Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1984

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1982 and B158DRAFT_1983 are separated by 45 nucleotidesB158DRAFT_1983 and B158DRAFT_1984 are separated by 162 nucleotidesB158DRAFT_1984 and B158DRAFT_1985 are separated by 285 nucleotidesB158DRAFT_1985 and B158DRAFT_1986 are separated by 52 nucleotides B158DRAFT_1982: B158DRAFT_1982 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 118,739 to 119,452 _1982 B158DRAFT_1983: B158DRAFT_1983 - Protein of unknown function (DUF1282)., at 119,498 to 120,094 _1983 B158DRAFT_1984: B158DRAFT_1984 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 120,257 to 121,018 _1984 B158DRAFT_1985: B158DRAFT_1985 - hypothetical protein, at 121,304 to 121,723 _1985 B158DRAFT_1986: B158DRAFT_1986 - hypothetical protein, at 121,776 to 122,312 _1986 Position (kb) 120 121 122Strain fitness (log2 ratio) -2 -1 0 1 2 3at 119.271 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.271 kb on + strand, within B158DRAFT_1982at 119.279 kb on - strand, within B158DRAFT_1982at 119.279 kb on - strand, within B158DRAFT_1982at 119.279 kb on - strand, within B158DRAFT_1982at 119.279 kb on - strand, within B158DRAFT_1982at 119.279 kb on - strand, within B158DRAFT_1982at 119.339 kb on - strand, within B158DRAFT_1982at 119.442 kb on - strandat 119.480 kb on + strandat 119.480 kb on + strandat 119.480 kb on + strandat 119.488 kb on + strandat 119.488 kb on - strandat 119.488 kb on - strandat 119.488 kb on - strandat 119.488 kb on - strandat 119.491 kb on - strandat 119.491 kb on - strandat 119.546 kb on - strandat 119.606 kb on + strand, within B158DRAFT_1983at 119.614 kb on - strand, within B158DRAFT_1983at 119.642 kb on + strand, within B158DRAFT_1983at 119.642 kb on + strand, within B158DRAFT_1983at 119.642 kb on + strand, within B158DRAFT_1983at 119.642 kb on + strand, within B158DRAFT_1983at 119.644 kb on + strand, within B158DRAFT_1983at 119.644 kb on + strand, within B158DRAFT_1983at 119.644 kb on + strand, within B158DRAFT_1983at 119.644 kb on + strand, within B158DRAFT_1983at 119.644 kb on + strand, within B158DRAFT_1983at 119.644 kb on + strand, within B158DRAFT_1983at 119.644 kb on + strand, within B158DRAFT_1983at 119.644 kb on + strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.650 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.652 kb on - strand, within B158DRAFT_1983at 119.691 kb on + strand, within B158DRAFT_1983at 119.785 kb on - strand, within B158DRAFT_1983at 119.887 kb on + strand, within B158DRAFT_1983at 119.892 kb on + strand, within B158DRAFT_1983at 119.895 kb on - strand, within B158DRAFT_1983at 119.895 kb on - strand, within B158DRAFT_1983at 119.897 kb on + strand, within B158DRAFT_1983at 119.897 kb on + strand, within B158DRAFT_1983at 119.905 kb on - strand, within B158DRAFT_1983at 119.915 kb on - strand, within B158DRAFT_1983at 119.918 kb on + strand, within B158DRAFT_1983at 119.997 kb on + strand, within B158DRAFT_1983at 120.009 kb on + strand, within B158DRAFT_1983at 120.015 kb on + strand, within