Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0075

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0073 and B158DRAFT_0074 are separated by 133 nucleotidesB158DRAFT_0074 and B158DRAFT_0075 are separated by 210 nucleotidesB158DRAFT_0075 and B158DRAFT_0076 are separated by 6 nucleotidesB158DRAFT_0076 and B158DRAFT_0077 are separated by 15 nucleotidesB158DRAFT_0077 and B158DRAFT_0078 overlap by 4 nucleotides B158DRAFT_0073: B158DRAFT_0073 - Glutathione S-transferase, at 69,393 to 70,055 _0073 B158DRAFT_0074: B158DRAFT_0074 - FKBP-type peptidyl-prolyl cis-trans isomerases 2, at 70,189 to 70,671 _0074 B158DRAFT_0075: B158DRAFT_0075 - lipoate synthase, at 70,882 to 71,907 _0075 B158DRAFT_0076: B158DRAFT_0076 - lipoate-protein ligase B, at 71,914 to 72,588 _0076 B158DRAFT_0077: B158DRAFT_0077 - Uncharacterized conserved protein, at 72,604 to 72,873 _0077 B158DRAFT_0078: B158DRAFT_0078 - Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase, at 72,870 to 73,769 _0078 Position (kb) 70 71 72Strain fitness (log2 ratio) -2 -1 0 1 2 3at 70.024 kb on - strandat 70.024 kb on - strandat 70.048 kb on - strandat 70.115 kb on + strandat 70.195 kb on + strandat 70.195 kb on + strandat 70.339 kb on - strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.356 kb on + strand, within B158DRAFT_0074at 70.364 kb on - strand, within B158DRAFT_0074at 70.364 kb on - strand, within B158DRAFT_0074at 70.364 kb on - strand, within B158DRAFT_0074at 70.364 kb on - strand, within B158DRAFT_0074at 70.364 kb on - strand, within B158DRAFT_0074at 70.364 kb on - strand, within B158DRAFT_0074at 70.371 kb on - strand, within B158DRAFT_0074at 70.371 kb on - strand, within B158DRAFT_0074at 70.379 kb on + strand, within B158DRAFT_0074at 70.387 kb on - strand, within B158DRAFT_0074at 70.649 kb on + strandat 70.649 kb on + strandat 70.657 kb on - strandat 70.667 kb on - strandat 70.858 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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70,024 - -2.2
70,024 - -0.9
70,048 - +0.6
70,115 + -1.8
70,195 + -1.3
70,195 + +0.3
70,339 - B158DRAFT_0074 0.31 -1.0
70,356 + B158DRAFT_0074 0.35 -0.1
70,356 + B158DRAFT_0074 0.35 -0.2
70,356 + B158DRAFT_0074 0.35 +0.7
70,356 + B158DRAFT_0074 0.35 +0.2
70,356 + B158DRAFT_0074 0.35 -0.2
70,356 + B158DRAFT_0074 0.35 -0.1
70,364 - B158DRAFT_0074 0.36 -0.7
70,364 - B158DRAFT_0074 0.36 -0.9
70,364 - B158DRAFT_0074 0.36 -0.9
70,364 - B158DRAFT_0074 0.36 -0.6
70,364 - B158DRAFT_0074 0.36 -0.6
70,364 - B158DRAFT_0074 0.36 +0.7
70,371 - B158DRAFT_0074 0.38 -0.1
70,371 - B158DRAFT_0074 0.38 -0.9
70,379 + B158DRAFT_0074 0.39 +0.6
70,387 - B158DRAFT_0074 0.41 -2.4
70,649 + -0.5
70,649 + +3.2
70,657 - +1.8
70,667 - -2.2
70,858 + -2.2

Or see this region's nucleotide sequence