.82 +1.6
260,965 - B158DRAFT_0254 0.83 -0.7
261,033 - B158DRAFT_0254 0.88 +1.7
261,038 - B158DRAFT_0254 0.89 +1.5
261,038 - B158DRAFT_0254 0.89 +0.8
261,112 + +2.6
261,118 - +1.8
261,161 + -1.7
261,161 + +1.4
261,161 + +1.6
261,161 + -0.4
261,161 + +2.2
261,161 + -2.0
261,161 + -0.6
261,161 + +0.2
261,164 + -0.2
261,169 - +3.1
261,169 - +0.2
261,169 - -0.6
261,169 - +0.4
261,169 - +1.6
261,169 - -1.1
261,169 - +2.0
261,169 - +1.4
261,341 + B158DRAFT_0255 0.13 +1.7
261,349 - B158DRAFT_0255 0.14 -0.0
261,349 - B158DRAFT_0255 0.14 +1.0
261,358 - B158DRAFT_0255 0.15 +0.0
261,422 + B158DRAFT_0255 0.20 +1.2
261,422 + B158DRAFT_0255 0.20 +0.1
261,430 - B158DRAFT_0255 0.20 -0.8
261,464 + B158DRAFT_0255 0.23 +0.6
261,464 + B158DRAFT_0255 0.23 -1.3
261,464 + B158DRAFT_0255 0.23 +1.9
261,464 + B158DRAFT_0255 0.23 +1.5
261,464 + B158DRAFT_0255 0.23 +1.3
261,472 - B158DRAFT_0255 0.24 +1.1
261,472 - B158DRAFT_0255 0.24 +2.1
261,472 - B158DRAFT_0255 0.24 +0.6
261,500 + B158DRAFT_0255 0.26 +2.0
261,500 + B158DRAFT_0255 0.26 -1.4
261,500 + B158DRAFT_0255 0.26 +3.0
261,500 + B158DRAFT_0255 0.26 +0.5
261,508 - B158DRAFT_0255 0.27 -0.2
261,508 - B158DRAFT_0255 0.27 -0.6
261,508 - B158DRAFT_0255 0.27 +3.0
261,508 - B158DRAFT_0255 0.27 -0.9
261,523 + B158DRAFT_0255 0.28 +0.2
261,533 + B158DRAFT_0255 0.29 +0.9
261,562 + B158DRAFT_0255 0.31 -1.7
261,570 - B158DRAFT_0255 0.32 -0.2
261,575 - B158DRAFT_0255 0.32 +1.5
261,579 + B158DRAFT_0255 0.33 +3.4
261,640 + B158DRAFT_0255 0.37 +0.0
261,645 + B158DRAFT_0255 0.38 +2.4
261,658 - B158DRAFT_0255 0.39 -0.3
261,714 - B158DRAFT_0255 0.44 +0.2
261,784 + B158DRAFT_0255 0.49 +0.7
261,854 - B158DRAFT_0255 0.55 -1.5
261,915 + B158DRAFT_0255 0.60 -0.5
261,928 - B158DRAFT_0255 0.61 -0.2
261,928 - B158DRAFT_0255 0.61 +0.2
261,928 - B158DRAFT_0255 0.61 -0.0
261,954 - B158DRAFT_0255 0.63 -0.2
261,954 - B158DRAFT_0255 0.63 -1.2
261,954 - B158DRAFT_0255 0.63 +0.5
261,970 + B158DRAFT_0255 0.64 -0.9
261,970 + B158DRAFT_0255 0.64 +0.5
261,973 - B158DRAFT_0255 0.65 +0.2
261,978 - B158DRAFT_0255 0.65 +1.9
261,978 - B158DRAFT_0255 0.65 -1.5
261,978 - B158DRAFT_0255 0.65 -1.4
261,978 - B158DRAFT_0255 0.65 -0.1
261,978 - B158DRAFT_0255 0.65 -0.6
262,006 - B158DRAFT_0255 0.67 +1.2
262,034 + B158DRAFT_0255 0.70 -0.8
262,042 - B158DRAFT_0255 0.70 +0.4
262,157 - B158DRAFT_0255 0.80 -1.0
262,167 - B158DRAFT_0255 0.80 -0.4
262,169 + B158DRAFT_0255 0.81 +1.3
262,177 - B158DRAFT_0255 0.81 +0.1
262,177 - B158DRAFT_0255 0.81 -2.8
262,177 - B158DRAFT_0255 0.81 +1.4

Or see this region's nucleotide sequence