Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2377 and B158DRAFT_2378 are separated by 93 nucleotides B158DRAFT_2378 and B158DRAFT_2379 are separated by 42 nucleotides
B158DRAFT_2377: B158DRAFT_2377 - gamma-glutamyltranspeptidase, at 547,056 to 548,792
_2377
B158DRAFT_2378: B158DRAFT_2378 - hypothetical protein, at 548,886 to 549,395
_2378
B158DRAFT_2379: B158DRAFT_2379 - methionyl-tRNA synthetase (EC 6.1.1.10), at 549,438 to 551,462
_2379
Position (kb) 548
549
550 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 547.913 kb on + strand, within B158DRAFT_2377 at 548.035 kb on - strand, within B158DRAFT_2377 at 548.035 kb on - strand, within B158DRAFT_2377 at 548.081 kb on - strand, within B158DRAFT_2377 at 548.152 kb on + strand, within B158DRAFT_2377 at 548.152 kb on + strand, within B158DRAFT_2377 at 548.152 kb on - strand, within B158DRAFT_2377 at 548.160 kb on - strand, within B158DRAFT_2377 at 548.162 kb on + strand, within B158DRAFT_2377 at 548.162 kb on + strand, within B158DRAFT_2377 at 548.170 kb on - strand, within B158DRAFT_2377 at 548.170 kb on - strand, within B158DRAFT_2377 at 548.241 kb on + strand, within B158DRAFT_2377 at 548.241 kb on + strand, within B158DRAFT_2377 at 548.255 kb on + strand, within B158DRAFT_2377 at 548.257 kb on + strand, within B158DRAFT_2377 at 548.263 kb on - strand, within B158DRAFT_2377 at 548.267 kb on + strand, within B158DRAFT_2377 at 548.267 kb on + strand, within B158DRAFT_2377 at 548.267 kb on + strand, within B158DRAFT_2377 at 548.275 kb on - strand, within B158DRAFT_2377 at 548.366 kb on + strand, within B158DRAFT_2377 at 548.366 kb on + strand, within B158DRAFT_2377 at 548.366 kb on + strand, within B158DRAFT_2377 at 548.374 kb on - strand, within B158DRAFT_2377 at 548.374 kb on - strand, within B158DRAFT_2377 at 548.374 kb on - strand, within B158DRAFT_2377 at 548.376 kb on + strand, within B158DRAFT_2377 at 548.457 kb on - strand, within B158DRAFT_2377 at 548.579 kb on + strand, within B158DRAFT_2377 at 548.652 kb on - strand at 548.663 kb on + strand at 548.685 kb on - strand at 548.705 kb on + strand at 548.705 kb on + strand at 548.710 kb on + strand at 548.713 kb on - strand at 548.713 kb on - strand at 548.713 kb on - strand at 548.713 kb on - strand at 548.713 kb on - strand at 548.713 kb on - strand at 548.713 kb on - strand at 548.713 kb on - strand at 548.721 kb on + strand at 548.908 kb on + strand at 548.921 kb on - strand at 548.933 kb on + strand at 549.315 kb on + strand, within B158DRAFT_2378 at 549.315 kb on + strand, within B158DRAFT_2378
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 547,913 + B158DRAFT_2377 0.49 -0.5 548,035 - B158DRAFT_2377 0.56 -2.2 548,035 - B158DRAFT_2377 0.56 +0.8 548,081 - B158DRAFT_2377 0.59 +0.3 548,152 + B158DRAFT_2377 0.63 -1.5 548,152 + B158DRAFT_2377 0.63 -1.8 548,152 - B158DRAFT_2377 0.63 +0.4 548,160 - B158DRAFT_2377 0.64 -1.9 548,162 + B158DRAFT_2377 0.64 +3.8 548,162 + B158DRAFT_2377 0.64 +0.7 548,170 - B158DRAFT_2377 0.64 -0.4 548,170 - B158DRAFT_2377 0.64 -0.6 548,241 + B158DRAFT_2377 0.68 -0.8 548,241 + B158DRAFT_2377 0.68 -0.5 548,255 + B158DRAFT_2377 0.69 -0.6 548,257 + B158DRAFT_2377 0.69 -1.2 548,263 - B158DRAFT_2377 0.69 -1.1 548,267 + B158DRAFT_2377 0.70 +0.6 548,267 + B158DRAFT_2377 0.70 -1.4 548,267 + B158DRAFT_2377 0.70 -1.6 548,275 - B158DRAFT_2377 0.70 -0.4 548,366 + B158DRAFT_2377 0.75 -1.1 548,366 + B158DRAFT_2377 0.75 +3.5 548,366 + B158DRAFT_2377 0.75 -0.1 548,374 - B158DRAFT_2377 0.76 +0.2 548,374 - B158DRAFT_2377 0.76 -0.1 548,374 - B158DRAFT_2377 0.76 -0.8 548,376 + B158DRAFT_2377 0.76 -0.9 548,457 - B158DRAFT_2377 0.81 -2.2 548,579 + B158DRAFT_2377 0.88 +2.3 548,652 - -1.5 548,663 + +0.0 548,685 - -1.3 548,705 + +0.2 548,705 + -1.0 548,710 + -1.4 548,713 - -1.3 548,713 - -0.4 548,713 - -1.3 548,713 - +0.8 548,713 - -1.1 548,713 - -0.0 548,713 - +0.7 548,713 - -0.4 548,721 + -0.6 548,908 + -1.1 548,921 - -0.4 548,933 + -0.5 549,315 + B158DRAFT_2378 0.84 +0.2 549,315 + B158DRAFT_2378 0.84 +1.9
Or see this region's nucleotide sequence