Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1659

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1658 and B158DRAFT_1659 are separated by 291 nucleotidesB158DRAFT_1659 and B158DRAFT_1660 are separated by 12 nucleotides B158DRAFT_1658: B158DRAFT_1658 - hypothetical protein, at 1,728,620 to 1,730,056 _1658 B158DRAFT_1659: B158DRAFT_1659 - Cytochrome c5, at 1,730,348 to 1,730,950 _1659 B158DRAFT_1660: B158DRAFT_1660 - hypothetical protein, at 1,730,963 to 1,732,213 _1660 Position (kb) 1730 1731Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1729.487 kb on + strand, within B158DRAFT_1658at 1729.516 kb on + strand, within B158DRAFT_1658at 1729.737 kb on - strand, within B158DRAFT_1658at 1729.759 kb on - strand, within B158DRAFT_1658at 1729.905 kb on - strand, within B158DRAFT_1658at 1730.020 kb on - strandat 1730.065 kb on - strandat 1730.065 kb on - strandat 1730.079 kb on + strandat 1730.079 kb on + strandat 1730.087 kb on - strandat 1730.087 kb on - strandat 1730.087 kb on - strandat 1730.176 kb on - strandat 1730.393 kb on - strandat 1730.454 kb on - strand, within B158DRAFT_1659at 1730.535 kb on + strand, within B158DRAFT_1659at 1730.535 kb on + strand, within B158DRAFT_1659at 1730.535 kb on + strand, within B158DRAFT_1659at 1730.535 kb on + strand, within B158DRAFT_1659at 1730.543 kb on - strand, within B158DRAFT_1659at 1730.543 kb on - strand, within B158DRAFT_1659at 1730.543 kb on - strand, within B158DRAFT_1659at 1730.543 kb on - strand, within B158DRAFT_1659at 1730.550 kb on + strand, within B158DRAFT_1659at 1730.550 kb on + strand, within B158DRAFT_1659at 1730.634 kb on + strand, within B158DRAFT_1659at 1730.705 kb on + strand, within B158DRAFT_1659at 1730.839 kb on - strand, within B158DRAFT_1659at 1730.887 kb on - strand, within B158DRAFT_1659at 1730.962 kb on + strandat 1730.996 kb on + strandat 1731.181 kb on - strand, within B158DRAFT_1660at 1731.203 kb on + strand, within B158DRAFT_1660at 1731.229 kb on + strand, within B158DRAFT_1660at 1731.259 kb on + strand, within B158DRAFT_1660at 1731.259 kb on + strand, within B158DRAFT_1660at 1731.267 kb on - strand, within B158DRAFT_1660at 1731.267 kb on - strand, within B158DRAFT_1660at 1731.267 kb on - strand, within B158DRAFT_1660at 1731.285 kb on + strand, within B158DRAFT_1660at 1731.285 kb on + strand, within B158DRAFT_1660at 1731.285 kb on + strand, within B158DRAFT_1660at 1731.285 kb on + strand, within B158DRAFT_1660at 1731.285 kb on + strand, within B158DRAFT_1660at 1731.285 kb on + strand, within B158DRAFT_1660at 1731.285 kb on + strand, within B158DRAFT_1660at 1731.285 kb on + strand, within B158DRAFT_1660at 1731.293 kb on - strand, within B158DRAFT_1660at 1731.293 kb on - strand, within B158DRAFT_1660at 1731.293 kb on - strand, within B158DRAFT_1660at 1731.293 kb on - strand, within B158DRAFT_1660at 1731.293 kb on - strand, within B158DRAFT_1660at 1731.293 kb on - strand, within B158DRAFT_1660at 1731.293 kb on - strand, within B158DRAFT_1660at 1731.293 kb on - strand, within B158DRAFT_1660at 1731.293 kb on - strand, within B158DRAFT_1660at 1731.293 kb on - strand, within B158DRAFT_1660at 1731.293 kb on - strand, within B158DRAFT_1660at 1731.293 kb on - strand, within B158DRAFT_1660at 1731.293 kb on - strand, within B158DRAFT_1660at 1731.306 kb on + strand, within B158DRAFT_1660at 1731.337 kb on - strand, within B158DRAFT_1660at 1731.395 kb on - strand, within B158DRAFT_1660at 1731.455 kb on + strand, within B158DRAFT_1660at 1731.458 kb on - strand, within B158DRAFT_1660at 1731.609 kb on - strand, within B158DRAFT_1660at 1731.609 kb on - strand, within B158DRAFT_1660at 1731.609 kb on - strand, within B158DRAFT_1660at 1731.659 kb on + strand, within B158DRAFT_1660at 1731.689 kb on + strand, within B158DRAFT_1660at 1731.717 kb on + strand, within B158DRAFT_1660at 1731.850 kb on + strand, within B158DRAFT_1660at 1731.850 kb on + strand, within B158DRAFT_1660at 1731.858 kb on - strand, within B158DRAFT_1660at 1731.889 kb on + strand, within B158DRAFT_1660at 1731.890 kb on - strand, within B158DRAFT_1660

