Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0601

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0600 and B158DRAFT_0601 are separated by 32 nucleotidesB158DRAFT_0601 and B158DRAFT_0602 are separated by 41 nucleotides B158DRAFT_0600: B158DRAFT_0600 - hypothetical protein, at 604,390 to 605,163 _0600 B158DRAFT_0601: B158DRAFT_0601 - DNA replication and repair protein RecN, at 605,196 to 606,854 _0601 B158DRAFT_0602: B158DRAFT_0602 - Predicted sugar kinase, at 606,896 to 607,771 _0602 Position (kb) 605 606 607Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 604.211 kb on - strandat 604.361 kb on + strandat 604.369 kb on - strandat 604.369 kb on - strandat 604.500 kb on - strand, within B158DRAFT_0600at 604.572 kb on + strand, within B158DRAFT_0600at 604.572 kb on + strand, within B158DRAFT_0600at 604.580 kb on - strand, within B158DRAFT_0600at 604.580 kb on - strand, within B158DRAFT_0600at 604.620 kb on - strand, within B158DRAFT_0600at 604.635 kb on - strand, within B158DRAFT_0600at 604.738 kb on + strand, within B158DRAFT_0600at 604.770 kb on - strand, within B158DRAFT_0600at 604.937 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.958 kb on + strand, within B158DRAFT_0600at 604.958 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.966 kb on - strand, within B158DRAFT_0600at 605.004 kb on + strand, within B158DRAFT_0600at 605.120 kb on - strandat 605.132 kb on + strandat 605.132 kb on + strandat 605.132 kb on + strandat 605.132 kb on + strandat 605.132 kb on + strandat 605.158 kb on - strandat 605.236 kb on - strandat 605.291 kb on - strandat 605.346 kb on + strandat 605.364 kb on + strand, within B158DRAFT_0601at 605.382 kb on + strand, within B158DRAFT_0601at 605.465 kb on - strand, within B158DRAFT_0601at 605.482 kb on - strand, within B158DRAFT_0601at 605.529 kb on - strand, within B158DRAFT_0601at 605.572 kb on + strand, within B158DRAFT_0601at 605.603 kb on + strand, within B158DRAFT_0601at 605.603 kb on + strand, within B158DRAFT_0601at 605.611 kb on - strand, within B158DRAFT_0601at 605.700 kb on - strand, within B158DRAFT_0601at 605.741 kb on + strand, within B158DRAFT_0601at 605.762 kb on - strand, within B158DRAFT_0601at 605.786 kb on + strand, within B158DRAFT_0601at 605.811 kb on + strand, within B158DRAFT_0601at 605.882 kb on + strand, within B158DRAFT_0601at 605.882 kb on + strand, within B158DRAFT_0601at 605.882 kb on + strand, within B158DRAFT_0601at 605.890 kb on - strand, within B158DRAFT_0601at 605.890 kb on - strand, within B158DRAFT_0601at 605.908 kb on + strand, within B158DRAFT_0601at 605.913 kb on + strand, within B158DRAFT_0601at 605.921 kb on - strand, within B158DRAFT_0601at 605.944 kb on + strand, within B158DRAFT_0601at 605.945 kb on - strand, within B158DRAFT_0601at 