Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2307

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2306 and B158DRAFT_2307 are separated by 17 nucleotidesB158DRAFT_2307 and B158DRAFT_2308 are separated by 21 nucleotides B158DRAFT_2306: B158DRAFT_2306 - tryptophanyl-tRNA synthetase (EC 6.1.1.2), at 467,079 to 468,296 _2306 B158DRAFT_2307: B158DRAFT_2307 - condensin subunit ScpA, at 468,314 to 469,231 _2307 B158DRAFT_2308: B158DRAFT_2308 - segregation and condensation protein B, at 469,253 to 470,206 _2308 Position (kb) 468 469 470Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 468.393 kb on + strandat 468.401 kb on - strandat 468.457 kb on - strand, within B158DRAFT_2307at 468.730 kb on - strand, within B158DRAFT_2307at 468.784 kb on - strand, within B158DRAFT_2307at 468.835 kb on + strand, within B158DRAFT_2307at 468.899 kb on + strand, within B158DRAFT_2307at 468.907 kb on - strand, within B158DRAFT_2307at 468.907 kb on - strand, within B158DRAFT_2307at 468.930 kb on + strand, within B158DRAFT_2307at 468.940 kb on + strand, within B158DRAFT_2307at 468.940 kb on + strand, within B158DRAFT_2307at 469.104 kb on + strand, within B158DRAFT_2307at 469.145 kb on + strandat 469.145 kb on + strandat 469.150 kb on + strandat 469.153 kb on - strandat 469.178 kb on - strandat 469.178 kb on - strandat 469.190 kb on + strandat 469.190 kb on + strandat 469.198 kb on - strandat 469.198 kb on - strandat 469.419 kb on + strand, within B158DRAFT_2308at 469.419 kb on + strand, within B158DRAFT_2308at 469.419 kb on + strand, within B158DRAFT_2308at 469.419 kb on + strand, within B158DRAFT_2308at 469.419 kb on + strand, within B158DRAFT_2308at 469.419 kb on + strand, within B158DRAFT_2308at 469.419 kb on + strand, within B158DRAFT_2308at 469.419 kb on + strand, within B158DRAFT_2308at 469.419 kb on + strand, within B158DRAFT_2308at 469.419 kb on + strand, within B158DRAFT_2308at 469.419 kb on + strand, within B158DRAFT_2308at 469.419 kb on + strand, within B158DRAFT_2308at 469.419 kb on + strand, within B158DRAFT_2308at 469.427 kb on - strand, within B158DRAFT_2308at 469.427 kb on - strand, within B158DRAFT_2308at 469.427 kb on - strand, within B158DRAFT_2308at 469.427 kb on - strand, within B158DRAFT_2308at 469.427 kb on - strand, within B158DRAFT_2308at 469.427 kb on - strand, within B158DRAFT_2308at 469.427 kb on - strand, within B158DRAFT_2308at 469.427 kb on - strand, within B158DRAFT_2308at 469.494 kb on + strand, within B158DRAFT_2308at 469.780 kb on - strand, within B158DRAFT_2308at 469.803 kb on - strand, within B158DRAFT_2308at 469.878 kb on + strand, within B158DRAFT_2308at 469.953 kb on - strand, within B158DRAFT_2308at 469.956 kb on + strand, within B158DRAFT_2308at 469.956 kb on + strand, within B158DRAFT_2308at 470.003 kb on + strand, within B158DRAFT_2308at 470.037 kb on - strand, within B158DRAFT_2308at 470.048 kb on + strand, within B158DRAFT_2308at 470.079 kb on + strand, within B158DRAFT_2308at 470.081 kb on + strand, within B158DRAFT_2308

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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468,393 + +1.5
468,401 - +0.9
468,457 - B158DRAFT_2307 0.16 +0.3
468,730 - B158DRAFT_2307 0.45 +2.3
468,784 - B158DRAFT_2307 0.51 +3.0
468,835 + B158DRAFT_2307 0.57 +2.8
468,899 + B158DRAFT_2307 0.64 +2.8
468,907 - B158DRAFT_2307 0.65 +3.3
468,907 - B158DRAFT_2307 0.65 +0.9
468,930 + B158DRAFT_2307 0.67 +2.3
468,940 + B158DRAFT_2307 0.68 +0.6
468,940 + B158DRAFT_2307 0.68 +2.2
469,104 + B158DRAFT_2307 0.86 +1.2
469,145 + -0.9
469,145 + -1.2
469,150 + -0.5
469,153 - -0.9
469,178 - +1.9
469,178 - +2.0
469,190 + -0.8
469,190 + +1.2
469,198 - +1.5
469,198 - +2.2
469,419 + B158DRAFT_2308 0.17 +2.0
469,419 + B158DRAFT_2308 0.17 +1.4
469,419 + B158DRAFT_2308 0.17 +2.3
469,419 + B158DRAFT_2308 0.17 +2.0
469,419 + B158DRAFT_2308 0.17 +0.8
469,419 + B158DRAFT_2308 0.17 +2.0
469,419 + B158DRAFT_2308 0.17 +1.5
469,419 + B158DRAFT_2308 0.17 +2.0
469,419 + B158DRAFT_2308 0.17 +2.8
469,419 + B158DRAFT_2308 0.17 +0.9
469,419 + B158DRAFT_2308 0.17 +1.2
469,419 + B158DRAFT_2308 0.17 +3.5
469,419 + B158DRAFT_2308 0.17 +1.5
469,427 - B158DRAFT_2308 0.18 +0.9
469,427 - B158DRAFT_2308 0.18 +2.0
469,427 - B158DRAFT_2308 0.18 +3.3
469,427 - B158DRAFT_2308 0.18 +1.2
469,427 - B158DRAFT_2308 0.18 +3.9
469,427 - B158DRAFT_2308 0.18 +4.1
469,427 - B158DRAFT_2308 0.18 +2.0
469,427 - B158DRAFT_2308 0.18 +2.0
469,494 + B158DRAFT_2308 0.25 +0.5
469,780 - B158DRAFT_2308 0.55 -0.7
469,803 - B158DRAFT_2308 0.58 +0.5
469,878 + B158DRAFT_2308 0.66 -2.2
469,953 - B158DRAFT_2308 0.73 -0.3
469,956 + B158DRAFT_2308 0.74 -0.8
469,956 + B158DRAFT_2308 0.74 -3.0
470,003 + B158DRAFT_2308 0.79 -0.1
470,037 - B158DRAFT_2308 0.82 -0.4
470,048 + B158DRAFT_2308 0.83 -0.8
470,079 + B158DRAFT_2308 0.87 +0.6
470,081 + B158DRAFT_2308 0.87 -0.4

Or see this region's nucleotide sequence