Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1854

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1853 and B158DRAFT_1854 are separated by 188 nucleotidesB158DRAFT_1854 and B158DRAFT_1855 are separated by 0 nucleotidesB158DRAFT_1855 and B158DRAFT_1856 are separated by 17 nucleotides B158DRAFT_1853: B158DRAFT_1853 - Imidazolonepropionase and related amidohydrolases, at 3,573 to 4,871 _1853 B158DRAFT_1854: B158DRAFT_1854 - UDP-N-acetylmuramate dehydrogenase (EC 1.1.1.158), at 5,060 to 6,091 _1854 B158DRAFT_1855: B158DRAFT_1855 - birA, biotin-[acetyl-CoA-carboxylase] ligase region, at 6,092 to 7,069 _1855 B158DRAFT_1856: B158DRAFT_1856 - pantothenate kinase, type III, at 7,087 to 7,935 _1856 Position (kb) 5 6 7Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4.123 kb on + strand, within B158DRAFT_1853at 4.124 kb on - strand, within B158DRAFT_1853at 4.131 kb on - strand, within B158DRAFT_1853at 4.150 kb on + strand, within B158DRAFT_1853at 4.158 kb on - strand, within B158DRAFT_1853at 4.167 kb on + strand, within B158DRAFT_1853at 4.197 kb on - strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.200 kb on + strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.208 kb on - strand, within B158DRAFT_1853at 4.267 kb on + strand, within B158DRAFT_1853at 4.280 kb on + strand, within B158DRAFT_1853at 4.280 kb on + strand, within B158DRAFT_1853at 4.280 kb on + strand, within B158DRAFT_1853at 4.280 kb on + strand, within B158DRAFT_1853at 4.280 kb on + strand, within B158DRAFT_1853at 4.280 kb on + strand, within B158DRAFT_1853at 4.280 kb on + strand, within B158DRAFT_1853at 4.280 kb on + strand, within B158DRAFT_1853at 4.288 kb on + strand, within B158DRAFT_1853at 4.288 kb on - strand, within B158DRAFT_1853at 4.288 kb on - strand, within B158DRAFT_1853at 4.288 kb on - strand, within B158DRAFT_1853at 4.288 kb on - strand, within B158DRAFT_1853at 4.288 kb on - strand, within B158DRAFT_1853at 4.288 kb on - strand, within B158DRAFT_1853at 4.290 kb on + strand, within B158DRAFT_1853at 4.290 kb on + strand, within B158DRAFT_1853at 4.298 kb on - strand, within B158DRAFT_1853at 4.298 kb on - strand, within B158DRAFT_1853at 4.298 kb on - strand, within B158DRAFT_1853at 4.298 kb on - strand, within B158DRAFT_1853at 4.298 kb on - strand, within B158DRAFT_1853at 4.298 kb on - strand, within B158DRAFT_1853at 4.298 kb on - strand, within B158DRAFT_1853at 4.321 kb on + strand, within B158DRAFT_1853at 4.323 kb on - strand, within B158DRAFT_1853at 4.323 