Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1973

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1972 and B158DRAFT_1973 are separated by 2 nucleotidesB158DRAFT_1973 and B158DRAFT_1974 overlap by 4 nucleotidesB158DRAFT_1974 and B158DRAFT_1975 are separated by 273 nucleotides B158DRAFT_1972: B158DRAFT_1972 - copper-(or silver)-translocating P-type ATPase/heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase, at 106,475 to 108,919 _1972 B158DRAFT_1973: B158DRAFT_1973 - cytochrome oxidase maturation protein, cbb3-type, at 108,922 to 109,233 _1973 B158DRAFT_1974: B158DRAFT_1974 - Uncharacterized conserved protein, at 109,230 to 109,958 _1974 B158DRAFT_1975: B158DRAFT_1975 - Ornithine carbamoyltransferase, at 110,232 to 111,239 _1975 Position (kb) 108 109 110Strain fitness (log2 ratio) -2 -1 0 1 2at 107.926 kb on + strand, within B158DRAFT_1972at 107.926 kb on + strand, within B158DRAFT_1972at 107.980 kb on - strand, within B158DRAFT_1972at 108.080 kb on + strand, within B158DRAFT_1972at 108.282 kb on - strand, within B158DRAFT_1972at 108.298 kb on + strand, within B158DRAFT_1972at 108.349 kb on - strand, within B158DRAFT_1972at 108.391 kb on + strand, within B158DRAFT_1972at 108.391 kb on + strand, within B158DRAFT_1972at 108.399 kb on - strand, within B158DRAFT_1972at 108.399 kb on - strand, within B158DRAFT_1972at 108.399 kb on - strand, within B158DRAFT_1972at 108.399 kb on - strand, within B158DRAFT_1972at 108.399 kb on - strand, within B158DRAFT_1972at 108.494 kb on + strand, within B158DRAFT_1972at 108.502 kb on - strand, within B158DRAFT_1972at 108.556 kb on + strand, within B158DRAFT_1972at 108.556 kb on + strand, within B158DRAFT_1972at 108.556 kb on + strand, within B158DRAFT_1972at 108.556 kb on + strand, within B158DRAFT_1972at 108.556 kb on + strand, within B158DRAFT_1972at 108.556 kb on + strand, within B158DRAFT_1972at 108.558 kb on + strand, within B158DRAFT_1972at 108.564 kb on - strand, within B158DRAFT_1972at 108.564 kb on - strand, within B158DRAFT_1972at 108.564 kb on - strand, within B158DRAFT_1972at 108.564 kb on - strand, within B158DRAFT_1972at 108.564 kb on - strand, within B158DRAFT_1972at 108.564 kb on - strand, within B158DRAFT_1972at 108.566 kb on - strand, within B158DRAFT_1972at 108.566 kb on - strand, within B158DRAFT_1972at 108.566 kb on - strand, within B158DRAFT_1972at 108.603 kb on - strand, within B158DRAFT_1972at 108.613 kb on - strand, within B158DRAFT_1972at 108.635 kb on - strand, within B158DRAFT_1972at 108.811 kb on + strandat 108.819 kb on - strandat 108.858 kb on + strandat 108.891 kb on + strandat 108.996 kb on + strand, within B158DRAFT_1973at 109.099 kb on - strand, within B158DRAFT_1973at 109.171 kb on + strand, within B158DRAFT_1973at 109.189 kb on - strand, within B158DRAFT_1973at 109.267 kb on - strandat 109.267 kb on - strandat 109.526 kb on - strand, within B158DRAFT_1974at 109.561 kb on + strand, within B158DRAFT_1974at 109.561 kb on + strand, within B158DRAFT_1974at 109.569 kb on - strand, within B158DRAFT_1974at 109.569 kb on - strand, within B158DRAFT_1974at 109.569 kb on - strand, within B158DRAFT_1974at 109.569 kb on - strand, within B158DRAFT_1974at 109.598 kb on - strand, within B158DRAFT_1974at 109.632 kb on + strand, within B158DRAFT_1974at 109.640 kb on - strand, within B158DRAFT_1974at 109.654 kb on - strand, within B158DRAFT_1974at 109.662 kb on - strand, within B158DRAFT_1974at 109.694 kb on + strand, within B158DRAFT_1974at 109.702 kb on - strand, within B158DRAFT_1974at 109.702 kb on - strand, within B158DRAFT_1974at 109.702 kb