Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1097

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1095 and B158DRAFT_1096 are separated by 123 nucleotidesB158DRAFT_1096 and B158DRAFT_1097 are separated by 55 nucleotidesB158DRAFT_1097 and B158DRAFT_1098 are separated by 378 nucleotidesB158DRAFT_1098 and B158DRAFT_1099 are separated by 49 nucleotides B158DRAFT_1095: B158DRAFT_1095 - DNA-directed DNA polymerase III (polc), at 1,132,334 to 1,135,819 _1095 B158DRAFT_1096: B158DRAFT_1096 - hypothetical protein, at 1,135,943 to 1,136,329 _1096 B158DRAFT_1097: B158DRAFT_1097 - Predicted transcription factor, homolog of eukaryotic MBF1, at 1,136,385 to 1,136,921 _1097 B158DRAFT_1098: B158DRAFT_1098 - hypothetical protein, at 1,137,300 to 1,137,857 _1098 B158DRAFT_1099: B158DRAFT_1099 - Putative NADP-dependent oxidoreductases, at 1,137,907 to 1,138,938 _1099 Position (kb) 1136 1137Strain fitness (log2 ratio) -2 -1 0 1 2at 1135.852 kb on + strandat 1135.859 kb on + strandat 1135.872 kb on + strandat 1135.880 kb on - strandat 1135.880 kb on - strandat 1135.973 kb on + strandat 1136.135 kb on + strand, within B158DRAFT_1096at 1136.143 kb on - strand, within B158DRAFT_1096at 1136.188 kb on - strand, within B158DRAFT_1096at 1136.192 kb on + strand, within B158DRAFT_1096at 1136.250 kb on + strand, within B158DRAFT_1096at 1136.327 kb on + strandat 1136.347 kb on - strandat 1136.355 kb on + strandat 1136.355 kb on + strandat 1136.363 kb on - strandat 1136.363 kb on - strandat 1136.452 kb on - strand, within B158DRAFT_1097at 1136.453 kb on + strand, within B158DRAFT_1097at 1136.453 kb on + strand, within B158DRAFT_1097at 1136.461 kb on - strand, within B158DRAFT_1097at 1136.461 kb on - strand, within B158DRAFT_1097at 1136.461 kb on - strand, within B158DRAFT_1097at 1136.461 kb on - strand, within B158DRAFT_1097at 1136.461 kb on - strand, within B158DRAFT_1097at 1136.461 kb on - strand, within B158DRAFT_1097at 1136.461 kb on - strand, within B158DRAFT_1097at 1136.515 kb on - strand, within B158DRAFT_1097at 1136.568 kb on + strand, within B158DRAFT_1097at 1136.596 kb on - strand, within B158DRAFT_1097at 1136.658 kb on - strand, within B158DRAFT_1097at 1136.658 kb on - strand, within B158DRAFT_1097at 1136.706 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.720 kb on + strand, within B158DRAFT_1097at 1136.728 kb on - strand, within B158DRAFT_1097at 1136.728 kb on - strand, within B158DRAFT_1097at 1136.728 kb on - strand, within B158DRAFT_1097at 1136.728 kb on - strand, within B158DRAFT_1097at 1136.728 kb on - strand, within B158DRAFT_1097at 1136.728 kb on - strand, within B158DRAFT_1097at 1136.728 kb on - strand, within