Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0178 and B158DRAFT_0179 are separated by 149 nucleotides B158DRAFT_0179 and B158DRAFT_0180 are separated by 2 nucleotides B158DRAFT_0180 and B158DRAFT_0181 are separated by 11 nucleotides
B158DRAFT_0178: B158DRAFT_0178 - adenosylhomocysteinase (EC 3.3.1.1), at 178,305 to 179,702
_0178
B158DRAFT_0179: B158DRAFT_0179 - adenosylmethionine-8-amino-7-oxononanoate transaminase, at 179,852 to 181,201
_0179
B158DRAFT_0180: B158DRAFT_0180 - RNA methyltransferase, RsmE family, at 181,204 to 181,932
_0180
B158DRAFT_0181: B158DRAFT_0181 - CheW-like domain., at 181,944 to 182,408
_0181
Position (kb) 179
180
181
182 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 179.591 kb on + strand at 181.195 kb on + strand at 181.203 kb on - strand at 181.203 kb on - strand at 181.255 kb on - strand at 181.530 kb on + strand, within B158DRAFT_0180 at 181.538 kb on - strand, within B158DRAFT_0180 at 181.558 kb on - strand, within B158DRAFT_0180 at 181.640 kb on - strand, within B158DRAFT_0180 at 181.658 kb on - strand, within B158DRAFT_0180 at 181.678 kb on + strand, within B158DRAFT_0180 at 181.686 kb on - strand, within B158DRAFT_0180 at 181.686 kb on - strand, within B158DRAFT_0180 at 181.686 kb on - strand, within B158DRAFT_0180 at 181.841 kb on + strand, within B158DRAFT_0180 at 181.841 kb on + strand, within B158DRAFT_0180 at 181.841 kb on + strand, within B158DRAFT_0180 at 181.841 kb on + strand, within B158DRAFT_0180 at 181.844 kb on + strand, within B158DRAFT_0180 at 181.844 kb on - strand, within B158DRAFT_0180 at 181.849 kb on - strand, within B158DRAFT_0180 at 181.849 kb on - strand, within B158DRAFT_0180 at 181.849 kb on - strand, within B158DRAFT_0180 at 181.849 kb on - strand, within B158DRAFT_0180 at 181.859 kb on - strand, within B158DRAFT_0180 at 181.866 kb on + strand at 181.895 kb on + strand at 181.954 kb on + strand at 181.988 kb on - strand at 181.999 kb on + strand, within B158DRAFT_0181 at 182.025 kb on + strand, within B158DRAFT_0181 at 182.025 kb on + strand, within B158DRAFT_0181 at 182.025 kb on + strand, within B158DRAFT_0181 at 182.025 kb on + strand, within B158DRAFT_0181 at 182.033 kb on - strand, within B158DRAFT_0181 at 182.035 kb on + strand, within B158DRAFT_0181 at 182.108 kb on - strand, within B158DRAFT_0181 at 182.141 kb on + strand, within B158DRAFT_0181
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 179,591 + +1.4 181,195 + +1.2 181,203 - -0.4 181,203 - +1.8 181,255 - -3.4 181,530 + B158DRAFT_0180 0.45 +0.1 181,538 - B158DRAFT_0180 0.46 -2.8 181,558 - B158DRAFT_0180 0.49 -0.4 181,640 - B158DRAFT_0180 0.60 -0.3 181,658 - B158DRAFT_0180 0.62 +2.3 181,678 + B158DRAFT_0180 0.65 -0.7 181,686 - B158DRAFT_0180 0.66 -1.0 181,686 - B158DRAFT_0180 0.66 +1.6 181,686 - B158DRAFT_0180 0.66 -1.0 181,841 + B158DRAFT_0180 0.87 +3.5 181,841 + B158DRAFT_0180 0.87 -0.0 181,841 + B158DRAFT_0180 0.87 -0.3 181,841 + B158DRAFT_0180 0.87 -0.9 181,844 + B158DRAFT_0180 0.88 +0.0 181,844 - B158DRAFT_0180 0.88 +0.9 181,849 - B158DRAFT_0180 0.88 -1.6 181,849 - B158DRAFT_0180 0.88 +0.5 181,849 - B158DRAFT_0180 0.88 +0.4 181,849 - B158DRAFT_0180 0.88 -2.4 181,859 - B158DRAFT_0180 0.90 +0.1 181,866 + -0.7 181,895 + -0.8 181,954 + +0.0 181,988 - -0.2 181,999 + B158DRAFT_0181 0.12 +0.4 182,025 + B158DRAFT_0181 0.17 -1.1 182,025 + B158DRAFT_0181 0.17 -1.3 182,025 + B158DRAFT_0181 0.17 +2.1 182,025 + B158DRAFT_0181 0.17 -0.7 182,033 - B158DRAFT_0181 0.19 +0.8 182,035 + B158DRAFT_0181 0.20 -0.9 182,108 - B158DRAFT_0181 0.35 -0.2 182,141 + B158DRAFT_0181 0.42 -0.6
Or see this region's nucleotide sequence