on - strand, within B158DRAFT_1974at 109.816 kb on + strand, within B158DRAFT_1974at 109.816 kb on + strand, within B158DRAFT_1974at 109.823 kb on + strand, within B158DRAFT_1974at 109.824 kb on - strand, within B158DRAFT_1974at 109.824 kb on - strand, within B158DRAFT_1974at 109.824 kb on - strand, within B158DRAFT_1974at 109.824 kb on - strand, within B158DRAFT_1974at 109.824 kb on - strand, within B158DRAFT_1974at 109.824 kb on - strand, within B158DRAFT_1974at 109.831 kb on - strand, within B158DRAFT_1974at 109.833 kb on + strand, within B158DRAFT_1974at 109.841 kb on - strand, within B158DRAFT_1974at 109.855 kb on - strand, within B158DRAFT_1974at 109.987 kb on + strandat 109.995 kb on - strandat 110.023 kb on + strandat 110.028 kb on + strandat 110.031 kb on - strandat 110.031 kb on - strandat 110.120 kb on + strandat 110.128 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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107,926 + B158DRAFT_1972 0.59 +0.2
107,926 + B158DRAFT_1972 0.59 +1.0
107,980 - B158DRAFT_1972 0.62 -0.1
108,080 + B158DRAFT_1972 0.66 +0.3
108,282 - B158DRAFT_1972 0.74 -0.4
108,298 + B158DRAFT_1972 0.75 -0.6
108,349 - B158DRAFT_1972 0.77 -0.6
108,391 + B158DRAFT_1972 0.78 -0.8
108,391 + B158DRAFT_1972 0.78 -0.3
108,399 - B158DRAFT_1972 0.79 -0.7
108,399 - B158DRAFT_1972 0.79 +1.1
108,399 - B158DRAFT_1972 0.79 -0.3
108,399 - B158DRAFT_1972 0.79 +0.9
108,399 - B158DRAFT_1972 0.79 -0.6
108,494 + B158DRAFT_1972 0.83 +0.5
108,502 - B158DRAFT_1972 0.83 -0.8
108,556 + B158DRAFT_1972 0.85 +0.5
108,556 + B158DRAFT_1972 0.85 -1.7
108,556 + B158DRAFT_1972 0.85 +0.4
108,556 + B158DRAFT_1972 0.85 +0.9
108,556 + B158DRAFT_1972 0.85 -0.9
108,556 + B158DRAFT_1972 0.85 +1.5
108,558 + B158DRAFT_1972 0.85 +0.1
108,564 - B158DRAFT_1972 0.85 +1.1
108,564 - B158DRAFT_1972 0.85 +0.2
108,564 - B158DRAFT_1972 0.85 +1.7
108,564 - B158DRAFT_1972 0.85 -0.4
108,564 - B158DRAFT_1972 0.85 +0.4
108,564 - B158DRAFT_1972 0.85 +0.5
108,566 - B158DRAFT_1972 0.86 +0.1
108,566 - B158DRAFT_1972 0.86 -1.2
108,566 - B158DRAFT_1972 0.86 +0.4
108,603 - B158DRAFT_1972 0.87 +1.4
108,613 - B158DRAFT_1972 0.87 +1.1
108,635 - B158DRAFT_1972 0.88 +0.2
108,811 + +0.8
108,819 - -0.5
108,858 + +0.1
108,891 + -1.6
108,996 + B158DRAFT_1973 0.24 +1.4
109,099 - B158DRAFT_1973 0.57 +0.0
109,171 + B158DRAFT_1973 0.80 -0.2
109,189 - B158DRAFT_1973 0.86 +2.1
109,267 - -0.1
109,267 - -0.2
109,526 - B158DRAFT_1974 0.41 +0.5
109,561 + B158DRAFT_1974 0.45 +0.6
109,561 + B158DRAFT_1974 0.45 +0.5
109,569 - B158DRAFT_1974 0.47 -0.7
109,569 - B158DRAFT_1974 0.47 -0.4
109,569 - B158DRAFT_1974 0.47 +1.0
109,569 - B158DRAFT_1974 0.47 -0.5
109,598 - B158DRAFT_1974 0.50 -1.5
109,632 + B158DRAFT_1974 0.55 -0.3
109,640 - B158DRAFT_1974 0.56 +0.4
109,654 - B158DRAFT_1974 0.58 +1.1
109,662 - B158DRAFT_1974 0.59 +0.3
109,694 + B158DRAFT_1974 0.64 +1.9
109,702 - B158DRAFT_1974 0.65 -1.3
109,702 - B158DRAFT_1974 0.65 +0.5
109,702 - B158DRAFT_1974 0.65 -0.6
109,816 + B158DRAFT_1974 0.80 -1.2
109,816 + B158DRAFT_1974 0.80 -1.0
109,823 + B158DRAFT_1974 0.81 -0.6
109,824 - B158DRAFT_1974 0.81 -0.4
109,824 - B158DRAFT_1974 0.81 -0.9
109,824 - B158DRAFT_1974 0.81 -0.8
109,824 - B158DRAFT_1974 0.81 +0.9
109,824 - B158DRAFT_1974 0.81 -0.1
109,824 - B158DRAFT_1974 0.81 +1.9
109,831 - B158DRAFT_1974 0.82 -1.1
109,833 + B158DRAFT_1974 0.83 -2.0
109,841 - B158DRAFT_1974 0.84 +0.6
109,855 - B158DRAFT_1974 0.86 -1.8
109,987 + -0.9
109,995 - +1.0
110,023 + -1.6
110,028 + +0.5
110,031 - -1.2
110,031 - -1.3
110,120 + +0.4
110,128 - -0.8

Or see this region's nucleotide sequence