Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0708 and B158DRAFT_0709 are separated by 159 nucleotides B158DRAFT_0709 and B158DRAFT_0710 are separated by 32 nucleotides B158DRAFT_0710 and B158DRAFT_0711 are separated by 27 nucleotides B158DRAFT_0711 and B158DRAFT_0712 overlap by 1 nucleotides
B158DRAFT_0708: B158DRAFT_0708 - Membrane protein implicated in regulation of membrane protease activity, at 709,548 to 710,027
_0708
B158DRAFT_0709: B158DRAFT_0709 - Rhodanese-related sulfurtransferase, at 710,187 to 710,612
_0709
B158DRAFT_0710: B158DRAFT_0710 - Glutaredoxin, GrxC family, at 710,645 to 710,905
_0710
B158DRAFT_0711: B158DRAFT_0711 - protein translocase subunit secB, at 710,933 to 711,439
_0711
B158DRAFT_0712: B158DRAFT_0712 - Glycerol-3-phosphate dehydrogenase, at 711,439 to 712,449
_0712
Position (kb) 710
711
712 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 709.934 kb on + strand, within B158DRAFT_0708 at 709.948 kb on + strand, within B158DRAFT_0708 at 709.948 kb on + strand, within B158DRAFT_0708 at 709.956 kb on - strand, within B158DRAFT_0708 at 709.956 kb on - strand, within B158DRAFT_0708 at 709.957 kb on - strand, within B158DRAFT_0708 at 709.980 kb on - strand at 709.987 kb on - strand at 709.999 kb on + strand at 709.999 kb on + strand at 709.999 kb on + strand at 710.007 kb on - strand at 710.007 kb on - strand at 710.021 kb on + strand at 710.021 kb on + strand at 710.021 kb on + strand at 710.027 kb on + strand at 710.029 kb on - strand at 710.029 kb on - strand at 710.029 kb on - strand at 710.029 kb on - strand at 710.030 kb on - strand at 710.045 kb on + strand at 710.053 kb on - strand at 710.055 kb on + strand at 710.074 kb on - strand at 710.115 kb on + strand at 710.115 kb on + strand at 710.115 kb on + strand at 710.115 kb on + strand at 710.115 kb on + strand at 710.115 kb on + strand at 710.123 kb on - strand at 710.123 kb on - strand at 710.123 kb on - strand at 710.123 kb on - strand at 710.123 kb on - strand at 710.132 kb on + strand at 710.140 kb on - strand at 710.223 kb on + strand at 710.231 kb on - strand, within B158DRAFT_0709 at 710.244 kb on + strand, within B158DRAFT_0709 at 710.253 kb on - strand, within B158DRAFT_0709 at 710.273 kb on + strand, within B158DRAFT_0709 at 710.281 kb on - strand, within B158DRAFT_0709 at 710.281 kb on - strand, within B158DRAFT_0709 at 710.293 kb on + strand, within B158DRAFT_0709 at 710.300 kb on + strand, within B158DRAFT_0709 at 710.357 kb on - strand, within B158DRAFT_0709 at 710.384 kb on - strand, within B158DRAFT_0709 at 710.397 kb on - strand, within B158DRAFT_0709 at 710.470 kb on + strand, within B158DRAFT_0709 at 710.493 kb on + strand, within B158DRAFT_0709 at 710.501 kb on - strand, within B158DRAFT_0709 at 710.562 kb on + strand, within B158DRAFT_0709 at 710.573 kb on + strand at 710.753 kb on + strand, within B158DRAFT_0710 at 710.916 kb on + strand at 710.929 kb on + strand at 710.929 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 709,934 + B158DRAFT_0708 0.80 +0.1 709,948 + B158DRAFT_0708 0.83 -1.9 709,948 + B158DRAFT_0708 0.83 -0.5 709,956 - B158DRAFT_0708 0.85 -0.0 709,956 - B158DRAFT_0708 0.85 -1.4 709,957 - B158DRAFT_0708 0.85 -1.4 709,980 - +0.0 709,987 - +1.0 709,999 + -0.2 709,999 + +0.4 709,999 + -0.1 710,007 - +0.5 710,007 - -0.1 710,021 + -0.4 710,021 + -1.5 710,021 + -2.1 710,027 + +0.5 710,029 - -0.1 710,029 - -0.9 710,029 - +0.1 710,029 - +0.6 710,030 - -0.3 710,045 + -0.0 710,053 - -0.2 710,055 + +0.2 710,074 - -1.8 710,115 + -1.2 710,115 + +0.9 710,115 + -0.9 710,115 + -0.2 710,115 + +0.7 710,115 + +0.7 710,123 - -1.3 710,123 - +0.2 710,123 - +0.7 710,123 - -1.0 710,123 - -1.6 710,132 + -0.0 710,140 - -0.6 710,223 + +0.3 710,231 - B158DRAFT_0709 0.10 -1.5 710,244 + B158DRAFT_0709 0.13 -1.3 710,253 - B158DRAFT_0709 0.15 -0.6 710,273 + B158DRAFT_0709 0.20 -2.3 710,281 - B158DRAFT_0709 0.22 -0.9 710,281 - B158DRAFT_0709 0.22 -2.0 710,293 + B158DRAFT_0709 0.25 -2.1 710,300 + B158DRAFT_0709 0.27 +3.6 710,357 - B158DRAFT_0709 0.40 -1.0 710,384 - B158DRAFT_0709 0.46 +0.6 710,397 - B158DRAFT_0709 0.49 -0.3 710,470 + B158DRAFT_0709 0.66 +0.7 710,493 + B158DRAFT_0709 0.72 +0.2 710,501 - B158DRAFT_0709 0.74 +1.8 710,562 + B158DRAFT_0709 0.88 -0.9 710,573 + -2.2 710,753 + B158DRAFT_0710 0.41 +2.4 710,916 + +1.0 710,929 + +3.0 710,929 + +2.6
Or see this region's nucleotide sequence