kb on - strand, within B158DRAFT_1853at 4.342 kb on - strand, within B158DRAFT_1853at 4.355 kb on - strand, within B158DRAFT_1853at 4.363 kb on - strand, within B158DRAFT_1853at 4.409 kb on + strand, within B158DRAFT_1853at 4.409 kb on + strand, within B158DRAFT_1853at 4.414 kb on + strand, within B158DRAFT_1853at 4.414 kb on + strand, within B158DRAFT_1853at 4.414 kb on + strand, within B158DRAFT_1853at 4.417 kb on - strand, within B158DRAFT_1853at 4.417 kb on - strand, within B158DRAFT_1853at 4.422 kb on - strand, within B158DRAFT_1853at 4.422 kb on - strand, within B158DRAFT_1853at 4.422 kb on - strand, within B158DRAFT_1853at 4.422 kb on - strand, within B158DRAFT_1853at 4.424 kb on + strand, within B158DRAFT_1853at 4.427 kb on - strand, within B158DRAFT_1853at 4.485 kb on + strand, within B158DRAFT_1853at 4.548 kb on + strand, within B158DRAFT_1853at 4.548 kb on + strand, within B158DRAFT_1853at 4.556 kb on - strand, within B158DRAFT_1853at 4.584 kb on + strand, within B158DRAFT_1853at 4.593 kb on + strand, within B158DRAFT_1853at 4.641 kb on + strand, within B158DRAFT_1853at 4.670 kb on - strand, within B158DRAFT_1853at 4.709 kb on + strand, within B158DRAFT_1853at 4.709 kb on + strand, within B158DRAFT_1853at 4.709 kb on + strand, within B158DRAFT_1853at 4.709 kb on + strand, within B158DRAFT_1853at 4.717 kb on - strand, within B158DRAFT_1853at 4.717 kb on - strand, within B158DRAFT_1853at 4.719 kb on + strand, within B158DRAFT_1853at 4.730 kb on + strand, within B158DRAFT_1853at 4.731 kb on + strand, within B158DRAFT_1853at 4.731 kb on + strand, within B158DRAFT_1853at 4.739 kb on - strand, within B158DRAFT_1853at 4.774 kb on + strandat 4.782 kb on - strandat 4.806 kb on + strandat 4.813 kb on - strandat 4.814 kb on - strandat 4.825 kb on + strandat 4.825 kb on + strandat 4.845 kb on + strandat 4.853 kb on - strandat 4.853 kb on - strandat 4.853 kb on - strandat 4.853 kb on - strandat 4.853 kb on - strandat 4.853 kb on - strandat 4.863 kb on - strandat 4.873 kb on + strandat 4.881 kb on - strandat 4.932 kb on - strandat 4.937 kb on + strandat 4.937 kb on + strandat 4.937 kb on + strandat 4.945 kb on - strandat 4.945 kb on - strandat 5.015 kb on + strandat 6.125 kb on + strandat 6.125 kb on + strandat 6.125 kb on + strandat 7.040 kb on + strandat 7.068 kb on + strandat 7.075 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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4,123 + B158DRAFT_1853 0.42 +0.3
4,124 - B158DRAFT_1853 0.42 -0.7
