Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0486 and B158DRAFT_0487 are separated by 37 nucleotides B158DRAFT_0487 and B158DRAFT_0488 are separated by 74 nucleotides B158DRAFT_0488 and B158DRAFT_0489 are separated by 60 nucleotides
B158DRAFT_0486: B158DRAFT_0486 - iron-sulfur cluster binding protein, putative, at 486,608 to 487,756
_0486
B158DRAFT_0487: B158DRAFT_0487 - Cytochrome c5, at 487,794 to 488,108
_0487
B158DRAFT_0488: B158DRAFT_0488 - Cytochrome c5, at 488,183 to 488,623
_0488
B158DRAFT_0489: B158DRAFT_0489 - uncharacterized domain 1, at 488,684 to 489,307
_0489
Position (kb) 487
488
489 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 486.855 kb on + strand, within B158DRAFT_0486 at 486.889 kb on - strand, within B158DRAFT_0486 at 486.889 kb on - strand, within B158DRAFT_0486 at 486.897 kb on - strand, within B158DRAFT_0486 at 486.902 kb on - strand, within B158DRAFT_0486 at 486.926 kb on - strand, within B158DRAFT_0486 at 486.926 kb on - strand, within B158DRAFT_0486 at 486.984 kb on + strand, within B158DRAFT_0486 at 487.044 kb on - strand, within B158DRAFT_0486 at 487.141 kb on + strand, within B158DRAFT_0486 at 487.141 kb on + strand, within B158DRAFT_0486 at 487.149 kb on - strand, within B158DRAFT_0486 at 487.173 kb on + strand, within B158DRAFT_0486 at 487.181 kb on - strand, within B158DRAFT_0486 at 487.265 kb on + strand, within B158DRAFT_0486 at 487.285 kb on + strand, within B158DRAFT_0486 at 487.376 kb on + strand, within B158DRAFT_0486 at 487.433 kb on + strand, within B158DRAFT_0486 at 487.541 kb on - strand, within B158DRAFT_0486 at 487.618 kb on + strand, within B158DRAFT_0486 at 487.630 kb on + strand, within B158DRAFT_0486 at 487.647 kb on - strand at 487.672 kb on - strand at 487.680 kb on - strand at 487.769 kb on + strand at 487.818 kb on + strand at 487.818 kb on + strand at 487.818 kb on + strand at 487.820 kb on - strand at 487.826 kb on - strand, within B158DRAFT_0487 at 487.864 kb on + strand, within B158DRAFT_0487 at 487.864 kb on + strand, within B158DRAFT_0487 at 487.864 kb on + strand, within B158DRAFT_0487 at 487.872 kb on - strand, within B158DRAFT_0487 at 487.872 kb on - strand, within B158DRAFT_0487 at 487.872 kb on - strand, within B158DRAFT_0487 at 487.887 kb on - strand, within B158DRAFT_0487 at 487.929 kb on - strand, within B158DRAFT_0487 at 487.954 kb on - strand, within B158DRAFT_0487 at 487.970 kb on - strand, within B158DRAFT_0487 at 487.970 kb on - strand, within B158DRAFT_0487 at 488.032 kb on - strand, within B158DRAFT_0487 at 488.042 kb on + strand, within B158DRAFT_0487 at 488.042 kb on + strand, within B158DRAFT_0487 at 488.050 kb on - strand, within B158DRAFT_0487 at 488.096 kb on - strand at 488.168 kb on + strand at 488.173 kb on + strand at 488.239 kb on + strand, within B158DRAFT_0488 at 488.243 kb on - strand, within B158DRAFT_0488 at 488.299 kb on - strand, within B158DRAFT_0488 at 488.312 kb on - strand, within B158DRAFT_0488 at 488.322 kb on + strand, within B158DRAFT_0488 at 488.322 kb on + strand, within B158DRAFT_0488 at 488.397 kb on + strand, within B158DRAFT_0488 at 488.410 kb on + strand, within B158DRAFT_0488 at 488.410 kb on + strand, within B158DRAFT_0488 at 488.418 kb on - strand, within B158DRAFT_0488 at 488.418 kb on - strand, within B158DRAFT_0488 at 488.508 kb on + strand, within B158DRAFT_0488 at 488.516 kb on - strand, within B158DRAFT_0488 at 488.516 kb on - strand, within