Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0250 and B158DRAFT_0251 are separated by 6 nucleotides B158DRAFT_0251 and B158DRAFT_0252 are separated by 74 nucleotides B158DRAFT_0252 and B158DRAFT_0253 are separated by 16 nucleotides B158DRAFT_0253 and B158DRAFT_0254 are separated by 102 nucleotides
B158DRAFT_0250: B158DRAFT_0250 - Predicted signal transduction protein with a C-terminal ATPase domain, at 256,270 to 257,307
_0250
B158DRAFT_0251: B158DRAFT_0251 - two component transcriptional regulator, LytTR family, at 257,314 to 258,018
_0251
B158DRAFT_0252: B158DRAFT_0252 - hydroxymethylbilane synthase (EC 2.5.1.61), at 258,093 to 259,028
_0252
B158DRAFT_0253: B158DRAFT_0253 - Uroporphyrinogen-III synthase, at 259,045 to 259,797
_0253
B158DRAFT_0254: B158DRAFT_0254 - Uncharacterized enzyme of heme biosynthesis, at 259,900 to 261,183
_0254
Position (kb) 258
259
260 Strain fitness (log2 ratio) -2
-1
0
1
2 at 257.094 kb on + strand, within B158DRAFT_0250 at 257.136 kb on + strand, within B158DRAFT_0250 at 257.136 kb on + strand, within B158DRAFT_0250 at 257.177 kb on - strand, within B158DRAFT_0250 at 257.183 kb on - strand, within B158DRAFT_0250 at 257.210 kb on + strand at 257.229 kb on - strand at 257.340 kb on + strand at 257.384 kb on + strand at 257.397 kb on - strand, within B158DRAFT_0251 at 257.412 kb on + strand, within B158DRAFT_0251 at 257.427 kb on - strand, within B158DRAFT_0251 at 257.444 kb on + strand, within B158DRAFT_0251 at 257.466 kb on - strand, within B158DRAFT_0251 at 257.542 kb on + strand, within B158DRAFT_0251 at 257.542 kb on + strand, within B158DRAFT_0251 at 257.640 kb on + strand, within B158DRAFT_0251 at 257.677 kb on + strand, within B158DRAFT_0251 at 257.687 kb on + strand, within B158DRAFT_0251 at 257.805 kb on - strand, within B158DRAFT_0251 at 257.867 kb on + strand, within B158DRAFT_0251 at 257.875 kb on - strand, within B158DRAFT_0251 at 257.875 kb on - strand, within B158DRAFT_0251 at 257.875 kb on - strand, within B158DRAFT_0251 at 257.875 kb on - strand, within B158DRAFT_0251 at 257.875 kb on - strand, within B158DRAFT_0251 at 257.885 kb on - strand, within B158DRAFT_0251 at 257.898 kb on - strand, within B158DRAFT_0251 at 257.908 kb on - strand, within B158DRAFT_0251 at 259.022 kb on + strand at 259.911 kb on + strand at 259.919 kb on - strand at 259.919 kb on - strand at 260.010 kb on + strand at 260.015 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 257,094 + B158DRAFT_0250 0.79 +0.3 257,136 + B158DRAFT_0250 0.83 +0.2 257,136 + B158DRAFT_0250 0.83 -1.3 257,177 - B158DRAFT_0250 0.87 -0.6 257,183 - B158DRAFT_0250 0.88 +0.2 257,210 + -0.3 257,229 - -0.5 257,340 + -0.4 257,384 + -2.2 257,397 - B158DRAFT_0251 0.12 -1.5 257,412 + B158DRAFT_0251 0.14 -0.3 257,427 - B158DRAFT_0251 0.16 -0.4 257,444 + B158DRAFT_0251 0.18 -1.2 257,466 - B158DRAFT_0251 0.22 +0.5 257,542 + B158DRAFT_0251 0.32 -1.0 257,542 + B158DRAFT_0251 0.32 +2.6 257,640 + B158DRAFT_0251 0.46 +1.2 257,677 + B158DRAFT_0251 0.51 -0.7 257,687 + B158DRAFT_0251 0.53 +0.7 257,805 - B158DRAFT_0251 0.70 -1.5 257,867 + B158DRAFT_0251 0.78 +0.1 257,875 - B158DRAFT_0251 0.80 -0.7 257,875 - B158DRAFT_0251 0.80 -1.2 257,875 - B158DRAFT_0251 0.80 -0.9 257,875 - B158DRAFT_0251 0.80 +0.4 257,875 - B158DRAFT_0251 0.80 +0.2 257,885 - B158DRAFT_0251 0.81 +2.1 257,898 - B158DRAFT_0251 0.83 -1.9 257,908 - B158DRAFT_0251 0.84 -0.4 259,022 + -0.6 259,911 + -1.2 259,919 - +1.0 259,919 - +2.2 260,010 + -0.6 260,015 + +2.2
Or see this region's nucleotide sequence