4,131 - B158DRAFT_1853 0.43 -2.0
4,150 + B158DRAFT_1853 0.44 -1.0
4,158 - B158DRAFT_1853 0.45 +1.1
4,167 + B158DRAFT_1853 0.46 -1.0
4,197 - B158DRAFT_1853 0.48 -0.0
4,200 + B158DRAFT_1853 0.48 +0.0
4,200 + B158DRAFT_1853 0.48 -1.2
4,200 + B158DRAFT_1853 0.48 -1.5
4,200 + B158DRAFT_1853 0.48 +0.8
4,200 + B158DRAFT_1853 0.48 -0.3
4,200 + B158DRAFT_1853 0.48 -1.3
4,200 + B158DRAFT_1853 0.48 +0.1
4,200 + B158DRAFT_1853 0.48 -0.5
4,200 + B158DRAFT_1853 0.48 -0.3
4,200 + B158DRAFT_1853 0.48 +0.6
4,200 + B158DRAFT_1853 0.48 +0.2
4,200 + B158DRAFT_1853 0.48 -1.0
4,200 + B158DRAFT_1853 0.48 +0.2
4,200 + B158DRAFT_1853 0.48 -1.4
4,200 + B158DRAFT_1853 0.48 +0.8
4,200 + B158DRAFT_1853 0.48 +0.3
4,200 + B158DRAFT_1853 0.48 -2.1
4,200 + B158DRAFT_1853 0.48 -1.0
4,200 + B158DRAFT_1853 0.48 -0.6
4,200 + B158DRAFT_1853 0.48 +0.5
4,200 + B158DRAFT_1853 0.48 +1.7
4,200 + B158DRAFT_1853 0.48 -1.6
4,200 + B158DRAFT_1853 0.48 +0.4
4,200 + B158DRAFT_1853 0.48 -0.4
4,200 + B158DRAFT_1853 0.48 -0.8
4,200 + B158DRAFT_1853 0.48 +0.6
4,200 + B158DRAFT_1853 0.48 -0.4
4,200 + B158DRAFT_1853 0.48 -0.6
4,200 + B158DRAFT_1853 0.48 -0.3
4,200 + B158DRAFT_1853 0.48 -1.1
4,200 + B158DRAFT_1853 0.48 +0.2
4,200 + B158DRAFT_1853 0.48 -0.7
4,200 + B158DRAFT_1853 0.48 -1.8
4,200 + B158DRAFT_1853 0.48 -1.2
4,200 + B158DRAFT_1853 0.48 -0.2
4,200 + B158DRAFT_1853 0.48 -0.2
4,200 + B158DRAFT_1853 0.48 -1.8
4,200 + B158DRAFT_1853 0.48 -0.8
4,200 + B158DRAFT_1853 0.48 -2.2
4,208 - B158DRAFT_1853 0.49 -0.9
4,208 - B158DRAFT_1853 0.49 -2.0
4,208 - B158DRAFT_1853 0.49 -0.8
4,208 - B158DRAFT_1853 0.49 -1.6
4,208 - B158DRAFT_1853 0.49 -0.2
4,208 - B158DRAFT_1853 0.49 -0.2
4,208 - B158DRAFT_1853 0.49 -0.5
4,208 - B158DRAFT_1853 0.49 -0.4
4,208 - B158DRAFT_1853 0.49 -1.9
4,208 - B158DRAFT_1853 0.49 -1.4
4,208 - B158DRAFT_1853 0.49 -1.9
4,208 - B158DRAFT_1853 0.49 -0.8
4,208 - B158DRAFT_1853 0.49 -0.3
4,208 - B158DRAFT_1853 0.49 +0.4
4,208 - B158DRAFT_1853 0.49 +4.5
4,208 - B158DRAFT_1853 0.49 +0.7
4,208 - B158DRAFT_1853 0.49 -1.7
4,208 - B158DRAFT_1853 0.49 +0.6
4,208 - B158DRAFT_1853 0.49 +3.0
4,208 - B158DRAFT_1853 0.49 -0.7
4,208 - B158DRAFT_1853 0.49 +3.7
4,208 - B158DRAFT_1853 0.49 -0.0
4,208 - B158DRAFT_1853 0.49 -1.6
4,208 - B158DRAFT_1853 0.49 -1.5
4,208 - B158DRAFT_1853 0.49 +1.1
4,208 - B158DRAFT_1853 0.49 -0.6
4,208 - B158DRAFT_1853 0.49 -0.1
4,208 - B158DRAFT_1853 0.49 -3.2
4,208 - B158DRAFT_1853 0.49 -0.4
4,208 - B158DRAFT_1853 0.49 -0.4
4,208 - B158DRAFT_1853 0.49 -0.9
4,267 + B158DRAFT_1853 0.53 -0.4