B158DRAFT_1097at 1136.728 kb on - strand, within B158DRAFT_1097at 1136.728 kb on - strand, within B158DRAFT_1097at 1136.733 kb on - strand, within B158DRAFT_1097at 1136.737 kb on + strand, within B158DRAFT_1097at 1136.737 kb on + strand, within B158DRAFT_1097at 1136.737 kb on + strand, within B158DRAFT_1097at 1136.738 kb on - strand, within B158DRAFT_1097at 1136.745 kb on - strand, within B158DRAFT_1097at 1136.747 kb on + strand, within B158DRAFT_1097at 1136.747 kb on + strand, within B158DRAFT_1097at 1136.747 kb on + strand, within B158DRAFT_1097at 1136.747 kb on + strand, within B158DRAFT_1097at 1136.747 kb on + strand, within B158DRAFT_1097at 1136.747 kb on + strand, within B158DRAFT_1097at 1136.755 kb on - strand, within B158DRAFT_1097at 1136.755 kb on - strand, within B158DRAFT_1097at 1136.755 kb on - strand, within B158DRAFT_1097at 1136.755 kb on - strand, within B158DRAFT_1097at 1136.755 kb on - strand, within B158DRAFT_1097at 1136.777 kb on - strand, within B158DRAFT_1097at 1136.814 kb on + strand, within B158DRAFT_1097at 1136.874 kb on + strandat 1136.882 kb on - strandat 1136.887 kb on - strandat 1136.887 kb on - strandat 1136.937 kb on + strandat 1136.939 kb on + strandat 1136.947 kb on - strandat 1136.955 kb on + strandat 1136.955 kb on + strandat 1136.960 kb on + strandat 1137.031 kb on + strandat 1137.031 kb on + strandat 1137.039 kb on - strandat 1137.039 kb on - strandat 1137.116 kb on - strandat 1137.117 kb on + strandat 1137.118 kb on - strandat 1137.120 kb on + strandat 1137.169 kb on + strandat 1137.169 kb on + strandat 1137.292 kb on + strandat 1137.342 kb on - strandat 1137.398 kb on - strand, within B158DRAFT_1098at 1137.426 kb on + strand, within B158DRAFT_1098at 1137.465 kb on + strand, within B158DRAFT_1098at 1137.481 kb on + strand, within B158DRAFT_1098at 1137.681 kb on + strand, within B158DRAFT_1098at 1137.820 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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1,135,852 + -2.1
1,135,859 + -0.2
1,135,872 + +0.0
1,135,880 - +1.1
1,135,880 - -0.5
1,135,973 + -1.0
1,136,135 + B158DRAFT_1096 0.50 -0.1
1,136,143 - B158DRAFT_1096 0.52 -1.2
1,136,188 - B158DRAFT_1096 0.63 -1.9
1,136,192 + B158DRAFT_1096 0.64 +0.5
1,136,250 + B158DRAFT_1096 0.79 -0.2
1,136,327 + -0.1
1,136,347 - +0.5
1,136,355 + +0.2
1,136,355 + -0.2
1,136,363 - -0.9
1,136,363 - -0.4
1,136,452 - B158DRAFT_1097 0.12 +0.8
1,136,453 + B158DRAFT_1097 0.13 -0.5
1,136,453 + B158DRAFT_1097 0.13 -1.2
1,136,461 - B158DRAFT_1097 0.14 -2.2
1,136,461 - B158DRAFT_1097 0.14 -0.9
1,136,461 - B158DRAFT_1097 0.14 -0.5
1,136,461 - B158DRAFT_1097 0.14 -0.9
1,136,461 - B158DRAFT_1097 0.14 -2.1
