Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0236

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0235 and B158DRAFT_0236 are separated by 555 nucleotidesB158DRAFT_0236 and B158DRAFT_0237 are separated by 430 nucleotides B158DRAFT_0235: B158DRAFT_0235 - FOG: PKD repeat, at 241,514 to 242,306 _0235 B158DRAFT_0236: B158DRAFT_0236 - Subtilisin-like serine proteases, at 242,862 to 243,499 _0236 B158DRAFT_0237: B158DRAFT_0237 - Subtilisin-like serine proteases, at 243,930 to 246,230 _0237 Position (kb) 242 243 244Strain fitness (log2 ratio) -2 -1 0 1 2 3at 241.918 kb on - strand, within B158DRAFT_0235at 241.918 kb on - strand, within B158DRAFT_0235at 241.918 kb on - strand, within B158DRAFT_0235at 241.926 kb on - strand, within B158DRAFT_0235at 241.928 kb on + strand, within B158DRAFT_0235at 241.936 kb on - strand, within B158DRAFT_0235at 241.966 kb on + strand, within B158DRAFT_0235at 241.966 kb on + strand, within B158DRAFT_0235at 241.966 kb on + strand, within B158DRAFT_0235at 241.966 kb on + strand, within B158DRAFT_0235at 241.966 kb on + strand, within B158DRAFT_0235at 241.966 kb on + strand, within B158DRAFT_0235at 241.966 kb on + strand, within B158DRAFT_0235at 241.974 kb on - strand, within B158DRAFT_0235at 241.974 kb on - strand, within B158DRAFT_0235at 241.974 kb on - strand, within B158DRAFT_0235at 241.974 kb on - strand, within B158DRAFT_0235at 241.974 kb on - strand, within B158DRAFT_0235at 242.134 kb on + strand, within B158DRAFT_0235at 242.176 kb on + strand, within B158DRAFT_0235at 242.186 kb on + strand, within B158DRAFT_0235at 242.186 kb on + strand, within B158DRAFT_0235at 242.194 kb on - strand, within B158DRAFT_0235at 242.957 kb on + strand, within B158DRAFT_0236at 242.989 kb on - strand, within B158DRAFT_0236at 243.084 kb on - strand, within B158DRAFT_0236at 243.111 kb on + strand, within B158DRAFT_0236at 243.111 kb on + strand, within B158DRAFT_0236at 243.186 kb on + strand, within B158DRAFT_0236at 243.186 kb on + strand, within B158DRAFT_0236at 243.194 kb on - strand, within B158DRAFT_0236at 243.293 kb on + strand, within B158DRAFT_0236at 243.340 kb on + strand, within B158DRAFT_0236at 243.350 kb on + strand, within B158DRAFT_0236at 243.364 kb on - strand, within B158DRAFT_0236at 243.377 kb on - strand, within B158DRAFT_0236at 243.403 kb on - strand, within B158DRAFT_0236at 243.403 kb on - strand, within B158DRAFT_0236at 243.403 kb on - strand, within B158DRAFT_0236at 243.403 kb on - strand, within B158DRAFT_0236at 243.403 kb on - strand, within B158DRAFT_0236at 243.403 kb on - strand, within B158DRAFT_0236at 243.403 kb on - strand, within B158DRAFT_0236at 243.450 kb on - strandat 243.613 kb on - strandat 243.614 kb on + strandat 243.624 kb on + strandat 243.624 kb on + strandat 243.632 kb on - strandat 243.632 kb on - strandat 243.853 kb on + strandat 243.860 kb on + strandat 243.950 kb on + strandat 243.956 kb on + strandat 243.956 kb on + strandat 243.956 kb on + strandat 243.964 kb on - strandat 243.964 kb on - strandat 243.964 kb on - strandat 243.969 kb on + strandat 243.978 kb on + strandat 244.005 kb on - strandat 244.005 kb on - strandat 244.069 kb on + strandat 244.071 kb on + strandat 244.081 kb on + strandat 244.084 kb on - strandat 244.095 kb on + strandat 244.095 kb on + strandat 244.103 kb on - strandat 244.125 kb on + strandat 244.156 kb on + strandat 244.160 kb on + strand, within B158DRAFT_0237at 244.185 kb on + strand, within B158DRAFT_0237at 244.188 kb on - strand, within B158DRAFT_0237at 244.193 kb on - strand, within B158DRAFT_0237at 244.210 kb on - strand, within B158DRAFT_0237at 244.212 kb on + strand, within B158DRAFT_0237at 244.232 kb on + strand, within B158DRAFT_0237at 244.240 kb on - strand, within B158DRAFT_0237at 244.265 kb on + strand, within B158DRAFT_0237at 244.312 kb on + strand, within B158DRAFT_0237at 244.312 kb on + strand, within B158DRAFT_0237at 244.320 kb on - strand, within B158DRAFT_0237at 244.320 kb on - strand, within B158DRAFT_0237at 244.320 kb on - strand, within B158DRAFT_0237at 244.350 kb on + strand, within B158DRAFT_0237at 244.374 kb on + strand, within B158DRAFT_0237at 244.389 kb on + strand, within B158DRAFT_0237at 244.389 kb on + strand, within B158DRAFT_0237at 244.397 kb on - strand, within B158DRAFT_0237at 244.400 kb on + strand, within B158DRAFT_0237at 244.414 kb on - strand, within B158DRAFT_0237at 244.418 kb on + strand, within B158DRAFT_0237at 244.418 kb on + strand, within B158DRAFT_0237at 244.465 kb on + strand, within B158DRAFT_0237at 244.478 kb on + strand, within B158DRAFT_0237at 244.478 kb on + strand, within B158DRAFT_0237at 244.478 kb on - strand, within B158DRAFT_0237

