Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1390 and B158DRAFT_1391 are separated by 10 nucleotides B158DRAFT_1391 and B158DRAFT_1392 are separated by 9 nucleotides B158DRAFT_1392 and B158DRAFT_1393 are separated by 5 nucleotides B158DRAFT_1393 and B158DRAFT_1394 are separated by 137 nucleotides
B158DRAFT_1390: B158DRAFT_1390 - sulfur relay protein, TusE/DsrC/DsvC family, at 1,435,500 to 1,435,826
_1390
B158DRAFT_1391: B158DRAFT_1391 - sulfur relay protein TusB/DsrH, at 1,435,837 to 1,436,109
_1391
B158DRAFT_1392: B158DRAFT_1392 - sulfur relay protein TusC/DsrF, at 1,436,119 to 1,436,484
_1392
B158DRAFT_1393: B158DRAFT_1393 - sulfur relay protein TusD/DsrE, at 1,436,490 to 1,436,882
_1393
B158DRAFT_1394: B158DRAFT_1394 - Peptidase family M49., at 1,437,020 to 1,438,753
_1394
Position (kb)
1436
1437 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 1435.499 kb on + strand at 1436.117 kb on - strand at 1436.915 kb on - strand at 1436.915 kb on - strand at 1436.915 kb on - strand at 1436.915 kb on - strand at 1436.915 kb on - strand at 1436.930 kb on - strand at 1436.947 kb on - strand at 1437.006 kb on + strand at 1437.022 kb on + strand at 1437.047 kb on - strand at 1437.047 kb on - strand at 1437.235 kb on + strand, within B158DRAFT_1394 at 1437.236 kb on - strand, within B158DRAFT_1394 at 1437.345 kb on + strand, within B158DRAFT_1394 at 1437.345 kb on + strand, within B158DRAFT_1394 at 1437.345 kb on + strand, within B158DRAFT_1394 at 1437.348 kb on - strand, within B158DRAFT_1394 at 1437.353 kb on - strand, within B158DRAFT_1394 at 1437.353 kb on - strand, within B158DRAFT_1394 at 1437.358 kb on - strand, within B158DRAFT_1394 at 1437.383 kb on - strand, within B158DRAFT_1394 at 1437.442 kb on - strand, within B158DRAFT_1394 at 1437.461 kb on - strand, within B158DRAFT_1394 at 1437.559 kb on + strand, within B158DRAFT_1394 at 1437.601 kb on - strand, within B158DRAFT_1394 at 1437.693 kb on + strand, within B158DRAFT_1394 at 1437.727 kb on + strand, within B158DRAFT_1394 at 1437.741 kb on + strand, within B158DRAFT_1394 at 1437.763 kb on + strand, within B158DRAFT_1394 at 1437.766 kb on - strand, within B158DRAFT_1394 at 1437.766 kb on - strand, within B158DRAFT_1394 at 1437.768 kb on + strand, within B158DRAFT_1394 at 1437.810 kb on - strand, within B158DRAFT_1394 at 1437.827 kb on + strand, within B158DRAFT_1394 at 1437.835 kb on - strand, within B158DRAFT_1394 at 1437.850 kb on - strand, within B158DRAFT_1394
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 1,435,499 + -2.0 1,436,117 - +0.4 1,436,915 - -0.5 1,436,915 - +0.6 1,436,915 - +1.3 1,436,915 - +0.1 1,436,915 - +0.2 1,436,930 - +1.0 1,436,947 - +0.6 1,437,006 + +0.1 1,437,022 + -1.3 1,437,047 - +1.0 1,437,047 - -1.3 1,437,235 + B158DRAFT_1394 0.12 -1.2 1,437,236 - B158DRAFT_1394 0.12 -0.1 1,437,345 + B158DRAFT_1394 0.19 -0.3 1,437,345 + B158DRAFT_1394 0.19 -0.6 1,437,345 + B158DRAFT_1394 0.19 -1.0 1,437,348 - B158DRAFT_1394 0.19 -1.2 1,437,353 - B158DRAFT_1394 0.19 -0.4 1,437,353 - B158DRAFT_1394 0.19 +3.3 1,437,358 - B158DRAFT_1394 0.19 -0.5 1,437,383 - B158DRAFT_1394 0.21 -0.9 1,437,442 - B158DRAFT_1394 0.24 -0.1 1,437,461 - B158DRAFT_1394 0.25 +0.9 1,437,559 + B158DRAFT_1394 0.31 +0.4 1,437,601 - B158DRAFT_1394 0.34 +0.1 1,437,693 + B158DRAFT_1394 0.39 -1.1 1,437,727 + B158DRAFT_1394 0.41 +0.6 1,437,741 + B158DRAFT_1394 0.42 -1.0 1,437,763 + B158DRAFT_1394 0.43 -0.0 1,437,766 - B158DRAFT_1394 0.43 +0.2 1,437,766 - B158DRAFT_1394 0.43 -0.8 1,437,768 + B158DRAFT_1394 0.43 -0.8 1,437,810 - B158DRAFT_1394 0.46 -0.6 1,437,827 + B158DRAFT_1394 0.47 -0.4 1,437,835 - B158DRAFT_1394 0.47 -1.0 1,437,850 - B158DRAFT_1394 0.48 +5.2
Or see this region's nucleotide sequence