Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2539

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2537 and B158DRAFT_2538 are separated by 16 nucleotidesB158DRAFT_2538 and B158DRAFT_2539 are separated by 16 nucleotidesB158DRAFT_2539 and B158DRAFT_2540 are separated by 60 nucleotidesB158DRAFT_2540 and B158DRAFT_2541 are separated by 57 nucleotides B158DRAFT_2537: B158DRAFT_2537 - hypothetical protein, at 728,792 to 729,247 _2537 B158DRAFT_2538: B158DRAFT_2538 - hypothetical protein, at 729,264 to 730,010 _2538 B158DRAFT_2539: B158DRAFT_2539 - hypothetical protein, at 730,027 to 730,596 _2539 B158DRAFT_2540: B158DRAFT_2540 - hypothetical protein, at 730,657 to 731,133 _2540 B158DRAFT_2541: B158DRAFT_2541 - Protein of unknown function (DUF3579)., at 731,191 to 731,472 _2541 Position (kb) 730 731Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 729.036 kb on + strand, within B158DRAFT_2537at 729.036 kb on + strand, within B158DRAFT_2537at 729.044 kb on - strand, within B158DRAFT_2537at 729.044 kb on - strand, within B158DRAFT_2537at 729.080 kb on + strand, within B158DRAFT_2537at 729.166 kb on + strand, within B158DRAFT_2537at 729.166 kb on + strand, within B158DRAFT_2537at 729.183 kb on + strand, within B158DRAFT_2537at 729.183 kb on + strand, within B158DRAFT_2537at 729.191 kb on + strand, within B158DRAFT_2537at 729.191 kb on - strand, within B158DRAFT_2537at 729.191 kb on - strand, within B158DRAFT_2537at 729.191 kb on - strand, within B158DRAFT_2537at 729.191 kb on - strand, within B158DRAFT_2537at 729.191 kb on - strand, within B158DRAFT_2537at 729.199 kb on - strand, within B158DRAFT_2537at 729.209 kb on - strandat 729.216 kb on + strandat 729.219 kb on - strandat 729.224 kb on - strandat 729.224 kb on - strandat 729.224 kb on - strandat 729.224 kb on - strandat 729.224 kb on - strandat 729.224 kb on - strandat 729.226 kb on + strandat 729.234 kb on - strandat 729.234 kb on - strandat 729.293 kb on - strandat 729.299 kb on - strandat 729.299 kb on - strandat 729.299 kb on - strandat 729.324 kb on - strandat 729.354 kb on + strand, within B158DRAFT_2538at 729.364 kb on + strand, within B158DRAFT_2538at 729.432 kb on + strand, within B158DRAFT_2538at 729.432 kb on + strand, within B158DRAFT_2538at 729.440 kb on - strand, within B158DRAFT_2538at 729.453 kb on - strand, within B158DRAFT_2538at 729.487 kb on - strand, within B158DRAFT_2538at 729.487 kb on - strand, within B158DRAFT_2538at 729.489 kb on + strand, within B158DRAFT_2538at 729.497 kb on - strand, within B158DRAFT_2538at 729.497 kb on - strand, within B158DRAFT_2538at 729.497 kb on - strand, within B158DRAFT_2538at 729.497 kb on - strand, within B158DRAFT_2538at 729.497 kb on - strand, within B158DRAFT_2538at 729.524 kb on + strand, within B158DRAFT_2538at 729.532 kb on - strand, within B158DRAFT_2538at 729.570 kb on + strand, within B158DRAFT_2538at 729.578 kb on - strand, within B158DRAFT_2538at 729.632 