Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2403

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2401 and B158DRAFT_2402 are separated by 262 nucleotidesB158DRAFT_2402 and B158DRAFT_2403 are separated by 179 nucleotidesB158DRAFT_2403 and B158DRAFT_2404 are separated by 203 nucleotides B158DRAFT_2401: B158DRAFT_2401 - Protein of unknown function (DUF1329)., at 572,228 to 573,580 _2401 B158DRAFT_2402: B158DRAFT_2402 - Transcriptional regulators, at 573,843 to 574,283 _2402 B158DRAFT_2403: B158DRAFT_2403 - ribosomal protein S20, at 574,463 to 574,723 _2403 B158DRAFT_2404: B158DRAFT_2404 - integral membrane protein MviN, at 574,927 to 576,462 _2404 Position (kb) 574 575Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7at 573.468 kb on + strandat 573.468 kb on + strandat 573.473 kb on + strandat 573.473 kb on + strandat 573.476 kb on - strandat 573.476 kb on - strandat 573.476 kb on - strandat 573.485 kb on + strandat 573.485 kb on + strandat 573.493 kb on - strandat 573.547 kb on - strandat 573.625 kb on + strandat 573.975 kb on + strand, within B158DRAFT_2402at 573.993 kb on - strand, within B158DRAFT_2402at 574.018 kb on - strand, within B158DRAFT_2402at 574.028 kb on + strand, within B158DRAFT_2402at 574.029 kb on - strand, within B158DRAFT_2402at 574.036 kb on - strand, within B158DRAFT_2402at 574.049 kb on - strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.118 kb on + strand, within B158DRAFT_2402at 574.123 kb on + strand, within B158DRAFT_2402at 574.123 kb on + strand, within B158DRAFT_2402at 574.123 kb on + strand, within B158DRAFT_2402at 574.123 kb on + strand, within B158DRAFT_2402at 574.126 kb on - strand, within B158DRAFT_2402at 574.126 kb on - strand, within B158DRAFT_2402at 574.126 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.131 kb on - strand, within B158DRAFT_2402at 574.144 kb on - strand, within B158DRAFT_2402at 574.207 kb on + strand, within B158DRAFT_2402at 574.215 kb on + strand, within B158DRAFT_2402at 574.215 kb on - strand, within B158DRAFT_2402at 574.249 kb on - strandat 574.338 kb on + strandat 574.338 kb on + strandat 574.338 kb on + strandat 574.346 kb on - strandat 574.346 kb on - strandat 574.429 kb on + strandat 574.478 kb on - strandat 574.478 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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573,468 + -1.2
573,468 + -0.0
573,473 + +7.5
573,473 + +2.7
573,476 - -0.9
573,476 - +0.4
573,476 - +0.4
573,485 + -0.3
573,485 + -1.8
573,493 - +0.0
573,547 - -1.3
573,625 + -0.8
573,975 + B158DRAFT_2402 0.30 +0.4
573,993 - B158DRAFT_2402 0.34 +1.7
574,018 - B158DRAFT_2402 0.40 -0.6
574,028 + B158DRAFT_2402 0.42 -1.0
574,029 - B158DRAFT_2402 0.42 -0.4
574,036 - B158DRAFT_2402 0.44 -1.0
574,049 - B158DRAFT_2402 0.47 +1.3
574,118 + B158DRAFT_2402 0.62 -1.3
574,118 + B158DRAFT_2402 0.62 -0.0
574,118 + B158DRAFT_2402 0.62 -1.8
574,118 + B158DRAFT_2402 0.62 -0.5
574,118 + B158DRAFT_2402 0.62 -0.3
574,123 + B158DRAFT_2402 0.63 -0.8
574,123 + B158DRAFT_2402 0.63 -1.6
574,123 + B158DRAFT_2402 0.63 -1.5
574,123 + B158DRAFT_2402 0.63 -0.3
574,126 - B158DRAFT_2402 0.64 +0.0
574,126 - B158DRAFT_2402 0.64 -1.0
574,126 - B158DRAFT_2402 0.64 -2.2
574,131 - B158DRAFT_2402 0.65 -0.6
574,131 - B158DRAFT_2402 0.65 -1.6
574,131 - B158DRAFT_2402 0.65 -0.7
574,131 - B158DRAFT_2402 0.65 -1.2
574,131 - B158DRAFT_2402 0.65 -0.4
574,131 - B158DRAFT_2402 0.65 -2.2
574,131 - B158DRAFT_2402 0.65 -0.8
574,131 - B158DRAFT_2402 0.65 -1.5
574,144 - B158DRAFT_2402 0.68 +0.9
574,207 + B158DRAFT_2402 0.83 -0.7
574,215 + B158DRAFT_2402 0.84 -1.0
574,215 - B158DRAFT_2402 0.84 -1.7
574,249 - +3.1
574,338 + -0.9
574,338 + -2.0
574,338 + +2.5
574,346 - -0.2
574,346 - -0.5
574,429 + -0.9
574,478 - -0.5
574,478 - +0.6

Or see this region's nucleotide sequence