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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1,729,487 + B158DRAFT_1658 0.60 +1.1
1,729,516 + B158DRAFT_1658 0.62 -0.3
1,729,737 - B158DRAFT_1658 0.78 -1.1
1,729,759 - B158DRAFT_1658 0.79 -0.7
1,729,905 - B158DRAFT_1658 0.89 -0.2
1,730,020 - +0.3
1,730,065 - -0.0
1,730,065 - +0.9
1,730,079 + -0.9
1,730,079 + -0.2
1,730,087 - -2.6
1,730,087 - -0.6
1,730,087 - -2.4
1,730,176 - +0.2
1,730,393 - -1.6
1,730,454 - B158DRAFT_1659 0.18 -0.3
1,730,535 + B158DRAFT_1659 0.31 -0.8
1,730,535 + B158DRAFT_1659 0.31 -0.3
1,730,535 + B158DRAFT_1659 0.31 -0.0
1,730,535 + B158DRAFT_1659 0.31 -0.2
1,730,543 - B158DRAFT_1659 0.32 +0.6
1,730,543 - B158DRAFT_1659 0.32 -0.5
1,730,543 - B158DRAFT_1659 0.32 -0.3
1,730,543 - B158DRAFT_1659 0.32 +0.0
1,730,550 + B158DRAFT_1659 0.33 -1.1
1,730,550 + B158DRAFT_1659 0.33 -0.1
1,730,634 + B158DRAFT_1659 0.47 -0.5
1,730,705 + B158DRAFT_1659 0.59 +1.0
1,730,839 - B158DRAFT_1659 0.81 +0.2
1,730,887 - B158DRAFT_1659 0.89 -1.1
1,730,962 + +0.6
1,730,996 + -0.5
1,731,181 - B158DRAFT_1660 0.17 +1.0
1,731,203 + B158DRAFT_1660 0.19 -1.2
1,731,229 + B158DRAFT_1660 0.21 +2.3
1,731,259 + B158DRAFT_1660 0.24 +3.2
1,731,259 + B158DRAFT_1660 0.24 -1.3
1,731,267 - B158DRAFT_1660 0.24 -0.4
1,731,267 - B158DRAFT_1660 0.24 -1.3
1,731,267 - B158DRAFT_1660 0.24 -1.1
1,731,285 + B158DRAFT_1660 0.26 -1.9
1,731,285 + B158DRAFT_1660 0.26 +1.0
1,731,285 + B158DRAFT_1660 0.26 -1.0
1,731,285 + B158DRAFT_1660 0.26 -0.2
1,731,285 + B158DRAFT_1660 0.26 +2.9
1,731,285 + B158DRAFT_1660 0.26 +0.9
1,731,285 + B158DRAFT_1660 0.26 -1.6
1,731,285 + B158DRAFT_1660 0.26 -1.0
1,731,293 - B158DRAFT_1660 0.26 -0.4
1,731,293 - B158DRAFT_1660 0.26 -1.0
1,731,293 - B158DRAFT_1660 0.26 -0.1
1,731,293 - B158DRAFT_1660 0.26 +2.0
1,731,293 - B158DRAFT_1660 0.26 -0.5
1,731,293 - B158DRAFT_1660 0.26 -0.8
1,731,293 - B158DRAFT_1660 0.26 +0.0
1,731,293 - B158DRAFT_1660 0.26 +0.2
1,731,293 - B158DRAFT_1660 0.26 -0.4
1,731,293 - B158DRAFT_1660 0.26 -1.2
1,731,293 - B158DRAFT_1660 0.26 +0.2
1,731,293 - B158DRAFT_1660 0.26 +0.3
1,731,293 - B158DRAFT_1660 0.26 +0.2
1,731,306 + B158DRAFT_1660 0.27 +0.2
1,731,337 - B158DRAFT_1660 0.30 -0.7
1,731,395 - B158DRAFT_1660 0.35 +1.4
1,731,455 + B158DRAFT_1660 0.39 +0.4
1,731,458 - B158DRAFT_1660 0.40 -0.7
1,731,609 - B158DRAFT_1660 0.52 +0.2
1,731,609 - B158DRAFT_1660 0.52 +1.3
1,731,609 - B158DRAFT_1660 0.52 -1.4
1,731,659 + B158DRAFT_1660 0.56 -0.8
1,731,689 + B158DRAFT_1660 0.58 -0.4
1,731,717 + B158DRAFT_1660 0.60 -1.1
1,731,850 + B158DRAFT_1660 0.71 -0.6
1,731,850 + B158DRAFT_1660 0.71 -1.8
1,731,858 - B158DRAFT_1660 0.72 +0.4
1,731,889 + B158DRAFT_1660 0.74 -0.5
1,731,890 - B158DRAFT_1660 0.74 -1.0

Or see this region's nucleotide sequence