Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2243 and B158DRAFT_2244 are separated by 167 nucleotides B158DRAFT_2244 and B158DRAFT_2245 are separated by 358 nucleotides
B158DRAFT_2243: B158DRAFT_2243 - Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein, at 403,092 to 404,609
_2243
B158DRAFT_2244: B158DRAFT_2244 - phosphoribosylformylglycinamidine synthase, single chain form, at 404,777 to 408,673
_2244
B158DRAFT_2245: B158DRAFT_2245 - Predicted membrane protein, at 409,032 to 409,640
_2245
Position (kb) 404
405
406
407
408
409 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 403.848 kb on + strand, within B158DRAFT_2243 at 403.918 kb on + strand, within B158DRAFT_2243 at 403.929 kb on + strand, within B158DRAFT_2243 at 403.930 kb on + strand, within B158DRAFT_2243 at 403.937 kb on - strand, within B158DRAFT_2243 at 403.937 kb on - strand, within B158DRAFT_2243 at 403.937 kb on - strand, within B158DRAFT_2243 at 403.943 kb on - strand, within B158DRAFT_2243 at 403.943 kb on - strand, within B158DRAFT_2243 at 403.956 kb on - strand, within B158DRAFT_2243 at 403.976 kb on + strand, within B158DRAFT_2243 at 403.984 kb on - strand, within B158DRAFT_2243 at 404.018 kb on + strand, within B158DRAFT_2243 at 404.026 kb on - strand, within B158DRAFT_2243 at 404.051 kb on - strand, within B158DRAFT_2243 at 404.064 kb on + strand, within B158DRAFT_2243 at 404.064 kb on + strand, within B158DRAFT_2243 at 404.064 kb on + strand, within B158DRAFT_2243 at 404.064 kb on + strand, within B158DRAFT_2243 at 404.064 kb on + strand, within B158DRAFT_2243 at 404.064 kb on + strand, within B158DRAFT_2243 at 404.064 kb on + strand, within B158DRAFT_2243 at 404.064 kb on + strand, within B158DRAFT_2243 at 404.064 kb on + strand, within B158DRAFT_2243 at 404.064 kb on + strand, within B158DRAFT_2243 at 404.072 kb on - strand, within B158DRAFT_2243 at 404.072 kb on - strand, within B158DRAFT_2243 at 404.072 kb on - strand, within B158DRAFT_2243 at 404.072 kb on - strand, within B158DRAFT_2243 at 404.072 kb on - strand, within B158DRAFT_2243 at 404.072 kb on - strand, within B158DRAFT_2243 at 404.072 kb on - strand, within B158DRAFT_2243 at 404.072 kb on - strand, within B158DRAFT_2243 at 404.072 kb on - strand, within B158DRAFT_2243 at 404.072 kb on - strand, within B158DRAFT_2243 at 404.072 kb on - strand, within B158DRAFT_2243 at 404.072 kb on - strand, within B158DRAFT_2243 at 404.072 kb on - strand, within B158DRAFT_2243 at 404.072 kb on - strand, within B158DRAFT_2243 at 404.072 kb on - strand, within B158DRAFT_2243 at 404.095 kb on - strand, within B158DRAFT_2243 at 404.105 kb on - strand, within B158DRAFT_2243 at 404.132 kb on + strand, within B158DRAFT_2243 at 404.282 kb on + strand, within B158DRAFT_2243 at 404.288 kb on + strand, within B158DRAFT_2243 at 404.288 kb on + strand, within B158DRAFT_2243 at 404.289 kb on + strand, within B158DRAFT_2243 at 404.381 kb on + strand, within B158DRAFT_2243 at 404.381 kb on + strand, within B158DRAFT_2243 at 404.389 kb on - strand, within B158DRAFT_2243 at 404.436 kb on - strand, within B158DRAFT_2243 at 404.450 kb on + strand, within