Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0611

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0610 and B158DRAFT_0611 overlap by 4 nucleotidesB158DRAFT_0611 and B158DRAFT_0612 are separated by 295 nucleotides B158DRAFT_0610: B158DRAFT_0610 - 5-(carboxyamino)imidazole ribonucleotide synthase, at 616,784 to 617,935 _0610 B158DRAFT_0611: B158DRAFT_0611 - 5-(carboxyamino)imidazole ribonucleotide mutase, at 617,932 to 618,417 _0611 B158DRAFT_0612: B158DRAFT_0612 - putative oligopeptide transporter, OPT family, at 618,713 to 620,707 _0612 Position (kb) 617 618 619Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 618.631 kb on - strandat 618.687 kb on + strandat 618.754 kb on - strandat 618.774 kb on + strandat 618.774 kb on + strandat 618.774 kb on + strandat 618.774 kb on + strandat 618.782 kb on - strandat 618.869 kb on + strandat 618.891 kb on + strandat 618.891 kb on + strandat 618.896 kb on + strandat 618.899 kb on - strandat 618.899 kb on - strandat 618.899 kb on - strandat 618.904 kb on - strandat 618.953 kb on + strand, within B158DRAFT_0612at 619.033 kb on + strand, within B158DRAFT_0612at 619.033 kb on + strand, within B158DRAFT_0612at 619.041 kb on - strand, within B158DRAFT_0612at 619.046 kb on + strand, within B158DRAFT_0612at 619.054 kb on - strand, within B158DRAFT_0612at 619.054 kb on - strand, within B158DRAFT_0612at 619.064 kb on + strand, within B158DRAFT_0612at 619.072 kb on - strand, within B158DRAFT_0612at 619.088 kb on + strand, within B158DRAFT_0612at 619.119 kb on + strand, within B158DRAFT_0612at 619.141 kb on + strand, within B158DRAFT_0612at 619.142 kb on - strand, within B158DRAFT_0612at 619.156 kb on + strand, within B158DRAFT_0612at 619.192 kb on + strand, within B158DRAFT_0612at 619.192 kb on + strand, within B158DRAFT_0612at 619.192 kb on + strand, within B158DRAFT_0612at 619.192 kb on + strand, within B158DRAFT_0612at 619.192 kb on + strand, within B158DRAFT_0612at 619.200 kb on - strand, within B158DRAFT_0612at 619.200 kb on - strand, within B158DRAFT_0612at 619.200 kb on - strand, within B158DRAFT_0612at 619.200 kb on - strand, within B158DRAFT_0612at 619.204 kb on + strand, within B158DRAFT_0612at 619.205 kb on - strand, within B158DRAFT_0612at 619.223 kb on - strand, within B158DRAFT_0612at 619.385 kb on - strand, within B158DRAFT_0612at 619.408 kb on + strand, within B158DRAFT_0612at 619.416 kb on - strand, within B158DRAFT_0612

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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618,631 - -0.9
618,687 + +0.9
618,754 - +1.2
618,774 + +0.2
618,774 + +1.2
618,774 + -0.0
618,774 + +0.0
618,782 - -0.5
618,869 + -2.2
618,891 + -1.0
618,891 + +1.0
618,896 + -0.5
618,899 - -1.6
618,899 - +0.5
618,899 - -0.5
618,904 - +1.3
618,953 + B158DRAFT_0612 0.12 +0.5
619,033 + B158DRAFT_0612 0.16 -0.6
619,033 + B158DRAFT_0612 0.16 -0.9
619,041 - B158DRAFT_0612 0.16 +1.8
619,046 + B158DRAFT_0612 0.17 -2.8
619,054 - B158DRAFT_0612 0.17 +1.2
619,054 - B158DRAFT_0612 0.17 -1.1
619,064 + B158DRAFT_0612 0.18 +1.0
619,072 - B158DRAFT_0612 0.18 +2.3
619,088 + B158DRAFT_0612 0.19 -0.0
619,119 + B158DRAFT_0612 0.20 -0.5
619,141 + B158DRAFT_0612 0.21 -1.3
619,142 - B158DRAFT_0612 0.22 -0.2
619,156 + B158DRAFT_0612 0.22 -1.7
619,192 + B158DRAFT_0612 0.24 -0.4
619,192 + B158DRAFT_0612 0.24 -0.2
619,192 + B158DRAFT_0612 0.24 +0.1
619,192 + B158DRAFT_0612 0.24 -1.0
619,192 + B158DRAFT_0612 0.24 -0.4
619,200 - B158DRAFT_0612 0.24 +1.3
619,200 - B158DRAFT_0612 0.24 +1.8
619,200 - B158DRAFT_0612 0.24 -0.7
619,200 - B158DRAFT_0612 0.24 -1.2
619,204 + B158DRAFT_0612 0.25 -0.9
619,205 - B158DRAFT_0612 0.25 -1.0
619,223 - B158DRAFT_0612 0.26 -0.8
619,385 - B158DRAFT_0612 0.34 +0.9
619,408 + B158DRAFT_0612 0.35 -1.5
619,416 - B158DRAFT_0612 0.35 -0.5

Or see this region's nucleotide sequence