kb on - strand, within B158DRAFT_2538at 729.652 kb on + strand, within B158DRAFT_2538at 729.652 kb on + strand, within B158DRAFT_2538at 729.652 kb on + strand, within B158DRAFT_2538at 729.652 kb on + strand, within B158DRAFT_2538at 729.652 kb on + strand, within B158DRAFT_2538at 729.660 kb on - strand, within B158DRAFT_2538at 729.677 kb on - strand, within B158DRAFT_2538at 729.713 kb on + strand, within B158DRAFT_2538at 729.735 kb on - strand, within B158DRAFT_2538at 729.735 kb on - strand, within B158DRAFT_2538at 729.785 kb on - strand, within B158DRAFT_2538at 729.804 kb on + strand, within B158DRAFT_2538at 729.813 kb on + strand, within B158DRAFT_2538at 729.822 kb on - strand, within B158DRAFT_2538at 729.846 kb on + strand, within B158DRAFT_2538at 729.856 kb on + strand, within B158DRAFT_2538at 729.856 kb on + strand, within B158DRAFT_2538at 729.856 kb on + strand, within B158DRAFT_2538at 729.856 kb on + strand, within B158DRAFT_2538at 729.856 kb on + strand, within B158DRAFT_2538at 729.864 kb on - strand, within B158DRAFT_2538at 729.864 kb on - strand, within B158DRAFT_2538at 729.864 kb on - strand, within B158DRAFT_2538at 729.864 kb on - strand, within B158DRAFT_2538at 729.864 kb on - strand, within B158DRAFT_2538at 729.928 kb on + strand, within B158DRAFT_2538at 729.928 kb on + strand, within B158DRAFT_2538at 729.936 kb on - strandat 730.094 kb on + strand, within B158DRAFT_2539at 730.094 kb on + strand, within B158DRAFT_2539at 730.094 kb on + strand, within B158DRAFT_2539at 730.094 kb on + strand, within B158DRAFT_2539at 730.094 kb on + strand, within B158DRAFT_2539at 730.094 kb on + strand, within B158DRAFT_2539at 730.095 kb on + strand, within B158DRAFT_2539at 730.102 kb on - strand, within B158DRAFT_2539at 730.104 kb on + strand, within B158DRAFT_2539at 730.104 kb on + strand, within B158DRAFT_2539at 730.308 kb on + strand, within B158DRAFT_2539at 730.311 kb on - strand, within B158DRAFT_2539at 730.311 kb on - strand, within B158DRAFT_2539at 730.343 kb on + strand, within B158DRAFT_2539at 730.357 kb on + strand, within B158DRAFT_2539at 730.357 kb on + strand, within B158DRAFT_2539at 730.357 kb on + strand, within B158DRAFT_2539at 730.365 kb on - strand, within B158DRAFT_2539at 730.365 kb on - strand, within B158DRAFT_2539at 730.367 kb on + strand, within B158DRAFT_2539at 730.377 kb on - strand, within B158DRAFT_2539at 730.377 kb on - strand, within B158DRAFT_2539at 730.398 kb on + strand, within B158DRAFT_2539at 730.442 kb on - strand, within B158DRAFT_2539at 730.442 kb on - strand, within B158DRAFT_2539at 730.515 kb on + strand, within B158DRAFT_2539at 730.541 kb on + strandat 730.555 kb on + strandat 730.719 kb on + strand, within B158DRAFT_2540at 730.719 kb on + strand, within B158DRAFT_2540at 730.727 kb on - strand, within B158DRAFT_2540at 730.898 kb on + strand, within B158DRAFT_2540at 730.914 kb on - strand, within B158DRAFT_2540at 730.939 kb on + strand, within