4,280 + B158DRAFT_1853 0.54 -0.4
4,280 + B158DRAFT_1853 0.54 +0.9
4,280 + B158DRAFT_1853 0.54 -0.7
4,280 + B158DRAFT_1853 0.54 -1.1
4,280 + B158DRAFT_1853 0.54 -0.5
4,280 + B158DRAFT_1853 0.54 -1.7
4,280 + B158DRAFT_1853 0.54 -1.4
4,280 + B158DRAFT_1853 0.54 -0.2
4,288 + B158DRAFT_1853 0.55 -0.5
4,288 - B158DRAFT_1853 0.55 -0.1
4,288 - B158DRAFT_1853 0.55 -0.8
4,288 - B158DRAFT_1853 0.55 +0.8
4,288 - B158DRAFT_1853 0.55 -1.5
4,288 - B158DRAFT_1853 0.55 -0.3
4,288 - B158DRAFT_1853 0.55 -0.4
4,290 + B158DRAFT_1853 0.55 +0.4
4,290 + B158DRAFT_1853 0.55 -0.5
4,298 - B158DRAFT_1853 0.56 -0.1
4,298 - B158DRAFT_1853 0.56 -0.5
4,298 - B158DRAFT_1853 0.56 -0.1
4,298 - B158DRAFT_1853 0.56 -1.0
4,298 - B158DRAFT_1853 0.56 -2.2
4,298 - B158DRAFT_1853 0.56 +1.3
4,298 - B158DRAFT_1853 0.56 -0.5
4,321 + B158DRAFT_1853 0.58 -1.0
4,323 - B158DRAFT_1853 0.58 -0.7
4,323 - B158DRAFT_1853 0.58 +0.1
4,342 - B158DRAFT_1853 0.59 +0.1
4,355 - B158DRAFT_1853 0.60 -0.9
4,363 - B158DRAFT_1853 0.61 -0.6
4,409 + B158DRAFT_1853 0.64 +2.9
4,409 + B158DRAFT_1853 0.64 -0.8
4,414 + B158DRAFT_1853 0.65 +0.1
4,414 + B158DRAFT_1853 0.65 +0.5
4,414 + B158DRAFT_1853 0.65 -1.1
4,417 - B158DRAFT_1853 0.65 -0.8
4,417 - B158DRAFT_1853 0.65 -0.4
4,422 - B158DRAFT_1853 0.65 -0.2
4,422 - B158DRAFT_1853 0.65 -1.6
4,422 - B158DRAFT_1853 0.65 -0.2
4,422 - B158DRAFT_1853 0.65 -0.5
4,424 + B158DRAFT_1853 0.66 -1.5
4,427 - B158DRAFT_1853 0.66 -0.2
4,485 + B158DRAFT_1853 0.70 -0.4
4,548 + B158DRAFT_1853 0.75 -1.1
4,548 + B158DRAFT_1853 0.75 +1.9
4,556 - B158DRAFT_1853 0.76 +0.7
4,584 + B158DRAFT_1853 0.78 -0.8
4,593 + B158DRAFT_1853 0.79 -0.1
4,641 + B158DRAFT_1853 0.82 +0.3
4,670 - B158DRAFT_1853 0.84 +0.3
4,709 + B158DRAFT_1853 0.87 +0.4
4,709 + B158DRAFT_1853 0.87 +0.6
4,709 + B158DRAFT_1853 0.87 +0.8
4,709 + B158DRAFT_1853 0.87 -0.3
4,717 - B158DRAFT_1853 0.88 -1.0
4,717 - B158DRAFT_1853 0.88 -0.2
4,719 + B158DRAFT_1853 0.88 +0.3
4,730 + B158DRAFT_1853 0.89 -0.6
4,731 + B158DRAFT_1853 0.89 -1.9
4,731 + B158DRAFT_1853 0.89 -0.3
4,739 - B158DRAFT_1853 0.90 +0.4
4,774 + -0.6
4,782 - +3.4
4,806 + -1.5
4,813 - +2.9
4,814 - +0.9
4,825 + -1.5
4,825 + -1.3
4,845 + -0.6
4,853 - +0.4
4,853 - -0.8
4,853 - +2.6
4,853 - +1.3
4,853 - +0.3
4,853 - -1.3
4,863 - -1.5
4,873 + -0.5
4,881 - -0.1
4,932 - -1.1
4,937 + -2.2
4,937 + -0.2
4,937 + -1.5
4,945 - -1.5
4,945 - -0.1
5,015 + -1.0
6,125 + -0.5
6,125 + -1.1
6,125 + -0.9
7,040 + +0.9
7,068 + -0.7
7,075 + -0.8

Or see this region's nucleotide sequence