Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0738 and B158DRAFT_0739 overlap by 1 nucleotides B158DRAFT_0739 and B158DRAFT_0740 are separated by 20 nucleotides B158DRAFT_0740 and B158DRAFT_0741 are separated by 23 nucleotides B158DRAFT_0741 and B158DRAFT_0742 are separated by 35 nucleotides
B158DRAFT_0738: B158DRAFT_0738 - Twin arginine targeting (Tat) protein translocase TatC, at 743,424 to 744,200
_0738
B158DRAFT_0739: B158DRAFT_0739 - twin arginine-targeting protein translocase TatB, at 744,200 to 744,574
_0739
B158DRAFT_0740: B158DRAFT_0740 - twin arginine-targeting protein translocase, TatA/E family, at 744,595 to 744,837
_0740
B158DRAFT_0741: B158DRAFT_0741 - Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases, at 744,861 to 745,199
_0741
B158DRAFT_0742: B158DRAFT_0742 - 2-octaprenylphenol hydroxylase (EC 1.14.13.-), at 745,235 to 746,881
_0742
Position (kb) 744
745 Strain fitness (log2 ratio) -1
0
1
2
3 at 743.649 kb on + strand, within B158DRAFT_0738 at 743.662 kb on - strand, within B158DRAFT_0738 at 743.710 kb on + strand, within B158DRAFT_0738 at 743.755 kb on + strand, within B158DRAFT_0738 at 743.842 kb on + strand, within B158DRAFT_0738 at 743.900 kb on + strand, within B158DRAFT_0738 at 743.900 kb on + strand, within B158DRAFT_0738 at 744.141 kb on - strand at 744.215 kb on - strand at 744.225 kb on - strand at 744.263 kb on - strand, within B158DRAFT_0739 at 744.282 kb on - strand, within B158DRAFT_0739 at 744.294 kb on - strand, within B158DRAFT_0739 at 744.345 kb on + strand, within B158DRAFT_0739 at 744.353 kb on - strand, within B158DRAFT_0739 at 744.353 kb on - strand, within B158DRAFT_0739 at 744.489 kb on + strand, within B158DRAFT_0739 at 744.489 kb on + strand, within B158DRAFT_0739 at 744.489 kb on + strand, within B158DRAFT_0739 at 744.497 kb on - strand, within B158DRAFT_0739 at 744.497 kb on - strand, within B158DRAFT_0739 at 744.497 kb on - strand, within B158DRAFT_0739 at 744.623 kb on - strand, within B158DRAFT_0740 at 744.623 kb on - strand, within B158DRAFT_0740 at 744.651 kb on + strand, within B158DRAFT_0740 at 744.651 kb on + strand, within B158DRAFT_0740 at 744.805 kb on + strand, within B158DRAFT_0740 at 744.853 kb on - strand at 744.917 kb on + strand, within B158DRAFT_0741 at 744.925 kb on - strand, within B158DRAFT_0741 at 744.974 kb on - strand, within B158DRAFT_0741 at 745.067 kb on + strand, within B158DRAFT_0741 at 745.089 kb on + strand, within B158DRAFT_0741 at 745.089 kb on + strand, within B158DRAFT_0741 at 745.097 kb on - strand, within B158DRAFT_0741 at 745.481 kb on + strand, within B158DRAFT_0742
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 743,649 + B158DRAFT_0738 0.29 +2.7 743,662 - B158DRAFT_0738 0.31 +2.1 743,710 + B158DRAFT_0738 0.37 +2.9 743,755 + B158DRAFT_0738 0.43 +1.9 743,842 + B158DRAFT_0738 0.54 +2.5 743,900 + B158DRAFT_0738 0.61 +2.4 743,900 + B158DRAFT_0738 0.61 +2.9 744,141 - +2.6 744,215 - +0.9 744,225 - +1.1 744,263 - B158DRAFT_0739 0.17 +1.3 744,282 - B158DRAFT_0739 0.22 +0.5 744,294 - B158DRAFT_0739 0.25 +2.1 744,345 + B158DRAFT_0739 0.39 +1.8 744,353 - B158DRAFT_0739 0.41 +2.3 744,353 - B158DRAFT_0739 0.41 +2.1 744,489 + B158DRAFT_0739 0.77 +0.7 744,489 + B158DRAFT_0739 0.77 +1.4 744,489 + B158DRAFT_0739 0.77 +2.0 744,497 - B158DRAFT_0739 0.79 +2.8 744,497 - B158DRAFT_0739 0.79 +2.8 744,497 - B158DRAFT_0739 0.79 +1.8 744,623 - B158DRAFT_0740 0.12 +0.6 744,623 - B158DRAFT_0740 0.12 +0.7 744,651 + B158DRAFT_0740 0.23 +2.7 744,651 + B158DRAFT_0740 0.23 +2.1 744,805 + B158DRAFT_0740 0.86 +2.8 744,853 - +2.4 744,917 + B158DRAFT_0741 0.17 +1.2 744,925 - B158DRAFT_0741 0.19 +1.6 744,974 - B158DRAFT_0741 0.33 -0.3 745,067 + B158DRAFT_0741 0.61 -1.6 745,089 + B158DRAFT_0741 0.67 -1.3 745,089 + B158DRAFT_0741 0.67 +0.4 745,097 - B158DRAFT_0741 0.70 -0.2 745,481 + B158DRAFT_0742 0.15 +1.3
Or see this region's nucleotide sequence