605.971 kb on - strand, within B158DRAFT_0601at 605.980 kb on + strand, within B158DRAFT_0601at 606.022 kb on - strand, within B158DRAFT_0601at 606.022 kb on - strand, within B158DRAFT_0601at 606.033 kb on + strand, within B158DRAFT_0601at 606.113 kb on - strand, within B158DRAFT_0601at 606.182 kb on - strand, within B158DRAFT_0601at 606.258 kb on - strand, within B158DRAFT_0601at 606.275 kb on + strand, within B158DRAFT_0601at 606.283 kb on - strand, within B158DRAFT_0601at 606.283 kb on - strand, within B158DRAFT_0601at 606.285 kb on + strand, within B158DRAFT_0601at 606.293 kb on - strand, within B158DRAFT_0601at 606.293 kb on - strand, within B158DRAFT_0601at 606.339 kb on - strand, within B158DRAFT_0601at 606.370 kb on + strand, within B158DRAFT_0601at 606.378 kb on - strand, within B158DRAFT_0601at 606.378 kb on - strand, within B158DRAFT_0601at 606.380 kb on + strand, within B158DRAFT_0601at 606.409 kb on - strand, within B158DRAFT_0601at 606.416 kb on - strand, within B158DRAFT_0601at 606.430 kb on - strand, within B158DRAFT_0601at 606.450 kb on + strand, within B158DRAFT_0601at 606.458 kb on - strand, within B158DRAFT_0601at 606.458 kb on - strand, within B158DRAFT_0601at 606.549 kb on - strand, within B158DRAFT_0601at 606.571 kb on - strand, within B158DRAFT_0601at 606.592 kb on + strand, within B158DRAFT_0601at 606.619 kb on - strand, within B158DRAFT_0601at 606.721 kb on + strandat 606.721 kb on + strandat 606.721 kb on + strandat 606.721 kb on + strandat 606.721 kb on + strandat 606.726 kb on + strandat 606.729 kb on - strandat 606.729 kb on - strandat 606.839 kb on + strandat 606.839 kb on + strandat 606.846 kb on + strandat 606.854 kb on - strandat 606.854 kb on - strandat 606.854 kb on - strandat 606.854 kb on - strandat 606.901 kb on + strandat 606.902 kb on - strandat 606.902 kb on - strandat 606.909 kb on - strandat 607.836 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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604,211 - +1.4
604,361 + -0.5
604,369 - -0.7
604,369 - +0.6
604,500 - B158DRAFT_0600 0.14 -0.5
604,572 + B158DRAFT_0600 0.24 +0.2
604,572 + B158DRAFT_0600 0.24 +0.9
604,580 - B158DRAFT_0600 0.25 +0.2
604,580 - B158DRAFT_0600 0.25 +0.5
604,620 - B158DRAFT_0600 0.30 -0.4
604,635 - B158DRAFT_0600 0.32 +0.6
604,738 + B158DRAFT_0600 0.45 -0.4
604,770 - B158DRAFT_0600 0.49 -1.5
604,937 + B158DRAFT_0600 0.71 -0.1
604,956 + B158DRAFT_0600 0.73 -1.2
604,956 + B158DRAFT_0600 0.73 +1.4
604,956 + B158DRAFT_0600 0.73 -1.9
604,956 + B158DRAFT_0600 0.73 -1.0
604,956 + B158DRAFT_0600 0.73 -1.3
604,956 + B158DRAFT_0600 0.73 +0.8
604,956 + B158DRAFT_0600 0.73 -0.4
604,956 + B158DRAFT_0600 0.73 +0.7
604,956 + B158DRAFT_0600 0.73 -1.0
604,958 + B158DRAFT_0600 0.73 -1.0
604,958 - B158DRAFT_0600 0.73 +1.2
