Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0075 and B158DRAFT_0076 are separated by 6 nucleotides B158DRAFT_0076 and B158DRAFT_0077 are separated by 15 nucleotides B158DRAFT_0077 and B158DRAFT_0078 overlap by 4 nucleotides
B158DRAFT_0075: B158DRAFT_0075 - lipoate synthase, at 70,882 to 71,907
_0075
B158DRAFT_0076: B158DRAFT_0076 - lipoate-protein ligase B, at 71,914 to 72,588
_0076
B158DRAFT_0077: B158DRAFT_0077 - Uncharacterized conserved protein, at 72,604 to 72,873
_0077
B158DRAFT_0078: B158DRAFT_0078 - Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase, at 72,870 to 73,769
_0078
Position (kb) 71
72
73 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 72.921 kb on - strand at 72.933 kb on - strand at 73.065 kb on - strand, within B158DRAFT_0078 at 73.085 kb on + strand, within B158DRAFT_0078 at 73.107 kb on + strand, within B158DRAFT_0078 at 73.107 kb on + strand, within B158DRAFT_0078 at 73.107 kb on + strand, within B158DRAFT_0078 at 73.107 kb on + strand, within B158DRAFT_0078 at 73.206 kb on + strand, within B158DRAFT_0078 at 73.223 kb on + strand, within B158DRAFT_0078 at 73.234 kb on + strand, within B158DRAFT_0078 at 73.248 kb on - strand, within B158DRAFT_0078 at 73.269 kb on + strand, within B158DRAFT_0078 at 73.305 kb on - strand, within B158DRAFT_0078 at 73.319 kb on - strand, within B158DRAFT_0078 at 73.389 kb on + strand, within B158DRAFT_0078 at 73.399 kb on + strand, within B158DRAFT_0078 at 73.471 kb on + strand, within B158DRAFT_0078 at 73.486 kb on - strand, within B158DRAFT_0078 at 73.535 kb on - strand, within B158DRAFT_0078 at 73.535 kb on - strand, within B158DRAFT_0078 at 73.535 kb on - strand, within B158DRAFT_0078 at 73.566 kb on - strand, within B158DRAFT_0078 at 73.580 kb on - strand, within B158DRAFT_0078 at 73.580 kb on - strand, within B158DRAFT_0078
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 72,921 - -1.6 72,933 - -1.4 73,065 - B158DRAFT_0078 0.22 -2.7 73,085 + B158DRAFT_0078 0.24 -1.1 73,107 + B158DRAFT_0078 0.26 +2.5 73,107 + B158DRAFT_0078 0.26 -0.9 73,107 + B158DRAFT_0078 0.26 +0.2 73,107 + B158DRAFT_0078 0.26 -2.0 73,206 + B158DRAFT_0078 0.37 -0.5 73,223 + B158DRAFT_0078 0.39 -0.1 73,234 + B158DRAFT_0078 0.40 +0.6 73,248 - B158DRAFT_0078 0.42 -0.3 73,269 + B158DRAFT_0078 0.44 +3.5 73,305 - B158DRAFT_0078 0.48 -0.0 73,319 - B158DRAFT_0078 0.50 +2.5 73,389 + B158DRAFT_0078 0.58 -1.7 73,399 + B158DRAFT_0078 0.59 +0.9 73,471 + B158DRAFT_0078 0.67 -1.4 73,486 - B158DRAFT_0078 0.68 -0.6 73,535 - B158DRAFT_0078 0.74 +1.6 73,535 - B158DRAFT_0078 0.74 +0.0 73,535 - B158DRAFT_0078 0.74 +0.4 73,566 - B158DRAFT_0078 0.77 -0.1 73,580 - B158DRAFT_0078 0.79 -0.7 73,580 - B158DRAFT_0078 0.79 -1.1
Or see this region's nucleotide sequence