Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0132

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0131 and B158DRAFT_0132 are separated by 60 nucleotidesB158DRAFT_0132 and B158DRAFT_0133 are separated by 62 nucleotidesB158DRAFT_0133 and B158DRAFT_0134 are separated by 70 nucleotides B158DRAFT_0131: B158DRAFT_0131 - Predicted hydrolase of the alpha/beta-hydrolase fold, at 129,284 to 130,291 _0131 B158DRAFT_0132: B158DRAFT_0132 - hypothetical protein, at 130,352 to 131,191 _0132 B158DRAFT_0133: B158DRAFT_0133 - Uncharacterized iron-regulated protein, at 131,254 to 131,937 _0133 B158DRAFT_0134: B158DRAFT_0134 - Heme/copper-type cytochrome/quinol oxidase, subunit 3, at 132,008 to 132,880 _0134 Position (kb) 130 131 132Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 129.566 kb on + strand, within B158DRAFT_0131at 129.566 kb on + strand, within B158DRAFT_0131at 129.566 kb on + strand, within B158DRAFT_0131at 129.574 kb on - strand, within B158DRAFT_0131at 129.642 kb on + strand, within B158DRAFT_0131at 129.650 kb on - strand, within B158DRAFT_0131at 129.664 kb on + strand, within B158DRAFT_0131at 129.808 kb on - strand, within B158DRAFT_0131at 129.845 kb on - strand, within B158DRAFT_0131at 129.966 kb on + strand, within B158DRAFT_0131at 130.032 kb on - strand, within B158DRAFT_0131at 130.114 kb on - strand, within B158DRAFT_0131at 130.120 kb on - strand, within B158DRAFT_0131at 130.120 kb on - strand, within B158DRAFT_0131at 130.157 kb on + strand, within B158DRAFT_0131at 130.298 kb on + strandat 130.392 kb on + strandat 130.392 kb on + strandat 130.400 kb on - strandat 130.402 kb on - strandat 130.440 kb on - strand, within B158DRAFT_0132at 130.451 kb on - strand, within B158DRAFT_0132at 130.473 kb on + strand, within B158DRAFT_0132at 130.569 kb on + strand, within B158DRAFT_0132at 130.577 kb on + strand, within B158DRAFT_0132at 130.577 kb on - strand, within B158DRAFT_0132at 130.658 kb on + strand, within B158DRAFT_0132at 130.666 kb on - strand, within B158DRAFT_0132at 130.666 kb on - strand, within B158DRAFT_0132at 130.666 kb on - strand, within B158DRAFT_0132at 130.826 kb on - strand, within B158DRAFT_0132at 130.875 kb on + strand, within B158DRAFT_0132at 130.883 kb on - strand, within B158DRAFT_0132at 130.883 kb on - strand, within B158DRAFT_0132at 130.896 kb on - strand, within B158DRAFT_0132at 130.910 kb on + strand, within B158DRAFT_0132at 130.917 kb on - strand, within B158DRAFT_0132at 130.951 kb on + strand, within B158DRAFT_0132at 130.959 kb on - strand, within B158DRAFT_0132at 130.959 kb on - strand, within B158DRAFT_0132at 130.959 kb on - strand, within B158DRAFT_0132at 130.965 kb on + strand, within B158DRAFT_0132at 131.021 kb on + strand, within B158DRAFT_0132at 131.021 kb on + strand, within B158DRAFT_0132at 131.029 kb on - strand, within B158DRAFT_0132at 131.029 kb on - strand, within B158DRAFT_0132at 131.029 kb on - strand, within B158DRAFT_0132at 131.036 kb on + strand, within B158DRAFT_0132at 131.041 kb on + strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.049 