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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241,918 - B158DRAFT_0235 0.51 -0.3
241,918 - B158DRAFT_0235 0.51 -0.7
241,918 - B158DRAFT_0235 0.51 -0.6
241,926 - B158DRAFT_0235 0.52 +0.7
241,928 + B158DRAFT_0235 0.52 -0.2
241,936 - B158DRAFT_0235 0.53 -0.3
241,966 + B158DRAFT_0235 0.57 +0.1
241,966 + B158DRAFT_0235 0.57 +0.4
241,966 + B158DRAFT_0235 0.57 -1.6
241,966 + B158DRAFT_0235 0.57 -1.5
241,966 + B158DRAFT_0235 0.57 -0.9
241,966 + B158DRAFT_0235 0.57 -1.9
241,966 + B158DRAFT_0235 0.57 +0.4
241,974 - B158DRAFT_0235 0.58 +3.3
241,974 - B158DRAFT_0235 0.58 -0.4
241,974 - B158DRAFT_0235 0.58 -1.7
241,974 - B158DRAFT_0235 0.58 -0.4
241,974 - B158DRAFT_0235 0.58 +0.2
242,134 + B158DRAFT_0235 0.78 +2.6
242,176 + B158DRAFT_0235 0.83 -1.7
242,186 + B158DRAFT_0235 0.85 -2.2
242,186 + B158DRAFT_0235 0.85 +1.9
242,194 - B158DRAFT_0235 0.86 -0.8
242,957 + B158DRAFT_0236 0.15 -0.6
242,989 - B158DRAFT_0236 0.20 +0.4
243,084 - B158DRAFT_0236 0.35 +1.2
243,111 + B158DRAFT_0236 0.39 -0.9
243,111 + B158DRAFT_0236 0.39 +1.7
243,186 + B158DRAFT_0236 0.51 -2.2
243,186 + B158DRAFT_0236 0.51 -0.6
243,194 - B158DRAFT_0236 0.52 +0.8
243,293 + B158DRAFT_0236 0.68 +0.4
243,340 + B158DRAFT_0236 0.75 +0.7
243,350 + B158DRAFT_0236 0.76 +0.1
243,364 - B158DRAFT_0236 0.79 -1.0
243,377 - B158DRAFT_0236 0.81 -0.9
243,403 - B158DRAFT_0236 0.85 +3.1
243,403 - B158DRAFT_0236 0.85 -1.4
243,403 - B158DRAFT_0236 0.85 -1.8
243,403 - B158DRAFT_0236 0.85 -0.8
243,403 - B158DRAFT_0236 0.85 -0.5
243,403 - B158DRAFT_0236 0.85 -0.5
243,403 - B158DRAFT_0236 0.85 -0.1
243,450 - -0.1
243,613 - -0.6
243,614 + -1.1
243,624 + -0.6
243,624 + -2.5
243,632 - -0.8
243,632 - -0.8
243,853 + -0.3
243,860 + +0.1
243,950 + -0.6
243,956 + +0.0
243,956 + -1.3
243,956 + +1.5
243,964 - -0.0
243,964 - -2.3
243,964 - -0.7
243,969 + -0.1
243,978 + +1.1
244,005 - +1.6
244,005 - -0.6
244,069 + +0.7
244,071 + +0.1
244,081 + -1.4
244,084 - -0.0
244,095 + -0.3
244,095 + -1.2
244,103 - -0.5
244,125 + +2.0
244,156 + -1.6
244,160 + B158DRAFT_0237 0.10 -0.3
244,185 + B158DRAFT_0237 0.11 +0.2
244,188 - B158DRAFT_0237 0.11 +1.0
244,193 - B158DRAFT_0237 0.11 -0.9
244,210 - B158DRAFT_0237 0.12 -0.3
244,212 + B158DRAFT_0237 0.12 -0.9
244,232 + B158DRAFT_0237 0.13 -0.4
244,240 - B158DRAFT_0237 0.13 -0.8
244,265 + B158DRAFT_0237 0.15 -0.0
244,312 + B158DRAFT_0237 0.17 -1.2
244,312 + B158DRAFT_0237 0.17 -0.6
244,320 - B158DRAFT_0237 0.17 -0.4
244,320 - B158DRAFT_0237 0.17 +1.1
244,320 - B158DRAFT_0237 0.17 -1.6
244,350 + B158DRAFT_0237 0.18 +1.1
244,374 + B158DRAFT_0237 0.19 +0.7
244,389 + B158DRAFT_0237 0.20 -0.2
244,389 + B158DRAFT_0237 0.20 -0.5
244,397 - B158DRAFT_0237 0.20 +0.0
244,400 + B158DRAFT_0237 0.20 -0.8
244,414 - B158DRAFT_0237 0.21 -1.4
244,418 + B158DRAFT_0237 0.21 -0.7
244,418 + B158DRAFT_0237 0.21 -1.1
244,465 + B158DRAFT_0237 0.23 -1.0
244,478 + B158DRAFT_0237 0.24 -1.3
244,478 + B158DRAFT_0237 0.24 -2.3
244,478 - B158DRAFT_0237 0.24 -0.7

Or see this region's nucleotide sequence