Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2254

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2252 and B158DRAFT_2253 overlap by 1 nucleotidesB158DRAFT_2253 and B158DRAFT_2254 are separated by 129 nucleotidesB158DRAFT_2254 and B158DRAFT_2255 are separated by 90 nucleotidesB158DRAFT_2255 and B158DRAFT_2256 are separated by 134 nucleotides B158DRAFT_2252: B158DRAFT_2252 - sodium/proline symporter, at 414,588 to 416,177 _2252 B158DRAFT_2253: B158DRAFT_2253 - Acetyltransferases, at 416,177 to 416,659 _2253 B158DRAFT_2254: B158DRAFT_2254 - formate-dependent phosphoribosylglycinamide formyltransferase (EC 6.3.4.-), at 416,789 to 417,970 _2254 B158DRAFT_2255: B158DRAFT_2255 - Molecular chaperone (small heat shock protein), at 418,061 to 418,483 _2255 B158DRAFT_2256: B158DRAFT_2256 - Universal stress protein UspA and related nucleotide-binding proteins, at 418,618 to 419,073 _2256 Position (kb) 416 417 418Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 415.868 kb on - strand, within B158DRAFT_2252at 415.875 kb on + strand, within B158DRAFT_2252at 415.880 kb on + strand, within B158DRAFT_2252at 415.880 kb on + strand, within B158DRAFT_2252at 415.888 kb on - strand, within B158DRAFT_2252at 415.907 kb on - strand, within B158DRAFT_2252at 415.940 kb on + strand, within B158DRAFT_2252at 415.940 kb on + strand, within B158DRAFT_2252at 416.000 kb on - strand, within B158DRAFT_2252at 416.005 kb on - strand, within B158DRAFT_2252at 416.008 kb on + strand, within B158DRAFT_2252at 416.008 kb on + strand, within B158DRAFT_2252at 416.008 kb on + strand, within B158DRAFT_2252at 416.016 kb on - strand, within B158DRAFT_2252at 416.016 kb on - strand, within B158DRAFT_2252at 416.021 kb on - strandat 416.070 kb on - strandat 416.070 kb on - strandat 416.070 kb on - strandat 416.070 kb on - strandat 416.070 kb on - strandat 416.070 kb on - strandat 416.295 kb on + strand, within B158DRAFT_2253at 416.300 kb on + strand, within B158DRAFT_2253at 416.378 kb on - strand, within B158DRAFT_2253at 416.491 kb on - strand, within B158DRAFT_2253at 416.516 kb on + strand, within B158DRAFT_2253at 416.540 kb on + strand, within B158DRAFT_2253at 416.540 kb on + strand, within B158DRAFT_2253at 416.540 kb on + strand, within B158DRAFT_2253at 416.545 kb on + strand, within B158DRAFT_2253at 416.586 kb on + strand, within B158DRAFT_2253at 416.594 kb on - strand, within B158DRAFT_2253at 416.653 kb on + strandat 416.719 kb on + strandat 416.740 kb on + strandat 416.847 kb on - strandat 416.862 kb on + strandat 416.862 kb on + strandat 416.877 kb on + strandat 416.884 kb on - strandat 416.892 kb on + strandat 416.894 kb on - strandat 417.087 kb on + strand, within B158DRAFT_2254at 417.134 kb on + strand, within B158DRAFT_2254at 417.158 kb on + strand, within