Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1436

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1435 and B158DRAFT_1436 are separated by 119 nucleotidesB158DRAFT_1436 and B158DRAFT_1437 are separated by 91 nucleotides B158DRAFT_1435: B158DRAFT_1435 - N-formylglutamate amidohydrolase, at 1,486,571 to 1,487,779 _1435 B158DRAFT_1436: B158DRAFT_1436 - azurin, at 1,487,899 to 1,488,324 _1436 B158DRAFT_1437: B158DRAFT_1437 - imidazolonepropionase (EC 3.5.2.7), at 1,488,416 to 1,489,645 _1437 Position (kb) 1487 1488 1489Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1486.919 kb on - strand, within B158DRAFT_1435at 1486.955 kb on + strand, within B158DRAFT_1435at 1486.955 kb on + strand, within B158DRAFT_1435at 1486.959 kb on - strand, within B158DRAFT_1435at 1486.963 kb on - strand, within B158DRAFT_1435at 1486.990 kb on + strand, within B158DRAFT_1435at 1487.059 kb on + strand, within B158DRAFT_1435at 1487.091 kb on + strand, within B158DRAFT_1435at 1487.114 kb on + strand, within B158DRAFT_1435at 1487.118 kb on - strand, within B158DRAFT_1435at 1487.168 kb on + strand, within B158DRAFT_1435at 1487.215 kb on + strand, within B158DRAFT_1435at 1487.223 kb on - strand, within B158DRAFT_1435at 1487.242 kb on - strand, within B158DRAFT_1435at 1487.242 kb on - strand, within B158DRAFT_1435at 1487.253 kb on + strand, within B158DRAFT_1435at 1487.258 kb on + strand, within B158DRAFT_1435at 1487.261 kb on - strand, within B158DRAFT_1435at 1487.266 kb on - strand, within B158DRAFT_1435at 1487.268 kb on - strand, within B158DRAFT_1435at 1487.299 kb on - strand, within B158DRAFT_1435at 1487.303 kb on + strand, within B158DRAFT_1435at 1487.303 kb on + strand, within B158DRAFT_1435at 1487.311 kb on - strand, within B158DRAFT_1435at 1487.311 kb on - strand, within B158DRAFT_1435at 1487.311 kb on - strand, within B158DRAFT_1435at 1487.311 kb on - strand, within B158DRAFT_1435at 1487.311 kb on - strand, within B158DRAFT_1435at 1487.449 kb on - strand, within B158DRAFT_1435at 1487.516 kb on - strand, within B158DRAFT_1435at 1487.528 kb on - strand, within B158DRAFT_1435at 1487.587 kb on + strand, within B158DRAFT_1435at 1487.587 kb on + strand, within B158DRAFT_1435at 1487.587 kb on + strand, within B158DRAFT_1435at 1487.595 kb on - strand, within B158DRAFT_1435at 1487.595 kb on - strand, within B158DRAFT_1435at 1487.611 kb on + strand, within B158DRAFT_1435at 1487.611 kb on + strand, within B158DRAFT_1435at 1487.611 kb on + strand, within B158DRAFT_1435at 1487.619 kb on - strand, within B158DRAFT_1435at 1487.619 kb on - strand, within B158DRAFT_1435at 1487.619 kb on - strand, within B158DRAFT_1435at 1487.619 kb on - strand, within B158DRAFT_1435at 1487.629 kb on - strand, within B158DRAFT_1435at 1487.629 kb on - strand, within B158DRAFT_1435at 1487.635 kb on + strand, within B158DRAFT_1435at 1487.635 kb on + strand, within B158DRAFT_1435at 1487.635 kb on + strand, within B158DRAFT_1435at 1487.635 kb on + strand, within B158DRAFT_1435at 1487.635 kb on + strand, within B158DRAFT_1435at 1487.643 kb on - strand, within B158DRAFT_1435at 1487.643 kb on - strand, within B158DRAFT_1435at 1487.643 kb on - strand, within B158DRAFT_1435at 1487.643 kb on - strand, within B158DRAFT_1435at 1487.643 kb on - strand, within B158DRAFT_1435at 1487.855 kb on - strandat 1487.883 kb on + strandat 1487.891 kb on - strandat 1487.891 kb on - strandat 1487.891 kb on - strandat 1488.055 kb on + strand, within B158DRAFT_1436at 1488.079 kb on + strand, within B158DRAFT_1436at 1488.079 kb on + strand, within B158DRAFT_1436at 1488.079 kb on + strand, within B158DRAFT_1436at 1488.087 kb on - strand, within B158DRAFT_1436at 1488.087 kb on - strand, within B158DRAFT_1436at 1488.087 kb on - strand, within B158DRAFT_1436at 1488.087 kb on - strand, within B158DRAFT_1436at 1488.105 kb on + strand, within B158DRAFT_1436at 1488.113 kb on - strand, within B158DRAFT_1436at 1488.113 kb on - strand, within B158DRAFT_1436at 1488.115 kb on + strand, within B158DRAFT_1436at 1488.115 kb on + strand, within B158DRAFT_1436at 1488.144 kb on + strand, within B158DRAFT_1436at 1488.172 kb on + strand, within B158DRAFT_1436at 1488.174 kb on - strand, within B158DRAFT_1436at 1488.180 kb on - strand, within B158DRAFT_1436at 1488.233 kb on + strand, within B158DRAFT_1436at 1488.381 kb on - strandat 1488.404 kb on + strandat 1488.413 kb on + strandat 1488.413 kb on + strandat 1488.421 kb on - strandat 1488.421 kb on - strandat 1488.517 kb on + strandat 1488.517 kb on + strandat 1488.517 kb on + strandat 1488.525 kb on - strandat 1488.525 kb on - strandat 1488.525 kb on - strandat 1488.525 kb on - strandat 1488.561 kb on + strand, within B158DRAFT_1437at 1488.569 kb on - strand, within B158DRAFT_1437at 1488.621 kb on + strand, within B158DRAFT_1437at 1488.759 kb on + strand, within B158DRAFT_1437at 1488.759 kb on + strand, within B158DRAFT_1437at 1488.862 kb on + strand, within B158DRAFT_1437at 1488.863 kb on + strand, within B158DRAFT_1437at 1488.867 kb on + strand, within B158DRAFT_1437at 1488.875 kb on - strand, within B158DRAFT_1437at 1488.899 kb on + strand, within B158DRAFT_1437at 1488.912 kb on + strand, within B158DRAFT_1437at 1488.921 kb on - strand, within B158DRAFT_1437at 1488.930 kb on - strand, within B158DRAFT_1437at 1488.952 kb on + strand, within B158DRAFT_1437at 1488.952 kb on + strand, within B158DRAFT_1437at 1489.001 kb on - strand, within B158DRAFT_1437at 1489.001 kb on - strand, within B158DRAFT_1437at 1489.027 kb on - strand, within B158DRAFT_1437at 1489.085 kb on - strand, within B158DRAFT_1437at 1489.093 kb on - strand, within B158DRAFT_1437at 1489.181 kb on + strand, within B158DRAFT_1437at 1489.222 kb on - strand, within B158DRAFT_1437at 1489.286 kb on - strand, within B158DRAFT_1437at 1489.288 kb on + strand, within B158DRAFT_1437at 1489.288 kb on + strand, within B158DRAFT_1437at 1489.296 kb on - strand, within B158DRAFT_1437at 1489.296 kb on - strand, within B158DRAFT_1437at 1489.296 kb on - strand, within B158DRAFT_1437at 1489.296 kb on - strand, within B158DRAFT_1437at 1489.313 kb on + strand, within B158DRAFT_1437at 1489.313 kb on + strand, within B158DRAFT_1437

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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1,486,919 - B158DRAFT_1435 0.29 -1.2
1,486,955 + B158DRAFT_1435 0.32 -2.2
1,486,955 + B158DRAFT_1435 0.32 -0.9
1,486,959 - B158DRAFT_1435 0.32 +0.0
1,486,963 - B158DRAFT_1435 0.32 +0.5
1,486,990 + B158DRAFT_1435 0.35 -2.4
1,487,059 + B158DRAFT_1435 0.40 -0.3
1,487,091 + B158DRAFT_1435 0.43 -1.6
1,487,114 + B158DRAFT_1435 0.45 +0.5
1,487,118 - B158DRAFT_1435 0.45 +0.4
1,487,168 + B158DRAFT_1435 0.49 -2.3
1,487,215 + B158DRAFT_1435 0.53 -0.7
1,487,223 - B158DRAFT_1435 0.54 -1.0
1,487,242 - B158DRAFT_1435 0.56 -2.2
1,487,242 - B158DRAFT_1435 0.56 -0.5
1,487,253 + B158DRAFT_1435 0.56 -0.5
1,487,258 + B158DRAFT_1435 0.57 +1.8
1,487,261 - B158DRAFT_1435 0.57 +0.5
1,487,266 - B158DRAFT_1435 0.57 -0.8