1,136,461 - B158DRAFT_1097 0.14 -1.9
1,136,461 - B158DRAFT_1097 0.14 +1.2
1,136,515 - B158DRAFT_1097 0.24 +0.6
1,136,568 + B158DRAFT_1097 0.34 +1.1
1,136,596 - B158DRAFT_1097 0.39 -1.0
1,136,658 - B158DRAFT_1097 0.51 -0.8
1,136,658 - B158DRAFT_1097 0.51 -1.8
1,136,706 + B158DRAFT_1097 0.60 -0.8
1,136,720 + B158DRAFT_1097 0.62 -0.4
1,136,720 + B158DRAFT_1097 0.62 -0.7
1,136,720 + B158DRAFT_1097 0.62 -1.0
1,136,720 + B158DRAFT_1097 0.62 -0.4
1,136,720 + B158DRAFT_1097 0.62 +0.8
1,136,720 + B158DRAFT_1097 0.62 -1.0
1,136,720 + B158DRAFT_1097 0.62 -1.0
1,136,720 + B158DRAFT_1097 0.62 -0.6
1,136,720 + B158DRAFT_1097 0.62 +0.0
1,136,720 + B158DRAFT_1097 0.62 -1.1
1,136,720 + B158DRAFT_1097 0.62 -2.0
1,136,720 + B158DRAFT_1097 0.62 -1.5
1,136,720 + B158DRAFT_1097 0.62 -0.2
1,136,720 + B158DRAFT_1097 0.62 -0.4
1,136,720 + B158DRAFT_1097 0.62 +0.1
1,136,720 + B158DRAFT_1097 0.62 -1.1
1,136,720 + B158DRAFT_1097 0.62 -0.3
1,136,720 + B158DRAFT_1097 0.62 -0.8
1,136,720 + B158DRAFT_1097 0.62 +1.6
1,136,720 + B158DRAFT_1097 0.62 +0.1
1,136,728 - B158DRAFT_1097 0.64 -0.8
1,136,728 - B158DRAFT_1097 0.64 -1.8
1,136,728 - B158DRAFT_1097 0.64 -0.9
1,136,728 - B158DRAFT_1097 0.64 +0.7
1,136,728 - B158DRAFT_1097 0.64 -1.7
1,136,728 - B158DRAFT_1097 0.64 -1.6
1,136,728 - B158DRAFT_1097 0.64 -0.2
1,136,728 - B158DRAFT_1097 0.64 -0.7
1,136,728 - B158DRAFT_1097 0.64 -1.8
1,136,733 - B158DRAFT_1097 0.65 -1.1
1,136,737 + B158DRAFT_1097 0.66 -1.6
1,136,737 + B158DRAFT_1097 0.66 -1.4
1,136,737 + B158DRAFT_1097 0.66 -0.8
1,136,738 - B158DRAFT_1097 0.66 -0.1
1,136,745 - B158DRAFT_1097 0.67 -0.6
1,136,747 + B158DRAFT_1097 0.67 -0.9
1,136,747 + B158DRAFT_1097 0.67 -0.7
1,136,747 + B158DRAFT_1097 0.67 -0.6
1,136,747 + B158DRAFT_1097 0.67 -0.8
1,136,747 + B158DRAFT_1097 0.67 -0.3
1,136,747 + B158DRAFT_1097 0.67 +0.2
1,136,755 - B158DRAFT_1097 0.69 +0.5
1,136,755 - B158DRAFT_1097 0.69 -1.2
1,136,755 - B158DRAFT_1097 0.69 +2.0
1,136,755 - B158DRAFT_1097 0.69 -0.3
1,136,755 - B158DRAFT_1097 0.69 -1.2
1,136,777 - B158DRAFT_1097 0.73 -0.4
1,136,814 + B158DRAFT_1097 0.80 +0.1
1,136,874 + +0.5
1,136,882 - -2.3
1,136,887 - +2.1
1,136,887 - -1.5
1,136,937 + -0.4
1,136,939 + -0.5
1,136,947 - -1.8
1,136,955 + -0.1
1,136,955 + -0.5
1,136,960 + -0.2
1,137,031 + -0.8
1,137,031 + +0.2
1,137,039 - -0.5
1,137,039 - -1.0
1,137,116 - -1.4
1,137,117 + -1.3
1,137,118 - -0.4
1,137,120 + -0.5
1,137,169 + -0.1
1,137,169 + +1.9
1,137,292 + -0.2
1,137,342 - -1.3
1,137,398 - B158DRAFT_1098 0.18 -0.7
1,137,426 + B158DRAFT_1098 0.23 +1.3
1,137,465 + B158DRAFT_1098 0.30 -0.8
1,137,481 + B158DRAFT_1098 0.32 +0.3
1,137,681 + B158DRAFT_1098 0.68 -2.4
1,137,820 - -0.0

Or see this region's nucleotide sequence