B158DRAFT_2254at 417.199 kb on - strand, within B158DRAFT_2254at 417.221 kb on + strand, within B158DRAFT_2254at 417.221 kb on + strand, within B158DRAFT_2254at 417.221 kb on + strand, within B158DRAFT_2254at 417.221 kb on + strand, within B158DRAFT_2254at 417.229 kb on - strand, within B158DRAFT_2254at 417.229 kb on - strand, within B158DRAFT_2254at 417.233 kb on + strand, within B158DRAFT_2254at 417.256 kb on + strand, within B158DRAFT_2254at 417.272 kb on + strand, within B158DRAFT_2254at 417.278 kb on + strand, within B158DRAFT_2254at 417.289 kb on + strand, within B158DRAFT_2254at 417.350 kb on + strand, within B158DRAFT_2254at 417.350 kb on + strand, within B158DRAFT_2254at 417.350 kb on + strand, within B158DRAFT_2254at 417.350 kb on + strand, within B158DRAFT_2254at 417.356 kb on + strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.358 kb on - strand, within B158DRAFT_2254at 417.368 kb on + strand, within B158DRAFT_2254at 417.376 kb on - strand, within B158DRAFT_2254at 417.376 kb on - strand, within B158DRAFT_2254at 417.434 kb on - strand, within B158DRAFT_2254at 417.444 kb on - strand, within B158DRAFT_2254at 417.460 kb on - strand, within B158DRAFT_2254at 417.483 kb on + strand, within B158DRAFT_2254at 417.483 kb on + strand, within B158DRAFT_2254at 417.535 kb on - strand, within B158DRAFT_2254at 417.545 kb on + strand, within B158DRAFT_2254at 417.552 kb on + strand, within B158DRAFT_2254at 417.650 kb on + strand, within B158DRAFT_2254at 417.700 kb on - strand, within B158DRAFT_2254at 417.734 kb on + strand, within B158DRAFT_2254at 417.746 kb on + strand, within B158DRAFT_2254at 417.777 kb on - strand, within B158DRAFT_2254at 417.777 kb on - strand, within B158DRAFT_2254at 417.808 kb on + strand, within B158DRAFT_2254at 417.808 kb on + strand, within B158DRAFT_2254at 417.808 kb on + strand, within B158DRAFT_2254at 417.922 kb on - strandat 417.927 kb on - strandat 417.932 kb on + strandat 417.993 kb on + strandat 418.023 kb on + strandat 418.031 kb on + strandat 418.159 kb on - strand, within B158DRAFT_2255at 418.164 kb on - strand, within B158DRAFT_2255at 418.169 kb on - strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.180 kb on + strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.188 kb on - strand, within B158DRAFT_2255at 418.324 kb on + strand, within B158DRAFT_2255at 418.364 kb on + strand, within B158DRAFT_2255at 418.364 kb on + strand, within B158DRAFT_2255at 418.371 kb on + strand, within B158DRAFT_2255at 418.372 kb on - strand, within B158DRAFT_2255at 418.388 kb on + strand, within B158DRAFT_2255at 418.396 kb on + strand, within B158DRAFT_2255at 418.409 kb on + strand, within B158DRAFT_2255at 418.461 kb on + strandat 418.469 kb on - strandat 418.510 kb on - strandat 418.569 kb on + strandat 418.577 kb