kb on - strand, within B158DRAFT_0132at 131.054 kb on - strand, within B158DRAFT_0132at 131.056 kb on + strand, within B158DRAFT_0132at 131.056 kb on + strand, within B158DRAFT_0132at 131.056 kb on + strand, within B158DRAFT_0132at 131.087 kb on + strand, within B158DRAFT_0132at 131.152 kb on - strandat 131.154 kb on + strandat 131.164 kb on - strandat 131.201 kb on - strandat 131.318 kb on + strandat 131.318 kb on + strandat 131.326 kb on - strand, within B158DRAFT_0133at 131.328 kb on + strand, within B158DRAFT_0133at 131.375 kb on + strand, within B158DRAFT_0133at 131.377 kb on + strand, within B158DRAFT_0133at 131.377 kb on + strand, within B158DRAFT_0133at 131.377 kb on + strand, within B158DRAFT_0133at 131.377 kb on + strand, within B158DRAFT_0133at 131.383 kb on - strand, within B158DRAFT_0133at 131.383 kb on - strand, within B158DRAFT_0133at 131.385 kb on - strand, within B158DRAFT_0133at 131.385 kb on - strand, within B158DRAFT_0133at 131.391 kb on - strand, within B158DRAFT_0133at 131.419 kb on + strand, within B158DRAFT_0133at 131.443 kb on + strand, within B158DRAFT_0133at 131.519 kb on + strand, within B158DRAFT_0133at 131.626 kb on - strand, within B158DRAFT_0133at 131.634 kb on - strand, within B158DRAFT_0133at 131.634 kb on - strand, within B158DRAFT_0133at 131.663 kb on - strand, within B158DRAFT_0133at 131.694 kb on + strand, within B158DRAFT_0133at 131.712 kb on + strand, within B158DRAFT_0133at 131.841 kb on + strand, within B158DRAFT_0133at 131.849 kb on - strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.868 kb on + strand, within B158DRAFT_0133at 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.876 kb on - strandat 131.891 kb on - strandat 131.940 kb on - strandat 131.940 kb on - strandat 132.014 kb on - strandat 132.034 kb on + strandat 132.039 kb on + strandat 132.139 kb on - strand, within B158DRAFT_0134

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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129,566 + B158DRAFT_0131 0.28 -1.8
129,566 + B158DRAFT_0131 0.28 -0.7
129,566 + B158DRAFT_0131 0.28 -0.3
129,574 - B158DRAFT_0131 0.29 -0.2
129,642 + B158DRAFT_0131 0.36 -0.2
129,650 - B158DRAFT_0131 0.36 -0.6
129,664 + B158DRAFT_0131 0.38 -0.1
129,808 - B158DRAFT_0131 0.52 -1.5
129,845 - B158DRAFT_0131 0.56 -0.7
129,966 + B158DRAFT_0131 0.68 -0.7
130,032 - B158DRAFT_0131 0.74 -1.6
130,114 - B158DRAFT_0131 0.82 -1.0
130,120 - B158DRAFT_0131 0.83 -1.2
130,120 - B158DRAFT_0131 0.83 -1.3
130,157 + B158DRAFT_0131 0.87 -2.6
130,298 + +0.4
130,392 + -1.6
130,392 + -0.9
130,400 - -0.1
130,402 - -0.0
130,440 - B158DRAFT_0132 0.10 -0.4
130,451 - B158DRAFT_0132 0.12 -0.8
130,473 + B158DRAFT_0132 0.14 +0.3
130,569 + B158DRAFT_0132 0.26 -1.1
130,577 + B158DRAFT_0132 0.27 +0.5
130,577 - B158DRAFT_0132 0.27 -1.6
130,658 + B158DRAFT_0132 0.36 -2.4
130,666 - B158DRAFT_0132 0.37 -0.7
130,666 - B158DRAFT_0132 0.37 -1.2
130,666 - B158DRAFT_0132 0.37 -2.5
130,826 - B158DRAFT_0132 0.56 +0.1
130,875 + B158DRAFT_0132 0.62 -0.9