1,487,268 - B158DRAFT_1435 0.58 -1.3
1,487,299 - B158DRAFT_1435 0.60 -2.8
1,487,303 + B158DRAFT_1435 0.61 -1.4
1,487,303 + B158DRAFT_1435 0.61 -1.9
1,487,311 - B158DRAFT_1435 0.61 -1.8
1,487,311 - B158DRAFT_1435 0.61 -1.7
1,487,311 - B158DRAFT_1435 0.61 +1.2
1,487,311 - B158DRAFT_1435 0.61 -0.2
1,487,311 - B158DRAFT_1435 0.61 -1.2
1,487,449 - B158DRAFT_1435 0.73 -1.8
1,487,516 - B158DRAFT_1435 0.78 +0.9
1,487,528 - B158DRAFT_1435 0.79 -1.1
1,487,587 + B158DRAFT_1435 0.84 -1.9
1,487,587 + B158DRAFT_1435 0.84 -0.7
1,487,587 + B158DRAFT_1435 0.84 -1.9
1,487,595 - B158DRAFT_1435 0.85 -2.5
1,487,595 - B158DRAFT_1435 0.85 +0.9
1,487,611 + B158DRAFT_1435 0.86 -2.1
1,487,611 + B158DRAFT_1435 0.86 -1.6
1,487,611 + B158DRAFT_1435 0.86 -2.8
1,487,619 - B158DRAFT_1435 0.87 -1.0
1,487,619 - B158DRAFT_1435 0.87 -1.0
1,487,619 - B158DRAFT_1435 0.87 +0.3
1,487,619 - B158DRAFT_1435 0.87 -0.5
1,487,629 - B158DRAFT_1435 0.88 +0.3
1,487,629 - B158DRAFT_1435 0.88 -1.6
1,487,635 + B158DRAFT_1435 0.88 -0.0
1,487,635 + B158DRAFT_1435 0.88 -0.8
1,487,635 + B158DRAFT_1435 0.88 +0.0
1,487,635 + B158DRAFT_1435 0.88 -1.1
1,487,635 + B158DRAFT_1435 0.88 -0.2
1,487,643 - B158DRAFT_1435 0.89 -0.6
1,487,643 - B158DRAFT_1435 0.89 +0.4
1,487,643 - B158DRAFT_1435 0.89 -0.5
1,487,643 - B158DRAFT_1435 0.89 -1.5
1,487,643 - B158DRAFT_1435 0.89 -0.9
1,487,855 - -0.2
1,487,883 + -1.7
1,487,891 - -1.4
1,487,891 - +1.0
1,487,891 - +0.3
1,488,055 + B158DRAFT_1436 0.37 -0.3
1,488,079 + B158DRAFT_1436 0.42 -1.3
1,488,079 + B158DRAFT_1436 0.42 -0.1
1,488,079 + B158DRAFT_1436 0.42 -0.8
1,488,087 - B158DRAFT_1436 0.44 -1.0
1,488,087 - B158DRAFT_1436 0.44 +0.8
1,488,087 - B158DRAFT_1436 0.44 +0.3
1,488,087 - B158DRAFT_1436 0.44 +3.4
1,488,105 + B158DRAFT_1436 0.48 -0.3
1,488,113 - B158DRAFT_1436 0.50 -1.9
1,488,113 - B158DRAFT_1436 0.50 -0.8
1,488,115 + B158DRAFT_1436 0.51 +0.6
1,488,115 + B158DRAFT_1436 0.51 +0.6
1,488,144 + B158DRAFT_1436 0.58 -1.2
1,488,172 + B158DRAFT_1436 0.64 +1.6
1,488,174 - B158DRAFT_1436 0.65 +0.7
1,488,180 - B158DRAFT_1436 0.66 -0.2
1,488,233 + B158DRAFT_1436 0.78 -0.2
1,488,381 - -1.3
1,488,404 + +1.7
1,488,413 + +0.6
1,488,413 + -1.0
1,488,421 - +1.4
1,488,421 - +1.2
1,488,517 + -0.3
1,488,517 + -0.2
1,488,517 + +0.6
1,488,525 - -1.2
1,488,525 - -2.7
1,488,525 - +1.5
1,488,525 - -0.3
1,488,561 + B158DRAFT_1437 0.12 -1.4
1,488,569 - B158DRAFT_1437 0.12 -0.8
1,488,621 + B158DRAFT_1437 0.17 -1.5
1,488,759 + B158DRAFT_1437 0.28 -1.5
1,488,759 + B158DRAFT_1437 0.28 -1.1
1,488,862 + B158DRAFT_1437 0.36 -0.8
1,488,863 + B158DRAFT_1437 0.36 -1.6
1,488,867 + B158DRAFT_1437 0.37 -0.1
1,488,875 - B158DRAFT_1437 0.37 +1.6
1,488,899 + B158DRAFT_1437 0.39 +0.5
1,488,912 + B158DRAFT_1437 0.40 +0.9
1,488,921 - B158DRAFT_1437 0.41 -0.8
1,488,930 - B158DRAFT_1437 0.42 +1.2
1,488,952 + B158DRAFT_1437 0.44 -1.7
1,488,952 + B158DRAFT_1437 0.44 +1.1
1,489,001 - B158DRAFT_1437 0.48 -0.6
1,489,001 - B158DRAFT_1437 0.48 -1.4
1,489,027 - B158DRAFT_1437 0.50 -1.8
1,489,085 - B158DRAFT_1437 0.54 -1.0
1,489,093 - B158DRAFT_1437 0.55 -0.2
1,489,181 + B158DRAFT_1437 0.62 -0.3
1,489,222 - B158DRAFT_1437 0.66 -1.1
1,489,286 - B158DRAFT_1437 0.71 -1.0
1,489,288 + B158DRAFT_1437 0.71 +0.1
1,489,288 + B158DRAFT_1437 0.71 -0.7
1,489,296 - B158DRAFT_1437 0.72 +0.2
1,489,296 - B158DRAFT_1437 0.72 -0.0
1,489,296 - B158DRAFT_1437 0.72 -1.6
1,489,296 - B158DRAFT_1437 0.72 -0.6
1,489,313 + B158DRAFT_1437 0.73 +0.5
1,489,313 + B158DRAFT_1437 0.73 -0.0

Or see this region's nucleotide sequence