Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2459

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2458 and B158DRAFT_2459 overlap by 4 nucleotidesB158DRAFT_2459 and B158DRAFT_2460 overlap by 8 nucleotides B158DRAFT_2458: B158DRAFT_2458 - Homoserine acetyltransferase, at 633,173 to 634,192 _2458 B158DRAFT_2459: B158DRAFT_2459 - cystathionine gamma-synthase (EC 2.5.1.48), at 634,189 to 635,367 _2459 B158DRAFT_2460: B158DRAFT_2460 - aspartate kinase (EC 2.7.2.4), at 635,360 to 637,843 _2460 Position (kb) 634 635 636Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 633.200 kb on + strandat 633.200 kb on + strandat 633.215 kb on - strandat 633.216 kb on - strandat 633.227 kb on + strandat 633.235 kb on - strandat 633.235 kb on - strandat 633.240 kb on + strandat 633.240 kb on + strandat 633.240 kb on + strandat 633.250 kb on + strandat 633.266 kb on - strandat 633.285 kb on - strand, within B158DRAFT_2458at 633.317 kb on - strand, within B158DRAFT_2458at 633.317 kb on - strand, within B158DRAFT_2458at 633.317 kb on - strand, within B158DRAFT_2458at 633.351 kb on + strand, within B158DRAFT_2458at 633.358 kb on + strand, within B158DRAFT_2458at 633.481 kb on + strand, within B158DRAFT_2458at 633.538 kb on + strand, within B158DRAFT_2458at 633.538 kb on + strand, within B158DRAFT_2458at 633.538 kb on + strand, within B158DRAFT_2458at 633.541 kb on - strand, within B158DRAFT_2458at 633.546 kb on - strand, within B158DRAFT_2458at 633.546 kb on - strand, within B158DRAFT_2458at 633.546 kb on - strand, within B158DRAFT_2458at 633.672 kb on + strand, within B158DRAFT_2458at 633.688 kb on + strand, within B158DRAFT_2458at 633.700 kb on + strand, within B158DRAFT_2458at 633.797 kb on + strand, within B158DRAFT_2458at 633.951 kb on + strand, within B158DRAFT_2458at 633.959 kb on - strand, within B158DRAFT_2458at 634.142 kb on + strandat 634.151 kb on - strandat 634.169 kb on - strandat 634.264 kb on + strandat 634.321 kb on + strand, within B158DRAFT_2459at 634.368 kb on - strand, within B158DRAFT_2459at 634.382 kb on + strand, within B158DRAFT_2459at 634.436 kb on - strand, within B158DRAFT_2459at 634.482 kb on - strand, within B158DRAFT_2459at 634.509 kb on + strand, within B158DRAFT_2459at 634.557 kb on + strand, within B158DRAFT_2459at 634.560 kb on - strand, within B158DRAFT_2459at 634.565 kb on - strand, within B158DRAFT_2459at 634.631 kb on - strand, within B158DRAFT_2459at 634.806 kb on - strand, within B158DRAFT_2459at 634.865 kb on + strand, within B158DRAFT_2459at 634.865 kb on + strand, within B158DRAFT_2459at 634.865 kb on + strand, within B158DRAFT_2459at 634.865 kb on + strand, within B158DRAFT_2459at 634.865 kb on + strand, within B158DRAFT_2459at 634.873 kb on - strand, within B158DRAFT_2459at 634.873 kb on - strand, within B158DRAFT_2459at 634.873 kb on - strand, within B158DRAFT_2459at 634.873 kb on - strand, within B158DRAFT_2459at 634.907 kb on + strand, within B158DRAFT_2459at 634.914 kb on - strand, within B158DRAFT_2459at 634.930 kb on - strand, within B158DRAFT_2459at 635.140 kb on - strand, within B158DRAFT_2459at 635.142 kb on + strand, within B158DRAFT_2459at 635.150 kb on - strand, within B158DRAFT_2459at 635.168 kb on - strand, within B158DRAFT_2459at 635.184 kb on + strand, within B158DRAFT_2459at 635.226 kb on + strand, within B158DRAFT_2459at 635.276 kb on + strandat 635.343 kb on + strandat 635.343 kb on + strandat 635.343 kb on + strandat 635.343 kb on + strandat 635.343 kb on + strandat 635.351 kb on - strandat 635.351 kb on - strandat 635.377 kb on + strandat 635.385 kb on - strandat 635.392 kb on + strandat 635.585 kb on + strandat 635.585 kb on + strandat 635.588 kb on - strandat 635.593 kb on - strandat 635.633 kb on - strand, within B158DRAFT_2460at 635.742 kb on + strand, within B158DRAFT_2460at 635.761 kb on + strand, within B158DRAFT_2460at 635.808 kb on + strand, within B158DRAFT_2460at 635.816 kb on - strand, within B158DRAFT_2460at 635.846 kb on - strand, within B158DRAFT_2460at 635.917 kb on - strand, within B158DRAFT_2460at 636.143 kb on - strand, within B158DRAFT_2460at 636.161 kb on + strand, within B158DRAFT_2460