130,883 - B158DRAFT_0132 0.63 -1.0
130,883 - B158DRAFT_0132 0.63 +2.9
130,896 - B158DRAFT_0132 0.65 -0.2
130,910 + B158DRAFT_0132 0.66 -1.3
130,917 - B158DRAFT_0132 0.67 -1.0
130,951 + B158DRAFT_0132 0.71 -1.4
130,959 - B158DRAFT_0132 0.72 +1.4
130,959 - B158DRAFT_0132 0.72 -1.4
130,959 - B158DRAFT_0132 0.72 -0.6
130,965 + B158DRAFT_0132 0.73 +1.5
131,021 + B158DRAFT_0132 0.80 -0.2
131,021 + B158DRAFT_0132 0.80 -1.2
131,029 - B158DRAFT_0132 0.81 -0.1
131,029 - B158DRAFT_0132 0.81 -1.1
131,029 - B158DRAFT_0132 0.81 -1.8
131,036 + B158DRAFT_0132 0.81 +0.7
131,041 + B158DRAFT_0132 0.82 -0.7
131,049 - B158DRAFT_0132 0.83 +1.1
131,049 - B158DRAFT_0132 0.83 +2.6
131,049 - B158DRAFT_0132 0.83 -1.2
131,049 - B158DRAFT_0132 0.83 +0.3
131,049 - B158DRAFT_0132 0.83 -0.8
131,049 - B158DRAFT_0132 0.83 +1.2
131,054 - B158DRAFT_0132 0.84 -0.6
131,056 + B158DRAFT_0132 0.84 -2.7
131,056 + B158DRAFT_0132 0.84 +1.4
131,056 + B158DRAFT_0132 0.84 +0.3
131,087 + B158DRAFT_0132 0.88 -0.3
131,152 - +0.3
131,154 + +1.6
131,164 - -1.2
131,201 - +0.1
131,318 + -0.4
131,318 + +0.0
131,326 - B158DRAFT_0133 0.11 -0.8
131,328 + B158DRAFT_0133 0.11 -0.1
131,375 + B158DRAFT_0133 0.18 +0.3
131,377 + B158DRAFT_0133 0.18 -1.3
131,377 + B158DRAFT_0133 0.18 -0.8
131,377 + B158DRAFT_0133 0.18 -0.3
131,377 + B158DRAFT_0133 0.18 -1.2
131,383 - B158DRAFT_0133 0.19 -2.4
131,383 - B158DRAFT_0133 0.19 +0.5
131,385 - B158DRAFT_0133 0.19 -0.3
131,385 - B158DRAFT_0133 0.19 -2.8
131,391 - B158DRAFT_0133 0.20 +1.1
131,419 + B158DRAFT_0133 0.24 +0.1
131,443 + B158DRAFT_0133 0.28 +0.3
131,519 + B158DRAFT_0133 0.39 -1.1
131,626 - B158DRAFT_0133 0.54 -1.7
131,634 - B158DRAFT_0133 0.56 -2.5
131,634 - B158DRAFT_0133 0.56 -0.3
131,663 - B158DRAFT_0133 0.60 -0.4
131,694 + B158DRAFT_0133 0.64 -1.9
131,712 + B158DRAFT_0133 0.67 -0.9
131,841 + B158DRAFT_0133 0.86 +1.2
131,849 - B158DRAFT_0133 0.87 +0.1
131,868 + B158DRAFT_0133 0.90 -0.2
131,868 + B158DRAFT_0133 0.90 -0.4
131,868 + B158DRAFT_0133 0.90 +0.1
131,868 + B158DRAFT_0133 0.90 +1.3
131,868 + B158DRAFT_0133 0.90 -2.4
131,868 + B158DRAFT_0133 0.90 -0.1
131,868 + B158DRAFT_0133 0.90 +0.8
131,868 + B158DRAFT_0133 0.90 -1.0
131,868 + B158DRAFT_0133 0.90 +0.2
131,868 + B158DRAFT_0133 0.90 +0.2
131,868 + B158DRAFT_0133 0.90 -0.9
131,868 + B158DRAFT_0133 0.90 -0.1
131,868 + B158DRAFT_0133 0.90 -1.2
131,868 + B158DRAFT_0133 0.90 -1.3
131,868 + B158DRAFT_0133 0.90 +0.1
131,868 + B158DRAFT_0133 0.90 -0.4
131,868 + B158DRAFT_0133 0.90 -0.9
131,868 + B158DRAFT_0133 0.90 +0.6
131,868 + B158DRAFT_0133 0.90 +0.7
131,868 + B158DRAFT_0133 0.90 -1.1
131,868 + B158DRAFT_0133 0.90 -0.2
131,868 + B158DRAFT_0133 0.90 -0.5
131,876 - -1.3
131,876 - -0.2
131,876 - -0.6
131,876 - -0.8
131,876 - +1.2
131,876 - +0.5
131,876 - +1.4
131,876 - -0.5
131,876 - +0.9
131,876 - +0.1
131,876 - -0.7
131,876 - -0.8
131,876 - -0.3
131,876 - -2.0
131,876 - +0.7
131,891 - +0.5
131,940 - -1.3
131,940 - -0.9
132,014 - +0.4
132,034 + +0.2
132,039 + -0.5
132,139 - B158DRAFT_0134 0.15 +0.8

Or see this region's nucleotide sequence