Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1972 and B158DRAFT_1973 are separated by 2 nucleotides B158DRAFT_1973 and B158DRAFT_1974 overlap by 4 nucleotides B158DRAFT_1974 and B158DRAFT_1975 are separated by 273 nucleotides
B158DRAFT_1972: B158DRAFT_1972 - copper-(or silver)-translocating P-type ATPase/heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase, at 106,475 to 108,919
_1972
B158DRAFT_1973: B158DRAFT_1973 - cytochrome oxidase maturation protein, cbb3-type, at 108,922 to 109,233
_1973
B158DRAFT_1974: B158DRAFT_1974 - Uncharacterized conserved protein, at 109,230 to 109,958
_1974
B158DRAFT_1975: B158DRAFT_1975 - Ornithine carbamoyltransferase, at 110,232 to 111,239
_1975
Position (kb)
108
109
110 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 107.926 kb on + strand, within B158DRAFT_1972 at 107.926 kb on + strand, within B158DRAFT_1972 at 107.980 kb on - strand, within B158DRAFT_1972 at 108.080 kb on + strand, within B158DRAFT_1972 at 108.282 kb on - strand, within B158DRAFT_1972 at 108.298 kb on + strand, within B158DRAFT_1972 at 108.349 kb on - strand, within B158DRAFT_1972 at 108.391 kb on + strand, within B158DRAFT_1972 at 108.391 kb on + strand, within B158DRAFT_1972 at 108.399 kb on - strand, within B158DRAFT_1972 at 108.399 kb on - strand, within B158DRAFT_1972 at 108.399 kb on - strand, within B158DRAFT_1972 at 108.399 kb on - strand, within B158DRAFT_1972 at 108.399 kb on - strand, within B158DRAFT_1972 at 108.494 kb on + strand, within B158DRAFT_1972 at 108.502 kb on - strand, within B158DRAFT_1972 at 108.556 kb on + strand, within B158DRAFT_1972 at 108.556 kb on + strand, within B158DRAFT_1972 at 108.556 kb on + strand, within B158DRAFT_1972 at 108.556 kb on + strand, within B158DRAFT_1972 at 108.556 kb on + strand, within B158DRAFT_1972 at 108.556 kb on + strand, within B158DRAFT_1972 at 108.558 kb on + strand, within B158DRAFT_1972 at 108.564 kb on - strand, within B158DRAFT_1972 at 108.564 kb on - strand, within B158DRAFT_1972 at 108.564 kb on - strand, within B158DRAFT_1972 at 108.564 kb on - strand, within B158DRAFT_1972 at 108.564 kb on - strand, within B158DRAFT_1972 at 108.564 kb on - strand, within B158DRAFT_1972 at 108.566 kb on - strand, within B158DRAFT_1972 at 108.566 kb on - strand, within B158DRAFT_1972 at 108.566 kb on - strand, within B158DRAFT_1972 at 108.603 kb on - strand, within B158DRAFT_1972 at 108.613 kb on - strand, within B158DRAFT_1972 at 108.635 kb on - strand, within B158DRAFT_1972 at 108.811 kb on + strand at 108.819 kb on - strand at 108.858 kb on + strand at 108.891 kb on + strand at 108.996 kb on + strand, within B158DRAFT_1973 at 109.099 kb on - strand, within B158DRAFT_1973 at 109.171 kb on + strand, within B158DRAFT_1973 at 109.189 kb on - strand, within B158DRAFT_1973 at 109.267 kb on - strand at 109.267 kb on - strand at 109.526 kb on - strand, within B158DRAFT_1974 at 109.561 kb on + strand, within B158DRAFT_1974 at 109.561 kb on + strand, within B158DRAFT_1974 at 109.569 kb on - strand, within B158DRAFT_1974 at 109.569 kb on - strand, within B158DRAFT_1974 at 109.569 kb on - strand, within B158DRAFT_1974 at 109.569 kb on - strand, within B158DRAFT_1974 at 109.598 kb on - strand, within B158DRAFT_1974 at 109.632 kb on + strand, within B158DRAFT_1974 at 109.640 kb on - strand, within B158DRAFT_1974 at 109.654 kb on - strand, within B158DRAFT_1974 at 109.662 kb on - strand, within B158DRAFT_1974 at 109.694 kb on + strand, within B158DRAFT_1974 at 109.702 kb on - strand, within B158DRAFT_1974 at 109.702 kb on - strand, within