B158DRAFT_2540at 731.064 kb on - strand, within B158DRAFT_2540at 731.074 kb on - strand, within B158DRAFT_2540at 731.089 kb on - strandat 731.236 kb on + strand, within B158DRAFT_2541at 731.255 kb on + strand, within B158DRAFT_2541at 731.263 kb on - strand, within B158DRAFT_2541at 731.273 kb on - strand, within B158DRAFT_2541at 731.273 kb on - strand, within B158DRAFT_2541at 731.299 kb on + strand, within B158DRAFT_2541at 731.299 kb on + strand, within B158DRAFT_2541at 731.299 kb on - strand, within B158DRAFT_2541at 731.307 kb on - strand, within B158DRAFT_2541at 731.336 kb on + strand, within B158DRAFT_2541at 731.336 kb on + strand, within B158DRAFT_2541at 731.336 kb on + strand, within B158DRAFT_2541at 731.339 kb on - strand, within B158DRAFT_2541at 731.402 kb on + strand, within B158DRAFT_2541at 731.402 kb on + strand, within B158DRAFT_2541at 731.405 kb on - strand, within B158DRAFT_2541at 731.410 kb on - strand, within B158DRAFT_2541at 731.411 kb on - strand, within B158DRAFT_2541at 731.455 kb on + strandat 731.463 kb on - strandat 731.493 kb on + strandat 731.527 kb on + strandat 731.573 kb on - strandat 731.575 kb on + strandat 731.575 kb on + strandat 731.583 kb on - strandat 731.596 kb on + strandat 731.596 kb on + strandat 731.596 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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729,036 + B158DRAFT_2537 0.54 -1.3
729,036 + B158DRAFT_2537 0.54 +0.1
729,044 - B158DRAFT_2537 0.55 +0.7
729,044 - B158DRAFT_2537 0.55 -0.1
729,080 + B158DRAFT_2537 0.63 +1.2
729,166 + B158DRAFT_2537 0.82 +0.9
729,166 + B158DRAFT_2537 0.82 +3.1
729,183 + B158DRAFT_2537 0.86 -0.6
729,183 + B158DRAFT_2537 0.86 -2.9
729,191 + B158DRAFT_2537 0.88 +3.0
729,191 - B158DRAFT_2537 0.88 +0.3
729,191 - B158DRAFT_2537 0.88 -1.4
729,191 - B158DRAFT_2537 0.88 +1.7
729,191 - B158DRAFT_2537 0.88 -0.4
729,191 - B158DRAFT_2537 0.88 +0.2
729,199 - B158DRAFT_2537 0.89 -2.1
729,209 - -0.9
729,216 + -0.9
729,219 - +0.1
729,224 - -1.0
729,224 - -0.2
729,224 - -0.9
729,224 - -0.8
729,224 - +0.2
729,224 - -0.4
729,226 + +1.5
729,234 - -1.2
729,234 - -1.1
729,293 - -0.1
729,299 - -0.6
729,299 - -1.5
729,299 - -1.3
729,324 - +0.8
729,354 + B158DRAFT_2538 0.12 -1.1
729,364 + B158DRAFT_2538 0.13 -1.0
729,432 + B158DRAFT_2538 0.22 +1.9
729,432 + B158DRAFT_2538 0.22 -0.8
729,440 - B158DRAFT_2538 0.24 -2.0
729,453 - B158DRAFT_2538 0.25 -0.5
729,487 - B158DRAFT_2538 0.30 -0.6
729,487 - B158DRAFT_2538 0.30 +4.4
729,489 + B158DRAFT_2538 0.30 -1.2
729,497 - B158DRAFT_2538 0.31 -0.9
729,497 - B158DRAFT_2538 0.31 -0.6
729,497 - B158DRAFT_2538 0.31 -1.3
729,497 - B158DRAFT_2538 0.31 +0.0
729,497 - B158DRAFT_2538 0.31 -1.2
729,524 + B158DRAFT_2538 0.35 -0.8
729,532 - B158DRAFT_2538 0.36 -1.2
729,570 + B158DRAFT_2538 0.41 +0.0
729,578 - B158DRAFT_2538 0.42 -0.8
729,632 - B158DRAFT_2538 0.49 -1.1
729,652 + B158DRAFT_2538 0.52 -0.1
729,652 + B158DRAFT_2538 0.52 -0.1
729,652 + B158DRAFT_2538 0.52 -1.3