B158DRAFT_1983at 120.033 kb on - strand, within B158DRAFT_1983at 120.048 kb on + strandat 120.080 kb on + strandat 120.080 kb on + strandat 120.088 kb on - strandat 120.088 kb on - strandat 120.088 kb on - strandat 120.149 kb on - strandat 120.153 kb on + strandat 120.153 kb on + strandat 120.161 kb on - strandat 120.161 kb on - strandat 120.161 kb on - strandat 120.161 kb on - strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.189 kb on + strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.197 kb on - strandat 120.325 kb on - strandat 120.327 kb on + strandat 120.335 kb on - strand, within B158DRAFT_1984at 120.335 kb on - strand, within B158DRAFT_1984at 120.387 kb on - strand, within B158DRAFT_1984at 120.451 kb on - strand, within B158DRAFT_1984at 120.568 kb on + strand, within B158DRAFT_1984at 120.575 kb on + strand, within B158DRAFT_1984at 120.577 kb on - strand, within B158DRAFT_1984at 120.706 kb on + strand, within B158DRAFT_1984at 120.706 kb on + strand, within B158DRAFT_1984at 120.706 kb on + strand, within B158DRAFT_1984at 120.714 kb on - strand, within B158DRAFT_1984at 120.714 kb on - strand, within B158DRAFT_1984at 120.730 kb on + strand, within B158DRAFT_1984at 120.730 kb on + strand, within B158DRAFT_1984at 120.730 kb on + strand, within B158DRAFT_1984at 120.730 kb on + strand, within B158DRAFT_1984at 120.738 kb on - strand, within B158DRAFT_1984at 120.738 kb on - strand, within B158DRAFT_1984at 120.738 kb on - strand, within B158DRAFT_1984at 120.748 kb on - strand, within B158DRAFT_1984at 120.796 kb on - strand, within B158DRAFT_1984at 120.811 kb on + strand, within B158DRAFT_1984at 120.867 kb on + strand, within B158DRAFT_1984at 121.012 kb on + strandat 121.077 kb on + strandat 121.078 kb on + strandat 121.093 kb on - strandat 121.114 kb on - strandat 121.114 kb on - strandat 121.119 kb on - strandat 121.147 kb on + strandat 121.170 kb on + strandat 121.180 kb on + strandat 121.180 kb on + strandat 121.180 kb on + strandat 121.180 kb on + strandat 121.180 kb on + strandat 121.180 kb on + strandat 121.180 kb on + strandat 121.180 kb on + strandat 121.180 kb on + strandat 121.180 kb on + strandat 121.180 kb on + strandat 121.180 kb on + strandat 121.188 kb on - strandat 121.188 kb on - strandat 121.188 kb on - strandat 121.188 kb on - strandat 121.188 kb on - strandat 121.188 kb on - strandat 121.188 kb on - strandat 121.188 kb on - strandat 121.302 kb on - strandat 121.302 kb on - strandat 121.310 kb on + strandat 121.519 kb on - strand, within B158DRAFT_1985at 121.596 kb on + strand, within B158DRAFT_1985at 121.618 kb on + strand, within B158DRAFT_1985at 121.618 kb on + strand, within B158DRAFT_1985at 121.618 kb on + strand, within B158DRAFT_1985at 121.626 kb on - strand, within B158DRAFT_1985at 121.626 kb on - strand, within B158DRAFT_1985at 121.626 kb on - strand, within B158DRAFT_1985at 121.626 kb on - strand, within B158DRAFT_1985at 121.626 kb on - strand, within B158DRAFT_1985at 121.626 kb on - strand, within B158DRAFT_1985at 121.626 kb on - strand, within B158DRAFT_1985at 121.626 kb on - strand, within B158DRAFT_1985at 121.687 kb on + strandat 121.803 kb on + strandat 121.938 kb on - strand, within B158DRAFT_1986at 121.998 kb on + strand, within B158DRAFT_1986at 121.998 kb on + strand, within B158DRAFT_1986at 121.998 kb on - strand, within B158DRAFT_1986at 121.999 kb on - strand, within B158DRAFT_1986at 122.006 kb on - strand, within B158DRAFT_1986at 122.014 kb on - strand, within B158DRAFT_1986