B158DRAFT_1974 at 109.702 kb on - strand, within B158DRAFT_1974 at 109.816 kb on + strand, within B158DRAFT_1974 at 109.816 kb on + strand, within B158DRAFT_1974 at 109.823 kb on + strand, within B158DRAFT_1974 at 109.824 kb on - strand, within B158DRAFT_1974 at 109.824 kb on - strand, within B158DRAFT_1974 at 109.824 kb on - strand, within B158DRAFT_1974 at 109.824 kb on - strand, within B158DRAFT_1974 at 109.824 kb on - strand, within B158DRAFT_1974 at 109.824 kb on - strand, within B158DRAFT_1974 at 109.831 kb on - strand, within B158DRAFT_1974 at 109.833 kb on + strand, within B158DRAFT_1974 at 109.841 kb on - strand, within B158DRAFT_1974 at 109.855 kb on - strand, within B158DRAFT_1974 at 109.987 kb on + strand at 109.995 kb on - strand at 110.023 kb on + strand at 110.028 kb on + strand at 110.031 kb on - strand at 110.031 kb on - strand at 110.120 kb on + strand at 110.128 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 107,926 + B158DRAFT_1972 0.59 +0.2 107,926 + B158DRAFT_1972 0.59 +1.0 107,980 - B158DRAFT_1972 0.62 -0.1 108,080 + B158DRAFT_1972 0.66 +0.3 108,282 - B158DRAFT_1972 0.74 -0.4 108,298 + B158DRAFT_1972 0.75 -0.6 108,349 - B158DRAFT_1972 0.77 -0.6 108,391 + B158DRAFT_1972 0.78 -0.8 108,391 + B158DRAFT_1972 0.78 -0.3 108,399 - B158DRAFT_1972 0.79 -0.7 108,399 - B158DRAFT_1972 0.79 +1.1 108,399 - B158DRAFT_1972 0.79 -0.3 108,399 - B158DRAFT_1972 0.79 +0.9 108,399 - B158DRAFT_1972 0.79 -0.6 108,494 + B158DRAFT_1972 0.83 +0.5 108,502 - B158DRAFT_1972 0.83 -0.8 108,556 + B158DRAFT_1972 0.85 +0.5 108,556 + B158DRAFT_1972 0.85 -1.7 108,556 + B158DRAFT_1972 0.85 +0.4 108,556 + B158DRAFT_1972 0.85 +0.9 108,556 + B158DRAFT_1972 0.85 -0.9 108,556 + B158DRAFT_1972 0.85 +1.5 108,558 + B158DRAFT_1972 0.85 +0.1 108,564 - B158DRAFT_1972 0.85 +1.1 108,564 - B158DRAFT_1972 0.85 +0.2 108,564 - B158DRAFT_1972 0.85 +1.7 108,564 - B158DRAFT_1972 0.85 -0.4 108,564 - B158DRAFT_1972 0.85 +0.4 108,564 - B158DRAFT_1972 0.85 +0.5 108,566 - B158DRAFT_1972 0.86 +0.1 108,566 - B158DRAFT_1972 0.86 -1.2 108,566 - B158DRAFT_1972 0.86 +0.4 108,603 - B158DRAFT_1972 0.87 +1.4 108,613 - B158DRAFT_1972 0.87 +1.1 108,635 - B158DRAFT_1972 0.88 +0.2 108,811 + +0.8 108,819 - -0.5 108,858 + +0.1 108,891 + -1.6 108,996 + B158DRAFT_1973 0.24 +1.4 109,099 - B158DRAFT_1973 0.57 +0.0 109,171 + B158DRAFT_1973 0.80 -0.2 109,189 - B158DRAFT_1973 0.86 +2.1 109,267 - -0.1 109,267 - -0.2 109,526 - B158DRAFT_1974 0.41 +0.5 109,561 + B158DRAFT_1974 0.45 +0.6 109,561 + B158DRAFT_1974 0.45 +0.5 109,569 - B158DRAFT_1974 0.47 -0.7 109,569 - B158DRAFT_1974 0.47 -0.4 109,569 - B158DRAFT_1974 0.47 +1.0 109,569 - B158DRAFT_1974 0.47 -0.5 109,598 - B158DRAFT_1974 0.50 -1.5 109,632 + B158DRAFT_1974 0.55 -0.3 109,640 - B158DRAFT_1974 0.56 +0.4 109,654 - B158DRAFT_1974 0.58 +1.1 109,662 - B158DRAFT_1974 0.59 +0.3 109,694 + B158DRAFT_1974 0.64 +1.9 109,702 - B158DRAFT_1974 0.65 -1.3 109,702 - B158DRAFT_1974 0.65 +0.5 109,702 - B158DRAFT_1974 0.65 -0.6 109,816 + B158DRAFT_1974 0.80 -1.2 109,816 + B158DRAFT_1974 0.80 -1.0 109,823 + B158DRAFT_1974 0.81 -0.6 109,824 - B158DRAFT_1974 0.81 -0.4 109,824 - B158DRAFT_1974 0.81 -0.9 109,824 - B158DRAFT_1974 0.81 -0.8 109,824 - B158DRAFT_1974 0.81 +0.9 109,824 - B158DRAFT_1974 0.81 -0.1 109,824 - B158DRAFT_1974 0.81 +1.9 109,831 - B158DRAFT_1974 0.82 -1.1 109,833 + B158DRAFT_1974 0.83 -2.0 109,841 - B158DRAFT_1974 0.84 +0.6 109,855 - B158DRAFT_1974 0.86 -1.8 109,987 + -0.9 109,995 - +1.0 110,023 + -1.6 110,028 + +0.5 110,031 - -1.2 110,031 - -1.3 110,120 + +0.4 110,128 - -0.8
Or see this region's nucleotide sequence