B158DRAFT_0488 at 488.516 kb on - strand, within B158DRAFT_0488 at 488.545 kb on + strand, within B158DRAFT_0488 at 488.619 kb on + strand at 488.637 kb on + strand at 488.637 kb on + strand at 488.637 kb on + strand at 488.637 kb on + strand at 488.637 kb on + strand at 488.645 kb on - strand at 488.645 kb on - strand at 488.645 kb on - strand at 488.645 kb on - strand at 488.645 kb on - strand at 488.645 kb on - strand at 488.645 kb on - strand at 488.652 kb on - strand at 488.654 kb on + strand at 488.692 kb on + strand at 488.700 kb on - strand at 488.814 kb on - strand, within B158DRAFT_0489 at 488.836 kb on - strand, within B158DRAFT_0489 at 488.916 kb on + strand, within B158DRAFT_0489 at 489.038 kb on + strand, within B158DRAFT_0489 at 489.038 kb on + strand, within B158DRAFT_0489 at 489.038 kb on + strand, within B158DRAFT_0489
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 486,855 + B158DRAFT_0486 0.21 -2.2 486,889 - B158DRAFT_0486 0.24 -1.1 486,889 - B158DRAFT_0486 0.24 -0.7 486,897 - B158DRAFT_0486 0.25 +0.7 486,902 - B158DRAFT_0486 0.26 +1.2 486,926 - B158DRAFT_0486 0.28 -0.1 486,926 - B158DRAFT_0486 0.28 +1.9 486,984 + B158DRAFT_0486 0.33 -1.1 487,044 - B158DRAFT_0486 0.38 -1.1 487,141 + B158DRAFT_0486 0.46 -1.5 487,141 + B158DRAFT_0486 0.46 -1.2 487,149 - B158DRAFT_0486 0.47 +0.1 487,173 + B158DRAFT_0486 0.49 -0.9 487,181 - B158DRAFT_0486 0.50 -1.6 487,265 + B158DRAFT_0486 0.57 -0.1 487,285 + B158DRAFT_0486 0.59 +0.5 487,376 + B158DRAFT_0486 0.67 -1.5 487,433 + B158DRAFT_0486 0.72 -2.0 487,541 - B158DRAFT_0486 0.81 -0.1 487,618 + B158DRAFT_0486 0.88 -0.4 487,630 + B158DRAFT_0486 0.89 -1.1 487,647 - -1.0 487,672 - -0.1 487,680 - -1.1 487,769 + -0.6 487,818 + +0.4 487,818 + -1.0 487,818 + -0.4 487,820 - +0.4 487,826 - B158DRAFT_0487 0.10 +0.0 487,864 + B158DRAFT_0487 0.22 -0.5 487,864 + B158DRAFT_0487 0.22 +0.9 487,864 + B158DRAFT_0487 0.22 +1.6 487,872 - B158DRAFT_0487 0.25 -0.6 487,872 - B158DRAFT_0487 0.25 -0.6 487,872 - B158DRAFT_0487 0.25 +0.6 487,887 - B158DRAFT_0487 0.30 -0.3 487,929 - B158DRAFT_0487 0.43 -0.0 487,954 - B158DRAFT_0487 0.51 -0.6 487,970 - B158DRAFT_0487 0.56 +0.5 487,970 - B158DRAFT_0487 0.56 +0.7 488,032 - B158DRAFT_0487 0.76 +0.9 488,042 + B158DRAFT_0487 0.79 +1.1 488,042 + B158DRAFT_0487 0.79 +1.4 488,050 - B158DRAFT_0487 0.81 +1.3 488,096 - -0.9 488,168 + +0.2 488,173 + +1.6 488,239 + B158DRAFT_0488 0.13 +2.2 488,243 - B158DRAFT_0488 0.14 +1.4 488,299 - B158DRAFT_0488 0.26 +1.4 488,312 - B158DRAFT_0488 0.29 +1.2 488,322 + B158DRAFT_0488 0.32 +1.3 488,322 + B158DRAFT_0488 0.32 +2.7 488,397 + B158DRAFT_0488 0.49 +2.5 488,410 + B158DRAFT_0488 0.51 +1.9 488,410 + B158DRAFT_0488 0.51 +1.0 488,418 - B158DRAFT_0488 0.53 +1.1 488,418 - B158DRAFT_0488 0.53 +1.4 488,508 + B158DRAFT_0488 0.74 +3.6 488,516 - B158DRAFT_0488 0.76 +1.9 488,516 - B158DRAFT_0488 0.76 +1.5 488,516 - B158DRAFT_0488 0.76 +1.5 488,545 + B158DRAFT_0488 0.82 +1.8 488,619 + +1.6 488,637 + +1.6 488,637 + +2.3 488,637 + +1.4 488,637 + +2.5 488,637 + +1.8 488,645 - +0.3 488,645 - +1.5 488,645 - +0.2 488,645 - -0.6 488,645 - -0.1 488,645 - -0.1 488,645 - +0.8 488,652 - +0.2 488,654 + +1.4 488,692 + -0.0 488,700 - -2.2 488,814 - B158DRAFT_0489 0.21 -0.6 488,836 - B158DRAFT_0489 0.24 +1.6 488,916 + B158DRAFT_0489 0.37 -1.0 489,038 + B158DRAFT_0489 0.57 -1.2 489,038 + B158DRAFT_0489 0.57 -0.7 489,038 + B158DRAFT_0489 0.57 -2.0
Or see this region's nucleotide sequence