Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1806

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1805 and B158DRAFT_1806 are separated by 70 nucleotidesB158DRAFT_1806 and B158DRAFT_1807 are separated by 82 nucleotides B158DRAFT_1805: B158DRAFT_1805 - NAD-dependent aldehyde dehydrogenases, at 1,903,352 to 1,904,872 _1805 B158DRAFT_1806: B158DRAFT_1806 - Glutamate dehydrogenase/leucine dehydrogenase, at 1,904,943 to 1,905,980 _1806 B158DRAFT_1807: B158DRAFT_1807 - hypothetical protein, at 1,906,063 to 1,907,289 _1807 Position (kb) 1904 1905 1906Strain fitness (log2 ratio) -1 0 1 2 3 4 5 6 7 8 9at 1904.174 kb on + strand, within B158DRAFT_1805at 1904.211 kb on + strand, within B158DRAFT_1805at 1904.223 kb on + strand, within B158DRAFT_1805at 1904.404 kb on + strand, within B158DRAFT_1805at 1904.503 kb on + strand, within B158DRAFT_1805at 1904.521 kb on + strand, within B158DRAFT_1805at 1904.596 kb on + strand, within B158DRAFT_1805at 1904.611 kb on + strand, within B158DRAFT_1805at 1904.789 kb on + strandat 1904.789 kb on + strandat 1904.818 kb on + strandat 1904.818 kb on + strandat 1904.818 kb on + strandat 1904.818 kb on + strandat 1904.818 kb on + strandat 1904.866 kb on + strandat 1906.068 kb on - strandat 1906.106 kb on - strandat 1906.124 kb on - strandat 1906.189 kb on + strand, within B158DRAFT_1807at 1906.213 kb on - strand, within B158DRAFT_1807at 1906.359 kb on + strand, within B158DRAFT_1807at 1906.359 kb on + strand, within B158DRAFT_1807at 1906.369 kb on - strand, within B158DRAFT_1807at 1906.398 kb on - strand, within B158DRAFT_1807at 1906.505 kb on + strand, within B158DRAFT_1807at 1906.505 kb on + strand, within B158DRAFT_1807at 1906.513 kb on - strand, within B158DRAFT_1807at 1906.515 kb on + strand, within B158DRAFT_1807at 1906.581 kb on + strand, within B158DRAFT_1807at 1906.589 kb on + strand, within B158DRAFT_1807at 1906.597 kb on - strand, within B158DRAFT_1807at 1906.652 kb on - strand, within B158DRAFT_1807at 1906.835 kb on + strand, within B158DRAFT_1807at 1906.865 kb on + strand, within B158DRAFT_1807at 1906.865 kb on + strand, within B158DRAFT_1807at 1906.896 kb on - strand, within B158DRAFT_1807at 1906.916 kb on + strand, within B158DRAFT_1807at 1906.916 kb on + strand, within B158DRAFT_1807at 1906.924 kb on - strand, within B158DRAFT_1807at 1906.930 kb on + strand, within B158DRAFT_1807at 1906.937 kb on + strand, within B158DRAFT_1807

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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1,904,174 + B158DRAFT_1805 0.54 +8.2
1,904,211 + B158DRAFT_1805 0.56 +3.7
1,904,223 + B158DRAFT_1805 0.57 +3.1
1,904,404 + B158DRAFT_1805 0.69 +7.9
1,904,503 + B158DRAFT_1805 0.76 +7.7
1,904,521 + B158DRAFT_1805 0.77 +8.8
1,904,596 + B158DRAFT_1805 0.82 +8.9
1,904,611 + B158DRAFT_1805 0.83 +9.5
1,904,789 + +9.2
1,904,789 + +7.4
1,904,818 + +8.0
1,904,818 + +7.7
1,904,818 + +9.2
1,904,818 + +8.7
1,904,818 + +9.1
1,904,866 + +2.6
1,906,068 - -0.5
1,906,106 - +0.4
1,906,124 - -0.4
1,906,189 + B158DRAFT_1807 0.10 +0.8
1,906,213 - B158DRAFT_1807 0.12 -0.5
1,906,359 + B158DRAFT_1807 0.24 +1.4
1,906,359 + B158DRAFT_1807 0.24 +0.4
1,906,369 - B158DRAFT_1807 0.25 +1.1
1,906,398 - B158DRAFT_1807 0.27 +0.5
1,906,505 + B158DRAFT_1807 0.36 +1.5
1,906,505 + B158DRAFT_1807 0.36 +2.2
1,906,513 - B158DRAFT_1807 0.37 +1.5
1,906,515 + B158DRAFT_1807 0.37 +1.0
1,906,581 + B158DRAFT_1807 0.42 +1.8
1,906,589 + B158DRAFT_1807 0.43 +0.6
1,906,597 - B158DRAFT_1807 0.44 +0.5
1,906,652 - B158DRAFT_1807 0.48 +1.5
1,906,835 + B158DRAFT_1807 0.63 +0.9
1,906,865 + B158DRAFT_1807 0.65 +1.0
1,906,865 + B158DRAFT_1807 0.65 +0.8
1,906,896 - B158DRAFT_1807 0.68 +0.1
1,906,916 + B158DRAFT_1807 0.70 +1.9
1,906,916 + B158DRAFT_1807 0.70 +1.3
1,906,924 - B158DRAFT_1807 0.70 +1.5
1,906,930 + B158DRAFT_1807 0.71 +0.5
1,906,937 + B158DRAFT_1807 0.71 -0.1

Or see this region's nucleotide sequence