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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633,200 + -0.7
633,200 + -0.3
633,215 - -0.3
633,216 - -0.5
633,227 + +0.2
633,235 - -2.2
633,235 - -1.4
633,240 + -1.0
633,240 + -1.4
633,240 + -2.3
633,250 + -0.5
633,266 - -1.0
633,285 - B158DRAFT_2458 0.11 -0.8
633,317 - B158DRAFT_2458 0.14 -0.9
633,317 - B158DRAFT_2458 0.14 -0.7
633,317 - B158DRAFT_2458 0.14 -0.7
633,351 + B158DRAFT_2458 0.17 -0.9
633,358 + B158DRAFT_2458 0.18 +1.3
633,481 + B158DRAFT_2458 0.30 +0.1
633,538 + B158DRAFT_2458 0.36 -0.1
633,538 + B158DRAFT_2458 0.36 -0.6
633,538 + B158DRAFT_2458 0.36 +1.7
633,541 - B158DRAFT_2458 0.36 -1.9
633,546 - B158DRAFT_2458 0.37 -2.7
633,546 - B158DRAFT_2458 0.37 +0.6
633,546 - B158DRAFT_2458 0.37 +0.2
633,672 + B158DRAFT_2458 0.49 -1.4
633,688 + B158DRAFT_2458 0.50 +0.1
633,700 + B158DRAFT_2458 0.52 +0.3
633,797 + B158DRAFT_2458 0.61 -0.6
633,951 + B158DRAFT_2458 0.76 +0.3
633,959 - B158DRAFT_2458 0.77 +0.5
634,142 + -0.2
634,151 - +1.8
634,169 - -0.5
634,264 + +0.6
634,321 + B158DRAFT_2459 0.11 -0.6
634,368 - B158DRAFT_2459 0.15 +0.8
634,382 + B158DRAFT_2459 0.16 -0.7
634,436 - B158DRAFT_2459 0.21 -0.7
634,482 - B158DRAFT_2459 0.25 -0.7
634,509 + B158DRAFT_2459 0.27 +0.2
634,557 + B158DRAFT_2459 0.31 -1.2
634,560 - B158DRAFT_2459 0.31 +0.4
634,565 - B158DRAFT_2459 0.32 -1.2
634,631 - B158DRAFT_2459 0.37 -0.7
634,806 - B158DRAFT_2459 0.52 -0.4
634,865 + B158DRAFT_2459 0.57 +1.0
634,865 + B158DRAFT_2459 0.57 -3.0
634,865 + B158DRAFT_2459 0.57 -0.3
634,865 + B158DRAFT_2459 0.57 -2.6
634,865 + B158DRAFT_2459 0.57 -2.7
634,873 - B158DRAFT_2459 0.58 +0.9
634,873 - B158DRAFT_2459 0.58 -1.8
634,873 - B158DRAFT_2459 0.58 -1.7
634,873 - B158DRAFT_2459 0.58 +0.2
634,907 + B158DRAFT_2459 0.61 -0.4
634,914 - B158DRAFT_2459 0.61 -0.7
634,930 - B158DRAFT_2459 0.63 +0.7
635,140 - B158DRAFT_2459 0.81 +0.4
635,142 + B158DRAFT_2459 0.81 -0.3
635,150 - B158DRAFT_2459 0.82 -0.4
635,168 - B158DRAFT_2459 0.83 -0.9
635,184 + B158DRAFT_2459 0.84 +0.4
635,226 + B158DRAFT_2459 0.88 -0.1
635,276 + -1.1
635,343 + -0.8
635,343 + +0.5
635,343 + +0.1
635,343 + +0.1
635,343 + +1.0
635,351 - -0.0
635,351 - -0.7
635,377 + +0.4
635,385 - -0.6
635,392 + -0.3
635,585 + +0.5
635,585 + -0.4
635,588 - -1.0
635,593 - -0.4
635,633 - B158DRAFT_2460 0.11 -0.4
635,742 + B158DRAFT_2460 0.15 -0.1
635,761 + B158DRAFT_2460 0.16 +2.6
635,808 + B158DRAFT_2460 0.18 +1.3
635,816 - B158DRAFT_2460 0.18 -1.0
635,846 - B158DRAFT_2460 0.20 -1.2
635,917 - B158DRAFT_2460 0.22 -0.7
636,143 - B158DRAFT_2460 0.32 +0.6
636,161 + B158DRAFT_2460 0.32 -0.1

Or see this region's nucleotide sequence