B158DRAFT_2243 at 404.536 kb on - strand at 404.536 kb on - strand at 404.578 kb on - strand at 404.644 kb on + strand at 408.676 kb on - strand at 408.804 kb on + strand at 408.804 kb on + strand at 408.817 kb on - strand at 408.831 kb on + strand at 408.918 kb on - strand at 408.946 kb on - strand at 408.946 kb on - strand at 408.961 kb on - strand at 409.200 kb on - strand, within B158DRAFT_2245 at 409.240 kb on + strand, within B158DRAFT_2245 at 409.241 kb on - strand, within B158DRAFT_2245 at 409.260 kb on + strand, within B158DRAFT_2245 at 409.428 kb on + strand, within B158DRAFT_2245 at 409.479 kb on - strand, within B158DRAFT_2245 at 409.511 kb on + strand, within B158DRAFT_2245 at 409.539 kb on + strand, within B158DRAFT_2245
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 403,848 + B158DRAFT_2243 0.50 +2.3 403,918 + B158DRAFT_2243 0.54 +4.3 403,929 + B158DRAFT_2243 0.55 +2.3 403,930 + B158DRAFT_2243 0.55 +1.0 403,937 - B158DRAFT_2243 0.56 +2.7 403,937 - B158DRAFT_2243 0.56 +2.3 403,937 - B158DRAFT_2243 0.56 +2.7 403,943 - B158DRAFT_2243 0.56 +4.3 403,943 - B158DRAFT_2243 0.56 +3.3 403,956 - B158DRAFT_2243 0.57 +2.7 403,976 + B158DRAFT_2243 0.58 +0.6 403,984 - B158DRAFT_2243 0.59 +1.1 404,018 + B158DRAFT_2243 0.61 +0.5 404,026 - B158DRAFT_2243 0.62 +2.7 404,051 - B158DRAFT_2243 0.63 +2.0 404,064 + B158DRAFT_2243 0.64 +4.3 404,064 + B158DRAFT_2243 0.64 +1.0 404,064 + B158DRAFT_2243 0.64 +2.3 404,064 + B158DRAFT_2243 0.64 +0.1 404,064 + B158DRAFT_2243 0.64 -1.0 404,064 + B158DRAFT_2243 0.64 +3.3 404,064 + B158DRAFT_2243 0.64 +2.7 404,064 + B158DRAFT_2243 0.64 +3.3 404,064 + B158DRAFT_2243 0.64 +0.3 404,064 + B158DRAFT_2243 0.64 +2.3 404,072 - B158DRAFT_2243 0.65 +1.1 404,072 - B158DRAFT_2243 0.65 +1.3 404,072 - B158DRAFT_2243 0.65 +2.0 404,072 - B158DRAFT_2243 0.65 -0.6 404,072 - B158DRAFT_2243 0.65 +1.3 404,072 - B158DRAFT_2243 0.65 +3.0 404,072 - B158DRAFT_2243 0.65 +2.7 404,072 - B158DRAFT_2243 0.65 -1.2 404,072 - B158DRAFT_2243 0.65 +0.6 404,072 - B158DRAFT_2243 0.65 +0.3 404,072 - B158DRAFT_2243 0.65 +3.3 404,072 - B158DRAFT_2243 0.65 +2.0 404,072 - B158DRAFT_2243 0.65 +3.3 404,072 - B158DRAFT_2243 0.65 -0.3 404,072 - B158DRAFT_2243 0.65 +4.3 404,095 - B158DRAFT_2243 0.66 +4.3 404,105 - B158DRAFT_2243 0.67 +0.7 404,132 + B158DRAFT_2243 0.69 +2.3 404,282 + B158DRAFT_2243 0.78 +2.7 404,288 + B158DRAFT_2243 0.79 +2.3 404,288 + B158DRAFT_2243 0.79 +4.3 404,289 + B158DRAFT_2243 0.79 +2.7 404,381 + B158DRAFT_2243 0.85 +3.3 404,381 + B158DRAFT_2243 0.85 +0.8 404,389 - B158DRAFT_2243 0.85 +2.3 404,436 - B158DRAFT_2243 0.89 +2.0 404,450 + B158DRAFT_2243 0.89 +2.3 404,536 - +0.8 404,536 - +1.1 404,578 - +2.0 404,644 + +0.7 408,676 - +2.2 408,804 + -0.2 408,804 + -1.2 408,817 - +0.8 408,831 + -0.9 408,918 - -1.0 408,946 - +0.0 408,946 - -1.2 408,961 - +0.1 409,200 - B158DRAFT_2245 0.28 -0.3 409,240 + B158DRAFT_2245 0.34 -1.2 409,241 - B158DRAFT_2245 0.34 +0.5 409,260 + B158DRAFT_2245 0.37 -0.4 409,428 + B158DRAFT_2245 0.65 -0.7 409,479 - B158DRAFT_2245 0.73 -0.9 409,511 + B158DRAFT_2245 0.79 +0.4 409,539 + B158DRAFT_2245 0.83 +0.2
Or see this region's nucleotide sequence