Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2539 and B158DRAFT_2540 are separated by 60 nucleotides B158DRAFT_2540 and B158DRAFT_2541 are separated by 57 nucleotides B158DRAFT_2541 and B158DRAFT_2542 are separated by 183 nucleotides
B158DRAFT_2539: B158DRAFT_2539 - hypothetical protein, at 730,027 to 730,596
_2539
B158DRAFT_2540: B158DRAFT_2540 - hypothetical protein, at 730,657 to 731,133
_2540
B158DRAFT_2541: B158DRAFT_2541 - Protein of unknown function (DUF3579)., at 731,191 to 731,472
_2541
B158DRAFT_2542: B158DRAFT_2542 - Phosphatidylserine synthase, at 731,656 to 732,459
_2542
Position (kb) 731
732 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 730.308 kb on + strand, within B158DRAFT_2539 at 730.311 kb on - strand, within B158DRAFT_2539 at 730.311 kb on - strand, within B158DRAFT_2539 at 730.343 kb on + strand, within B158DRAFT_2539 at 730.357 kb on + strand, within B158DRAFT_2539 at 730.357 kb on + strand, within B158DRAFT_2539 at 730.357 kb on + strand, within B158DRAFT_2539 at 730.365 kb on - strand, within B158DRAFT_2539 at 730.365 kb on - strand, within B158DRAFT_2539 at 730.367 kb on + strand, within B158DRAFT_2539 at 730.377 kb on - strand, within B158DRAFT_2539 at 730.377 kb on - strand, within B158DRAFT_2539 at 730.398 kb on + strand, within B158DRAFT_2539 at 730.442 kb on - strand, within B158DRAFT_2539 at 730.442 kb on - strand, within B158DRAFT_2539 at 730.515 kb on + strand, within B158DRAFT_2539 at 730.541 kb on + strand at 730.555 kb on + strand at 730.719 kb on + strand, within B158DRAFT_2540 at 730.719 kb on + strand, within B158DRAFT_2540 at 730.727 kb on - strand, within B158DRAFT_2540 at 730.898 kb on + strand, within B158DRAFT_2540 at 730.914 kb on - strand, within B158DRAFT_2540 at 730.939 kb on + strand, within B158DRAFT_2540 at 731.064 kb on - strand, within B158DRAFT_2540 at 731.074 kb on - strand, within B158DRAFT_2540 at 731.089 kb on - strand at 731.236 kb on + strand, within B158DRAFT_2541 at 731.255 kb on + strand, within B158DRAFT_2541 at 731.263 kb on - strand, within B158DRAFT_2541 at 731.273 kb on - strand, within B158DRAFT_2541 at 731.273 kb on - strand, within B158DRAFT_2541 at 731.299 kb on + strand, within B158DRAFT_2541 at 731.299 kb on + strand, within B158DRAFT_2541 at 731.299 kb on - strand, within B158DRAFT_2541 at 731.307 kb on - strand, within B158DRAFT_2541 at 731.336 kb on + strand, within B158DRAFT_2541 at 731.336 kb on + strand, within B158DRAFT_2541 at 731.336 kb on + strand, within B158DRAFT_2541 at 731.339 kb on - strand, within B158DRAFT_2541 at 731.402 kb on + strand, within B158DRAFT_2541 at 731.402 kb on + strand, within B158DRAFT_2541 at 731.405 kb on - strand, within B158DRAFT_2541 at 731.410 kb on - strand, within B158DRAFT_2541 at 731.411 kb on - strand, within B158DRAFT_2541 at 731.455 kb on + strand at 731.463 kb on - strand at 731.493 kb on + strand at 731.527 kb on + strand at 731.573 kb on - strand at 731.575 kb on + strand at 731.575 kb on + strand at 731.583 kb on - strand at 731.596 kb on + strand at 731.596 kb on + strand at 731.596 kb on + strand at 731.606 kb on + strand at 731.606 kb on + strand at 732.362 kb on + strand, within B158DRAFT_2542 at 732.399 kb on + strand at 732.471 kb on - strand at 732.471 kb on - strand at 732.471 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 730,308 + B158DRAFT_2539 0.49 +0.5 730,311 - B158DRAFT_2539 0.50 -0.7 730,311 - B158DRAFT_2539 0.50 -0.8 730,343 + B158DRAFT_2539 0.55 -2.0 730,357 + B158DRAFT_2539 0.58 -1.1 730,357 + B158DRAFT_2539 0.58 -0.3 730,357 + B158DRAFT_2539 0.58 +3.6 730,365 - B158DRAFT_2539 0.59 -0.6 730,365 - B158DRAFT_2539 0.59 +1.4 730,367 + B158DRAFT_2539 0.60 +1.9 730,377 - B158DRAFT_2539 0.61 -1.2 730,377 - B158DRAFT_2539 0.61 +1.2 730,398 + B158DRAFT_2539 0.65 -1.0 730,442 - B158DRAFT_2539 0.73 -2.2 730,442 - B158DRAFT_2539 0.73 +0.2 730,515 + B158DRAFT_2539 0.86 +1.1 730,541 + +1.6 730,555 + +0.7 730,719 + B158DRAFT_2540 0.13 -1.7 730,719 + B158DRAFT_2540 0.13 -0.7 730,727 - B158DRAFT_2540 0.15 -1.0 730,898 + B158DRAFT_2540 0.51 +0.3 730,914 - B158DRAFT_2540 0.54 -0.2 730,939 + B158DRAFT_2540 0.59 -1.4 731,064 - B158DRAFT_2540 0.85 -1.1 731,074 - B158DRAFT_2540 0.87 +1.9 731,089 - -2.1 731,236 + B158DRAFT_2541 0.16 +0.2 731,255 + B158DRAFT_2541 0.23 -0.2 731,263 - B158DRAFT_2541 0.26 -0.3 731,273 - B158DRAFT_2541 0.29 +0.1 731,273 - B158DRAFT_2541 0.29 -0.4 731,299 + B158DRAFT_2541 0.38 +0.3 731,299 + B158DRAFT_2541 0.38 -0.0 731,299 - B158DRAFT_2541 0.38 -1.4 731,307 - B158DRAFT_2541 0.41 +0.7 731,336 + B158DRAFT_2541 0.51 +1.4 731,336 + B158DRAFT_2541 0.51 -0.2 731,336 + B158DRAFT_2541 0.51 -0.9 731,339 - B158DRAFT_2541 0.52 -0.5 731,402 + B158DRAFT_2541 0.75 +0.6 731,402 + B158DRAFT_2541 0.75 -1.7 731,405 - B158DRAFT_2541 0.76 -0.8 731,410 - B158DRAFT_2541 0.78 -1.1 731,411 - B158DRAFT_2541 0.78 -0.5 731,455 + +0.2 731,463 - +1.5 731,493 + -1.2 731,527 + +3.9 731,573 - +0.9 731,575 + -1.5 731,575 + +0.9 731,583 - -0.4 731,596 + +0.5 731,596 + -0.3 731,596 + -0.2 731,606 + -1.7 731,606 + +0.6 732,362 + B158DRAFT_2542 0.88 -1.5 732,399 + +0.5 732,471 - -1.6 732,471 - -0.3 732,471 - +2.2
Or see this region's nucleotide sequence