Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2345 and B158DRAFT_2346 are separated by 42 nucleotides B158DRAFT_2346 and B158DRAFT_2347 overlap by 8 nucleotides B158DRAFT_2347 and B158DRAFT_2348 are separated by 2 nucleotides B158DRAFT_2348 and B158DRAFT_2349 overlap by 4 nucleotides
B158DRAFT_2345: B158DRAFT_2345 - hypothetical protein, at 510,440 to 511,897
_2345
B158DRAFT_2346: B158DRAFT_2346 - hypothetical protein, at 511,940 to 512,347
_2346
B158DRAFT_2347: B158DRAFT_2347 - Periplasmic protein involved in polysaccharide export, at 512,340 to 514,139
_2347
B158DRAFT_2348: B158DRAFT_2348 - ABC-type polysaccharide/polyol phosphate export systems, permease component, at 514,142 to 514,927
_2348
B158DRAFT_2349: B158DRAFT_2349 - ABC-type polysaccharide/polyol phosphate transport system, ATPase component, at 514,924 to 515,574
_2349
Position (kb) 512
513
514
515 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6
7 at 511.422 kb on + strand, within B158DRAFT_2345 at 511.533 kb on + strand, within B158DRAFT_2345 at 511.533 kb on + strand, within B158DRAFT_2345 at 511.533 kb on + strand, within B158DRAFT_2345 at 511.533 kb on + strand, within B158DRAFT_2345 at 511.533 kb on + strand, within B158DRAFT_2345 at 511.541 kb on - strand, within B158DRAFT_2345 at 511.541 kb on - strand, within B158DRAFT_2345 at 511.541 kb on - strand, within B158DRAFT_2345 at 511.593 kb on + strand, within B158DRAFT_2345 at 512.014 kb on - strand, within B158DRAFT_2346 at 512.315 kb on + strand at 514.077 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 511,422 + B158DRAFT_2345 0.67 +3.3 511,533 + B158DRAFT_2345 0.75 -0.3 511,533 + B158DRAFT_2345 0.75 +1.7 511,533 + B158DRAFT_2345 0.75 +2.7 511,533 + B158DRAFT_2345 0.75 +1.3 511,533 + B158DRAFT_2345 0.75 +0.1 511,541 - B158DRAFT_2345 0.76 +6.0 511,541 - B158DRAFT_2345 0.76 +5.1 511,541 - B158DRAFT_2345 0.76 +6.4 511,593 + B158DRAFT_2345 0.79 +2.3 512,014 - B158DRAFT_2346 0.18 +6.9 512,315 + +7.3 514,077 + +5.7
Or see this region's nucleotide sequence