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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119,271 + B158DRAFT_1982 0.75 -0.4
119,271 + B158DRAFT_1982 0.75 +0.1
119,271 + B158DRAFT_1982 0.75 +0.2
119,271 + B158DRAFT_1982 0.75 -0.3
119,271 + B158DRAFT_1982 0.75 +1.0
119,271 + B158DRAFT_1982 0.75 +0.0
119,271 + B158DRAFT_1982 0.75 -0.2
119,271 + B158DRAFT_1982 0.75 -0.2
119,271 + B158DRAFT_1982 0.75 -0.3
119,279 - B158DRAFT_1982 0.76 +1.9
119,279 - B158DRAFT_1982 0.76 +0.8
119,279 - B158DRAFT_1982 0.76 -0.0
119,279 - B158DRAFT_1982 0.76 +0.4
119,279 - B158DRAFT_1982 0.76 -0.9
119,339 - B158DRAFT_1982 0.84 +0.8
119,442 - -0.4
119,480 + +0.4
119,480 + +0.1
119,480 + +1.1
119,488 + -0.0
119,488 - -2.1
119,488 - -0.2
119,488 - +0.2
119,488 - +0.9
119,491 - -0.3
119,491 - +0.5
119,546 - +0.6
119,606 + B158DRAFT_1983 0.18 -0.4
119,614 - B158DRAFT_1983 0.19 -1.0
119,642 + B158DRAFT_1983 0.24 +0.2
119,642 + B158DRAFT_1983 0.24 +1.8
119,642 + B158DRAFT_1983 0.24 +0.2
119,642 + B158DRAFT_1983 0.24 -0.7
119,644 + B158DRAFT_1983 0.24 -0.7
119,644 + B158DRAFT_1983 0.24 +0.1
119,644 + B158DRAFT_1983 0.24 -0.4
119,644 + B158DRAFT_1983 0.24 -0.1
119,644 + B158DRAFT_1983 0.24 -0.4
119,644 + B158DRAFT_1983 0.24 -0.7
119,644 + B158DRAFT_1983 0.24 +0.8
119,644 + B158DRAFT_1983 0.24 -0.7
119,650 - B158DRAFT_1983 0.25 -0.8
119,650 - B158DRAFT_1983 0.25 +0.6
119,650 - B158DRAFT_1983 0.25 -0.1
119,650 - B158DRAFT_1983 0.25 -1.7
119,650 - B158DRAFT_1983 0.25 -0.6
119,650 - B158DRAFT_1983 0.25 -1.2
119,650 - B158DRAFT_1983 0.25 +0.4
119,650 - B158DRAFT_1983 0.25 +0.6
119,650 - B158DRAFT_1983 0.25 -0.4
119,652 - B158DRAFT_1983 0.26 +0.1
119,652 - B158DRAFT_1983 0.26 +0.2
119,652 - B158DRAFT_1983 0.26 +0.0
119,652 - B158DRAFT_1983 0.26 -0.4
119,652 - B158DRAFT_1983 0.26 -0.0
119,652 - B158DRAFT_1983 0.26 -1.4
119,652 - B158DRAFT_1983 0.26 -0.8
119,652 - B158DRAFT_1983 0.26 -2.1
119,652 - B158DRAFT_1983 0.26 -2.0
119,652 - B158DRAFT_1983 0.26 -0.7
119,691 + B158DRAFT_1983 0.32 +0.3
119,785 - B158DRAFT_1983 0.48 +0.0
119,887 + B158DRAFT_1983 0.65 -2.3
119,892 + B158DRAFT_1983 0.66 +1.5
119,895 - B158DRAFT_1983 0.66 -0.1
119,895 - B158DRAFT_1983 0.66 +0.3
119,897 + B158DRAFT_1983 0.67 -1.2
119,897 + B158DRAFT_1983 0.67 -0.1
119,905 - B158DRAFT_1983 0.68 +0.1
119,915 - B158DRAFT_1983 0.70 -0.7
119,918 + B158DRAFT_1983 0.70 -1.4
119,997 + B158DRAFT_1983 0.84 -0.8
120,009 + B158DRAFT_1983 0.86 -0.2
120,015 + B158DRAFT_1983 0.87 -0.3
120,033 - B158DRAFT_1983 0.90 -0.8
120,048 + -1.1
120,080 + -1.9
120,080 + -0.6
120,088 - -0.7
120,088 - -0.6
120,088 - -2.2
120,149 - +1.5
120,153 + -0.2
120,153 + -0.7
120,161 - +2.1