729,652 + B158DRAFT_2538 0.52 +1.5
729,652 + B158DRAFT_2538 0.52 +1.5
729,660 - B158DRAFT_2538 0.53 -1.6
729,677 - B158DRAFT_2538 0.55 -0.8
729,713 + B158DRAFT_2538 0.60 -0.8
729,735 - B158DRAFT_2538 0.63 -0.8
729,735 - B158DRAFT_2538 0.63 -0.1
729,785 - B158DRAFT_2538 0.70 +0.9
729,804 + B158DRAFT_2538 0.72 -0.2
729,813 + B158DRAFT_2538 0.73 -0.8
729,822 - B158DRAFT_2538 0.75 -1.0
729,846 + B158DRAFT_2538 0.78 -1.0
729,856 + B158DRAFT_2538 0.79 -0.4
729,856 + B158DRAFT_2538 0.79 +0.2
729,856 + B158DRAFT_2538 0.79 +2.3
729,856 + B158DRAFT_2538 0.79 -0.3
729,856 + B158DRAFT_2538 0.79 +0.7
729,864 - B158DRAFT_2538 0.80 -0.4
729,864 - B158DRAFT_2538 0.80 -0.5
729,864 - B158DRAFT_2538 0.80 +0.1
729,864 - B158DRAFT_2538 0.80 -1.6
729,864 - B158DRAFT_2538 0.80 +0.9
729,928 + B158DRAFT_2538 0.89 +0.5
729,928 + B158DRAFT_2538 0.89 -1.1
729,936 - +0.1
730,094 + B158DRAFT_2539 0.12 -1.8
730,094 + B158DRAFT_2539 0.12 -1.3
730,094 + B158DRAFT_2539 0.12 -1.1
730,094 + B158DRAFT_2539 0.12 -0.8
730,094 + B158DRAFT_2539 0.12 -0.5
730,094 + B158DRAFT_2539 0.12 +0.1
730,095 + B158DRAFT_2539 0.12 -1.1
730,102 - B158DRAFT_2539 0.13 +1.6
730,104 + B158DRAFT_2539 0.14 +1.5
730,104 + B158DRAFT_2539 0.14 +1.6
730,308 + B158DRAFT_2539 0.49 +0.5
730,311 - B158DRAFT_2539 0.50 -0.7
730,311 - B158DRAFT_2539 0.50 -0.8
730,343 + B158DRAFT_2539 0.55 -2.0
730,357 + B158DRAFT_2539 0.58 -1.1
730,357 + B158DRAFT_2539 0.58 -0.3
730,357 + B158DRAFT_2539 0.58 +3.6
730,365 - B158DRAFT_2539 0.59 -0.6
730,365 - B158DRAFT_2539 0.59 +1.4
730,367 + B158DRAFT_2539 0.60 +1.9
730,377 - B158DRAFT_2539 0.61 -1.2
730,377 - B158DRAFT_2539 0.61 +1.2
730,398 + B158DRAFT_2539 0.65 -1.0
730,442 - B158DRAFT_2539 0.73 -2.2
730,442 - B158DRAFT_2539 0.73 +0.2
730,515 + B158DRAFT_2539 0.86 +1.1
730,541 + +1.6
730,555 + +0.7
730,719 + B158DRAFT_2540 0.13 -1.7
730,719 + B158DRAFT_2540 0.13 -0.7
730,727 - B158DRAFT_2540 0.15 -1.0
730,898 + B158DRAFT_2540 0.51 +0.3
730,914 - B158DRAFT_2540 0.54 -0.2
730,939 + B158DRAFT_2540 0.59 -1.4
731,064 - B158DRAFT_2540 0.85 -1.1
731,074 - B158DRAFT_2540 0.87 +1.9
731,089 - -2.1
731,236 + B158DRAFT_2541 0.16 +0.2
731,255 + B158DRAFT_2541 0.23 -0.2
731,263 - B158DRAFT_2541 0.26 -0.3
731,273 - B158DRAFT_2541 0.29 +0.1
731,273 - B158DRAFT_2541 0.29 -0.4
731,299 + B158DRAFT_2541 0.38 +0.3
731,299 + B158DRAFT_2541 0.38 -0.0
731,299 - B158DRAFT_2541 0.38 -1.4
731,307 - B158DRAFT_2541 0.41 +0.7
731,336 + B158DRAFT_2541 0.51 +1.4
731,336 + B158DRAFT_2541 0.51 -0.2
731,336 + B158DRAFT_2541 0.51 -0.9
731,339 - B158DRAFT_2541 0.52 -0.5
731,402 + B158DRAFT_2541 0.75 +0.6
731,402 + B158DRAFT_2541 0.75 -1.7
731,405 - B158DRAFT_2541 0.76 -0.8
731,410 - B158DRAFT_2541 0.78 -1.1
731,411 - B158DRAFT_2541 0.78 -0.5
731,455 + +0.2
731,463 - +1.5
731,493 + -1.2
731,527 + +3.9
731,573 - +0.9
731,575 + -1.5
731,575 + +0.9
731,583 - -0.4
731,596 + +0.5
731,596 + -0.3
731,596 + -0.2

Or see this region's nucleotide sequence