604,964 - B158DRAFT_0600 0.74 +1.7
604,964 - B158DRAFT_0600 0.74 -1.8
604,964 - B158DRAFT_0600 0.74 -3.2
604,964 - B158DRAFT_0600 0.74 +1.2
604,964 - B158DRAFT_0600 0.74 -0.3
604,964 - B158DRAFT_0600 0.74 -0.8
604,964 - B158DRAFT_0600 0.74 -0.9
604,964 - B158DRAFT_0600 0.74 -0.8
604,964 - B158DRAFT_0600 0.74 -1.5
604,964 - B158DRAFT_0600 0.74 -2.8
604,966 - B158DRAFT_0600 0.74 -1.3
605,004 + B158DRAFT_0600 0.79 -1.2
605,120 - -0.5
605,132 + -0.5
605,132 + -2.0
605,132 + -2.1
605,132 + +0.5
605,132 + -2.5
605,158 - +0.8
605,236 - +1.7
605,291 - +0.1
605,346 + +2.9
605,364 + B158DRAFT_0601 0.10 -1.7
605,382 + B158DRAFT_0601 0.11 -0.1
605,465 - B158DRAFT_0601 0.16 +1.9
605,482 - B158DRAFT_0601 0.17 -0.9
605,529 - B158DRAFT_0601 0.20 +0.5
605,572 + B158DRAFT_0601 0.23 +0.3
605,603 + B158DRAFT_0601 0.25 -0.9
605,603 + B158DRAFT_0601 0.25 +0.4
605,611 - B158DRAFT_0601 0.25 -0.1
605,700 - B158DRAFT_0601 0.30 +1.8
605,741 + B158DRAFT_0601 0.33 +0.5
605,762 - B158DRAFT_0601 0.34 +2.5
605,786 + B158DRAFT_0601 0.36 +2.0
605,811 + B158DRAFT_0601 0.37 +0.9
605,882 + B158DRAFT_0601 0.41 +0.4
605,882 + B158DRAFT_0601 0.41 -0.1
605,882 + B158DRAFT_0601 0.41 +1.5
605,890 - B158DRAFT_0601 0.42 +1.2
605,890 - B158DRAFT_0601 0.42 +0.8
605,908 + B158DRAFT_0601 0.43 +0.5
605,913 + B158DRAFT_0601 0.43 -0.6
605,921 - B158DRAFT_0601 0.44 -1.6
605,944 + B158DRAFT_0601 0.45 -0.7
605,945 - B158DRAFT_0601 0.45 +2.3
605,971 - B158DRAFT_0601 0.47 +0.2
605,980 + B158DRAFT_0601 0.47 -0.5
606,022 - B158DRAFT_0601 0.50 +0.1
606,022 - B158DRAFT_0601 0.50 -1.7
606,033 + B158DRAFT_0601 0.50 -0.3
606,113 - B158DRAFT_0601 0.55 -0.5
606,182 - B158DRAFT_0601 0.59 -0.5
606,258 - B158DRAFT_0601 0.64 -0.8
606,275 + B158DRAFT_0601 0.65 -0.8
606,283 - B158DRAFT_0601 0.66 -0.3
606,283 - B158DRAFT_0601 0.66 -0.9
606,285 + B158DRAFT_0601 0.66 +0.7
606,293 - B158DRAFT_0601 0.66 -0.4
606,293 - B158DRAFT_0601 0.66 +0.7
606,339 - B158DRAFT_0601 0.69 -0.9
606,370 + B158DRAFT_0601 0.71 +0.3
606,378 - B158DRAFT_0601 0.71 +1.1
606,378 - B158DRAFT_0601 0.71 +0.4
606,380 + B158DRAFT_0601 0.71 +1.1
606,409 - B158DRAFT_0601 0.73 -0.6
606,416 - B158DRAFT_0601 0.74 +1.7
606,430 - B158DRAFT_0601 0.74 -0.2
606,450 + B158DRAFT_0601 0.76 -0.1
606,458 - B158DRAFT_0601 0.76 -0.4
606,458 - B158DRAFT_0601 0.76 +1.8
606,549 - B158DRAFT_0601 0.82 +1.4
606,571 - B158DRAFT_0601 0.83 -0.2
606,592 + B158DRAFT_0601 0.84 +0.5
606,619 - B158DRAFT_0601 0.86 +0.6
606,721 + -0.5
606,721 + -0.1
606,721 + -0.1
606,721 + +2.1
606,721 + -0.2
606,726 + +0.4
606,729 - -0.3
606,729 - -0.7
606,839 + +0.5
606,839 + -1.8
606,846 + +1.2
606,854 - -0.0
606,854 - +0.4
606,854 - -1.5
606,854 - +0.2
606,901 + -1.4
606,902 - +0.1
606,902 - +1.3
606,909 - -2.1
607,836 + -1.3

Or see this region's nucleotide sequence