on - strandat 418.616 kb on - strandat 418.616 kb on - strandat 418.666 kb on + strand, within B158DRAFT_2256at 418.674 kb on - strand, within B158DRAFT_2256at 418.887 kb on + strand, within B158DRAFT_2256at 418.895 kb on - strand, within B158DRAFT_2256at 418.895 kb on - strand, within B158DRAFT_2256at 418.925 kb on + strand, within B158DRAFT_2256at 418.933 kb on - strand, within B158DRAFT_2256at 418.964 kb on + strand, within B158DRAFT_2256at 418.964 kb on + strand, within B158DRAFT_2256

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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415,868 - B158DRAFT_2252 0.81 -0.9
415,875 + B158DRAFT_2252 0.81 -1.1
415,880 + B158DRAFT_2252 0.81 -0.8
415,880 + B158DRAFT_2252 0.81 +0.6
415,888 - B158DRAFT_2252 0.82 -0.3
415,907 - B158DRAFT_2252 0.83 -0.6
415,940 + B158DRAFT_2252 0.85 -0.3
415,940 + B158DRAFT_2252 0.85 -2.0
416,000 - B158DRAFT_2252 0.89 -0.6
416,005 - B158DRAFT_2252 0.89 -0.8
416,008 + B158DRAFT_2252 0.89 -1.7
416,008 + B158DRAFT_2252 0.89 +0.7
416,008 + B158DRAFT_2252 0.89 -0.1
416,016 - B158DRAFT_2252 0.90 -0.8
416,016 - B158DRAFT_2252 0.90 -0.0
416,021 - -1.0
416,070 - -1.0
416,070 - -1.7
416,070 - -2.0
416,070 - -0.6
416,070 - -1.6
416,070 - -2.4
416,295 + B158DRAFT_2253 0.24 -1.4
416,300 + B158DRAFT_2253 0.25 -1.9
416,378 - B158DRAFT_2253 0.42 -1.6
416,491 - B158DRAFT_2253 0.65 -1.7
416,516 + B158DRAFT_2253 0.70 +0.7
416,540 + B158DRAFT_2253 0.75 -0.6
416,540 + B158DRAFT_2253 0.75 -1.0
416,540 + B158DRAFT_2253 0.75 +1.4
416,545 + B158DRAFT_2253 0.76 -0.1
416,586 + B158DRAFT_2253 0.85 -1.3
416,594 - B158DRAFT_2253 0.86 -1.5
416,653 + +0.8
416,719 + -2.2
416,740 + +0.3
416,847 - +0.8
416,862 + +0.3
416,862 + -1.8
416,877 + +0.9
416,884 - -1.1
416,892 + -0.6
416,894 - +0.1
417,087 + B158DRAFT_2254 0.25 -1.3
417,134 + B158DRAFT_2254 0.29 -1.2
417,158 + B158DRAFT_2254 0.31 +0.8
417,199 - B158DRAFT_2254 0.35 -1.3
417,221 + B158DRAFT_2254 0.37 -0.2
417,221 + B158DRAFT_2254 0.37 +1.2
417,221 + B158DRAFT_2254 0.37 -0.0
417,221 + B158DRAFT_2254 0.37 -0.9
417,229 - B158DRAFT_2254 0.37 -0.5
417,229 - B158DRAFT_2254 0.37 -0.5
417,233 + B158DRAFT_2254 0.38 -1.3
417,256 + B158DRAFT_2254 0.40 +0.0
417,272 + B158DRAFT_2254 0.41 -0.8
417,278 + B158DRAFT_2254 0.41 -1.1
417,289 + B158DRAFT_2254 0.42 -1.1
417,350 + B158DRAFT_2254 0.47 -1.9
417,350 + B158DRAFT_2254 0.47 +1.7
417,350 + B158DRAFT_2254 0.47 -2.0
417,350 + B158DRAFT_2254 0.47 -2.4
417,356 + B158DRAFT_2254 0.48 -1.2
417,358 - B158DRAFT_2254 0.48 +0.6
417,358 - B158DRAFT_2254 0.48 +0.3
417,358 - B158DRAFT_2254 0.48 +0.4
417,358 - B158DRAFT_2254 0.48 -0.5
417,358 - B158DRAFT_2254 0.48 +0.4
417,358 - B158DRAFT_2254 0.48 -2.3
417,358 - B158DRAFT_2254 0.48 +4.8
417,358 - B158DRAFT_2254 0.48 -0.6
417,358 - B158DRAFT_2254 0.48 +1.5
