Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1457 and B158DRAFT_1458 are separated by 198 nucleotides B158DRAFT_1458 and B158DRAFT_1459 are separated by 59 nucleotides B158DRAFT_1459 and B158DRAFT_1460 are separated by 21 nucleotides B158DRAFT_1460 and B158DRAFT_1461 are separated by 44 nucleotides B158DRAFT_1461 and B158DRAFT_1462 are separated by 63 nucleotides
B158DRAFT_1457: B158DRAFT_1457 - serine O-acetyltransferase, at 1,511,502 to 1,512,296
_1457
B158DRAFT_1458: B158DRAFT_1458 - transcriptional regulator, BadM/Rrf2 family, at 1,512,495 to 1,512,962
_1458
B158DRAFT_1459: B158DRAFT_1459 - cysteine desulfurase IscS, at 1,513,022 to 1,514,236
_1459
B158DRAFT_1460: B158DRAFT_1460 - FeS cluster assembly scaffold IscU, at 1,514,258 to 1,514,641
_1460
B158DRAFT_1461: B158DRAFT_1461 - Iron-binding apoprotein IscA, at 1,514,686 to 1,515,009
_1461
B158DRAFT_1462: B158DRAFT_1462 - Fe-S protein assembly co-chaperone HscB, at 1,515,073 to 1,515,606
_1462
Position (kb)
1513
1514
1515 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1512.042 kb on + strand, within B158DRAFT_1457 at 1512.050 kb on + strand, within B158DRAFT_1457 at 1512.163 kb on + strand, within B158DRAFT_1457 at 1512.163 kb on + strand, within B158DRAFT_1457 at 1512.163 kb on + strand, within B158DRAFT_1457 at 1512.163 kb on + strand, within B158DRAFT_1457 at 1512.163 kb on + strand, within B158DRAFT_1457 at 1512.163 kb on + strand, within B158DRAFT_1457 at 1512.171 kb on - strand, within B158DRAFT_1457 at 1512.171 kb on - strand, within B158DRAFT_1457 at 1512.171 kb on - strand, within B158DRAFT_1457 at 1512.171 kb on - strand, within B158DRAFT_1457 at 1512.171 kb on - strand, within B158DRAFT_1457 at 1512.171 kb on - strand, within B158DRAFT_1457 at 1512.171 kb on - strand, within B158DRAFT_1457 at 1512.243 kb on - strand at 1512.248 kb on - strand at 1512.249 kb on + strand at 1512.258 kb on - strand at 1512.258 kb on - strand at 1512.258 kb on - strand at 1512.400 kb on + strand at 1512.422 kb on + strand at 1512.430 kb on - strand at 1512.546 kb on + strand, within B158DRAFT_1458 at 1512.546 kb on + strand, within B158DRAFT_1458 at 1512.546 kb on + strand, within B158DRAFT_1458 at 1512.546 kb on + strand, within B158DRAFT_1458 at 1512.546 kb on + strand, within B158DRAFT_1458
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 1,512,042 + B158DRAFT_1457 0.68 -0.3 1,512,050 + B158DRAFT_1457 0.69 -1.1 1,512,163 + B158DRAFT_1457 0.83 +1.6 1,512,163 + B158DRAFT_1457 0.83 +2.6 1,512,163 + B158DRAFT_1457 0.83 -0.6 1,512,163 + B158DRAFT_1457 0.83 +0.7 1,512,163 + B158DRAFT_1457 0.83 -0.1 1,512,163 + B158DRAFT_1457 0.83 +0.6 1,512,171 - B158DRAFT_1457 0.84 +2.6 1,512,171 - B158DRAFT_1457 0.84 -2.2 1,512,171 - B158DRAFT_1457 0.84 +0.3 1,512,171 - B158DRAFT_1457 0.84 +0.2 1,512,171 - B158DRAFT_1457 0.84 +0.4 1,512,171 - B158DRAFT_1457 0.84 +0.5 1,512,171 - B158DRAFT_1457 0.84 -0.3 1,512,243 - -0.3 1,512,248 - -1.5 1,512,249 + -1.0 1,512,258 - -1.2 1,512,258 - +1.3 1,512,258 - -0.3 1,512,400 + +1.1 1,512,422 + -0.7 1,512,430 - -0.4 1,512,546 + B158DRAFT_1458 0.11 +3.2 1,512,546 + B158DRAFT_1458 0.11 +0.7 1,512,546 + B158DRAFT_1458 0.11 +0.6 1,512,546 + B158DRAFT_1458 0.11 +1.4 1,512,546 + B158DRAFT_1458 0.11 +1.8
Or see this region's nucleotide sequence