120,161 - -1.5
120,161 - +0.4
120,161 - -1.1
120,189 + +0.0
120,189 + -1.4
120,189 + +1.0
120,189 + -2.6
120,189 + +0.2
120,189 + -1.3
120,189 + +0.0
120,189 + -1.6
120,189 + -0.2
120,189 + +0.1
120,189 + -0.3
120,189 + +0.1
120,189 + +0.9
120,189 + +2.2
120,189 + -0.8
120,189 + +0.7
120,189 + +0.1
120,189 + -0.8
120,189 + +0.4
120,189 + -0.2
120,189 + +0.3
120,189 + +1.5
120,189 + -0.7
120,189 + +0.5
120,189 + -0.5
120,189 + +0.0
120,189 + -1.7
120,189 + -2.4
120,189 + -0.4
120,189 + -1.0
120,197 - +0.4
120,197 - -0.9
120,197 - -1.4
120,197 - -0.5
120,197 - -1.5
120,197 - -1.1
120,197 - +1.1
120,197 - +0.5
120,197 - -0.7
120,197 - -0.8
120,197 - -1.5
120,197 - -0.4
120,197 - +1.7
120,197 - +0.4
120,197 - -0.4
120,197 - +0.6
120,197 - +0.3
120,197 - -0.0
120,197 - -0.4
120,197 - -0.7
120,197 - -0.1
120,197 - +0.6
120,197 - -0.5
120,197 - +1.0
120,197 - +0.4
120,197 - +0.1
120,197 - -1.6
120,197 - -0.1
120,197 - -1.2
120,197 - -1.9
120,197 - +1.0
120,197 - +0.7
120,325 - +0.2
120,327 + -0.5
120,335 - B158DRAFT_1984 0.10 -0.5
120,335 - B158DRAFT_1984 0.10 +1.0
120,387 - B158DRAFT_1984 0.17 -0.4
120,451 - B158DRAFT_1984 0.25 +0.3
120,568 + B158DRAFT_1984 0.41 +0.5
120,575 + B158DRAFT_1984 0.42 +0.9
120,577 - B158DRAFT_1984 0.42 -1.5
120,706 + B158DRAFT_1984 0.59 +0.8
120,706 + B158DRAFT_1984 0.59 -0.6
120,706 + B158DRAFT_1984 0.59 -0.3
120,714 - B158DRAFT_1984 0.60 -0.4
120,714 - B158DRAFT_1984 0.60 -0.8
120,730 + B158DRAFT_1984 0.62 +1.2
120,730 + B158DRAFT_1984 0.62 -1.3
120,730 + B158DRAFT_1984 0.62 -0.0
120,730 + B158DRAFT_1984 0.62 +1.0
120,738 - B158DRAFT_1984 0.63 -0.9
120,738 - B158DRAFT_1984 0.63 -0.4
120,738 - B158DRAFT_1984 0.63 -1.5
120,748 - B158DRAFT_1984 0.64 -1.3
120,796 - B158DRAFT_1984 0.71 -1.5
120,811 + B158DRAFT_1984 0.73 -1.1
120,867 + B158DRAFT_1984 0.80 +0.5
121,012 + -1.8
121,077 + -1.1
121,078 + -0.9
121,093 - +0.2
121,114 - +1.4
121,114 - +1.8
121,119 - -1.6
121,147 + +0.1
121,170 + -1.9
121,180 + -1.1
121,180 + -1.9
121,180 + -0.9
121,180 + -0.8
121,180 + +0.3
121,180 + -1.1
121,180 + -1.0
121,180 + -2.1
121,180 + -1.6
121,180 + +3.7
121,180 + +1.0
121,180 + -1.7
121,188 - -2.1
121,188 - +0.0
121,188 - -0.3
121,188 - -0.5
121,188 - -1.3
121,188 - -0.5
121,188 - -1.3
121,188 - -1.3
121,302 - -0.9
121,302 - -1.4
121,310 + +1.0
121,519 - B158DRAFT_1985 0.51 -1.5
121,596 + B158DRAFT_1985 0.70 +0.1
121,618 + B158DRAFT_1985 0.75 +0.4
121,618 + B158DRAFT_1985 0.75 -1.9
121,618 + B158DRAFT_1985 0.75 -0.1
121,626 - B158DRAFT_1985 0.77 -0.6
121,626 - B158DRAFT_1985 0.77 +0.5
121,626 - B158DRAFT_1985 0.77 -1.4
121,626 - B158DRAFT_1985 0.77 -0.9
121,626 - B158DRAFT_1985 0.77 -0.7
121,626 - B158DRAFT_1985 0.77 -1.8
121,626 - B158DRAFT_1985 0.77 +0.7
121,626 - B158DRAFT_1985 0.77 -0.5
121,687 + -2.0
121,803 + +2.2
121,938 - B158DRAFT_1986 0.30 -0.1
121,998 + B158DRAFT_1986 0.41 -0.5
121,998 + B158DRAFT_1986 0.41 -0.7
121,998 - B158DRAFT_1986 0.41 -0.9
121,999 - B158DRAFT_1986 0.42 -0.3
122,006 - B158DRAFT_1986 0.43 -0.4
122,014 - B158DRAFT_1986 0.44 -0.5

Or see this region's nucleotide sequence