417,368 + B158DRAFT_2254 0.49 -0.7
417,376 - B158DRAFT_2254 0.50 +0.0
417,376 - B158DRAFT_2254 0.50 -1.2
417,434 - B158DRAFT_2254 0.55 -1.4
417,444 - B158DRAFT_2254 0.55 -0.1
417,460 - B158DRAFT_2254 0.57 -0.3
417,483 + B158DRAFT_2254 0.59 +1.8
417,483 + B158DRAFT_2254 0.59 -0.3
417,535 - B158DRAFT_2254 0.63 -2.0
417,545 + B158DRAFT_2254 0.64 -0.8
417,552 + B158DRAFT_2254 0.65 -2.6
417,650 + B158DRAFT_2254 0.73 +2.7
417,700 - B158DRAFT_2254 0.77 -1.4
417,734 + B158DRAFT_2254 0.80 -1.4
417,746 + B158DRAFT_2254 0.81 -0.2
417,777 - B158DRAFT_2254 0.84 -0.9
417,777 - B158DRAFT_2254 0.84 +1.3
417,808 + B158DRAFT_2254 0.86 +1.1
417,808 + B158DRAFT_2254 0.86 -1.3
417,808 + B158DRAFT_2254 0.86 -1.5
417,922 - -0.1
417,927 - +2.3
417,932 + -0.1
417,993 + -1.1
418,023 + +0.9
418,031 + -0.6
418,159 - B158DRAFT_2255 0.23 -1.7
418,164 - B158DRAFT_2255 0.24 -1.2
418,169 - B158DRAFT_2255 0.26 -0.7
418,180 + B158DRAFT_2255 0.28 +0.3
418,180 + B158DRAFT_2255 0.28 -1.1
418,180 + B158DRAFT_2255 0.28 -0.7
418,180 + B158DRAFT_2255 0.28 -0.4
418,180 + B158DRAFT_2255 0.28 -0.6
418,180 + B158DRAFT_2255 0.28 -0.9
418,180 + B158DRAFT_2255 0.28 +1.7
418,180 + B158DRAFT_2255 0.28 -1.4
418,180 + B158DRAFT_2255 0.28 -0.7
418,180 + B158DRAFT_2255 0.28 -0.2
418,180 + B158DRAFT_2255 0.28 -1.0
418,180 + B158DRAFT_2255 0.28 -0.5
418,180 + B158DRAFT_2255 0.28 +0.3
418,180 + B158DRAFT_2255 0.28 -0.8
418,188 - B158DRAFT_2255 0.30 -0.8
418,188 - B158DRAFT_2255 0.30 -0.7
418,188 - B158DRAFT_2255 0.30 -2.0
418,188 - B158DRAFT_2255 0.30 -1.0
418,188 - B158DRAFT_2255 0.30 -1.3
418,188 - B158DRAFT_2255 0.30 +0.9
418,188 - B158DRAFT_2255 0.30 -1.0
418,188 - B158DRAFT_2255 0.30 -0.3
418,188 - B158DRAFT_2255 0.30 -0.3
418,188 - B158DRAFT_2255 0.30 -1.3
418,188 - B158DRAFT_2255 0.30 -1.8
418,188 - B158DRAFT_2255 0.30 -1.7
418,188 - B158DRAFT_2255 0.30 -1.2
418,188 - B158DRAFT_2255 0.30 -0.4
418,188 - B158DRAFT_2255 0.30 -0.2
418,188 - B158DRAFT_2255 0.30 +0.8
418,188 - B158DRAFT_2255 0.30 +2.5
418,188 - B158DRAFT_2255 0.30 -0.3
418,188 - B158DRAFT_2255 0.30 +0.6
418,324 + B158DRAFT_2255 0.62 +0.6
418,364 + B158DRAFT_2255 0.72 +1.7
418,364 + B158DRAFT_2255 0.72 -0.4
418,371 + B158DRAFT_2255 0.73 +0.5
418,372 - B158DRAFT_2255 0.74 -0.3
418,388 + B158DRAFT_2255 0.77 -2.5
418,396 + B158DRAFT_2255 0.79 -0.3
418,409 + B158DRAFT_2255 0.82 -0.4
418,461 + -3.2
418,469 - -0.8
418,510 - -0.7
418,569 + +0.1
418,577 - +0.0
418,616 - -1.2
418,616 - -0.3
418,666 + B158DRAFT_2256 0.11 -0.9
418,674 - B158DRAFT_2256 0.12 -1.3
418,887 + B158DRAFT_2256 0.59 -1.3
418,895 - B158DRAFT_2256 0.61 +0.4
418,895 - B158DRAFT_2256 0.61 +0.1
418,925 + B158DRAFT_2256 0.67 -1.3
418,933 - B158DRAFT_2256 0.69 -1.0
418,964 + B158DRAFT_2256 0.76 +0.7
418,964 + B158DRAFT_2256 0.76 +0.2

Or see this region's nucleotide sequence