Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2507 and B158DRAFT_2508 are separated by 21 nucleotides B158DRAFT_2508 and B158DRAFT_2509 are separated by 15 nucleotides B158DRAFT_2509 and B158DRAFT_2510 are separated by 15 nucleotides
B158DRAFT_2507: B158DRAFT_2507 - Acetyl/propionyl-CoA carboxylase, alpha subunit, at 693,375 to 695,384
_2507
B158DRAFT_2508: B158DRAFT_2508 - Enoyl-CoA hydratase/carnithine racemase, at 695,406 to 696,236
_2508
B158DRAFT_2509: B158DRAFT_2509 - Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta), at 696,252 to 697,862
_2509
B158DRAFT_2510: B158DRAFT_2510 - Acyl-CoA dehydrogenases, at 697,878 to 699,014
_2510
Position (kb) 696
697
698 Strain fitness (log2 ratio) -1
0
1
2 at 696.240 kb on - strand at 696.257 kb on - strand at 697.941 kb on - strand at 697.941 kb on - strand at 697.941 kb on - strand at 698.053 kb on - strand, within B158DRAFT_2510 at 698.086 kb on - strand, within B158DRAFT_2510 at 698.086 kb on - strand, within B158DRAFT_2510 at 698.086 kb on - strand, within B158DRAFT_2510 at 698.086 kb on - strand, within B158DRAFT_2510 at 698.086 kb on - strand, within B158DRAFT_2510 at 698.086 kb on - strand, within B158DRAFT_2510 at 698.086 kb on - strand, within B158DRAFT_2510 at 698.086 kb on - strand, within B158DRAFT_2510 at 698.086 kb on - strand, within B158DRAFT_2510 at 698.086 kb on - strand, within B158DRAFT_2510 at 698.096 kb on - strand, within B158DRAFT_2510 at 698.116 kb on - strand, within B158DRAFT_2510 at 698.126 kb on - strand, within B158DRAFT_2510 at 698.135 kb on - strand, within B158DRAFT_2510 at 698.190 kb on - strand, within B158DRAFT_2510 at 698.262 kb on - strand, within B158DRAFT_2510 at 698.279 kb on - strand, within B158DRAFT_2510 at 698.330 kb on - strand, within B158DRAFT_2510 at 698.336 kb on - strand, within B158DRAFT_2510 at 698.404 kb on - strand, within B158DRAFT_2510 at 698.404 kb on - strand, within B158DRAFT_2510 at 698.447 kb on - strand, within B158DRAFT_2510 at 698.452 kb on - strand, within B158DRAFT_2510 at 698.452 kb on - strand, within B158DRAFT_2510 at 698.492 kb on - strand, within B158DRAFT_2510 at 698.502 kb on - strand, within B158DRAFT_2510 at 698.566 kb on - strand, within B158DRAFT_2510 at 698.566 kb on - strand, within B158DRAFT_2510 at 698.607 kb on - strand, within B158DRAFT_2510 at 698.813 kb on - strand, within B158DRAFT_2510 at 698.813 kb on - strand, within B158DRAFT_2510 at 698.813 kb on - strand, within B158DRAFT_2510
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 696,240 - +1.6 696,257 - +2.6 697,941 - +1.0 697,941 - +1.4 697,941 - -0.2 698,053 - B158DRAFT_2510 0.15 +1.9 698,086 - B158DRAFT_2510 0.18 -1.3 698,086 - B158DRAFT_2510 0.18 +0.8 698,086 - B158DRAFT_2510 0.18 +0.2 698,086 - B158DRAFT_2510 0.18 +0.6 698,086 - B158DRAFT_2510 0.18 -0.0 698,086 - B158DRAFT_2510 0.18 +0.6 698,086 - B158DRAFT_2510 0.18 +0.6 698,086 - B158DRAFT_2510 0.18 +1.2 698,086 - B158DRAFT_2510 0.18 +0.7 698,086 - B158DRAFT_2510 0.18 -0.3 698,096 - B158DRAFT_2510 0.19 -0.5 698,116 - B158DRAFT_2510 0.21 -0.3 698,126 - B158DRAFT_2510 0.22 -0.3 698,135 - B158DRAFT_2510 0.23 -0.1 698,190 - B158DRAFT_2510 0.27 +1.3 698,262 - B158DRAFT_2510 0.34 +1.5 698,279 - B158DRAFT_2510 0.35 +1.3 698,330 - B158DRAFT_2510 0.40 -1.1 698,336 - B158DRAFT_2510 0.40 -0.1 698,404 - B158DRAFT_2510 0.46 +0.8 698,404 - B158DRAFT_2510 0.46 -0.1 698,447 - B158DRAFT_2510 0.50 -0.3 698,452 - B158DRAFT_2510 0.50 +0.5 698,452 - B158DRAFT_2510 0.50 +0.6 698,492 - B158DRAFT_2510 0.54 +2.3 698,502 - B158DRAFT_2510 0.55 +0.1 698,566 - B158DRAFT_2510 0.61 +2.0 698,566 - B158DRAFT_2510 0.61 -0.1 698,607 - B158DRAFT_2510 0.64 -1.4 698,813 - B158DRAFT_2510 0.82 +0.1 698,813 - B158DRAFT_2510 0.82 -1.7 698,813 - B158DRAFT_2510 0.82 -0.5
Or see this region's nucleotide sequence