Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0940 and B158DRAFT_0941 are separated by 8 nucleotides B158DRAFT_0941 and B158DRAFT_0942 are separated by 97 nucleotides
B158DRAFT_0940: B158DRAFT_0940 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase, at 967,792 to 968,916
_0940
B158DRAFT_0941: B158DRAFT_0941 - S-formylglutathione hydrolase, at 968,925 to 969,761
_0941
B158DRAFT_0942: B158DRAFT_0942 - Nitric oxide reductase large subunit, at 969,859 to 972,138
_0942
Position (kb) 968
969
970 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 967.931 kb on - strand, within B158DRAFT_0940 at 967.931 kb on - strand, within B158DRAFT_0940 at 967.944 kb on - strand, within B158DRAFT_0940 at 968.026 kb on + strand, within B158DRAFT_0940 at 968.026 kb on + strand, within B158DRAFT_0940 at 968.034 kb on - strand, within B158DRAFT_0940 at 968.034 kb on - strand, within B158DRAFT_0940 at 968.036 kb on + strand, within B158DRAFT_0940 at 968.036 kb on + strand, within B158DRAFT_0940 at 968.044 kb on - strand, within B158DRAFT_0940 at 968.044 kb on - strand, within B158DRAFT_0940 at 968.044 kb on - strand, within B158DRAFT_0940 at 968.080 kb on - strand, within B158DRAFT_0940 at 968.176 kb on - strand, within B158DRAFT_0940 at 968.216 kb on - strand, within B158DRAFT_0940 at 968.317 kb on - strand, within B158DRAFT_0940 at 968.338 kb on + strand, within B158DRAFT_0940 at 968.340 kb on + strand, within B158DRAFT_0940 at 968.346 kb on - strand, within B158DRAFT_0940 at 968.346 kb on - strand, within B158DRAFT_0940 at 968.346 kb on - strand, within B158DRAFT_0940 at 968.396 kb on + strand, within B158DRAFT_0940 at 968.396 kb on + strand, within B158DRAFT_0940 at 968.396 kb on + strand, within B158DRAFT_0940 at 968.396 kb on + strand, within B158DRAFT_0940 at 968.396 kb on + strand, within B158DRAFT_0940 at 968.396 kb on + strand, within B158DRAFT_0940 at 968.396 kb on + strand, within B158DRAFT_0940 at 968.396 kb on + strand, within B158DRAFT_0940 at 968.396 kb on + strand, within B158DRAFT_0940 at 968.398 kb on + strand, within B158DRAFT_0940 at 968.404 kb on - strand, within B158DRAFT_0940 at 968.404 kb on - strand, within B158DRAFT_0940 at 968.404 kb on - strand, within B158DRAFT_0940 at 968.404 kb on - strand, within B158DRAFT_0940 at 968.404 kb on - strand, within B158DRAFT_0940 at 968.404 kb on - strand, within B158DRAFT_0940 at 968.404 kb on - strand, within B158DRAFT_0940 at 968.404 kb on - strand, within B158DRAFT_0940 at 968.404 kb on - strand, within B158DRAFT_0940 at 968.404 kb on - strand, within B158DRAFT_0940 at 968.404 kb on - strand, within B158DRAFT_0940 at 968.404 kb on - strand, within B158DRAFT_0940 at 968.459 kb on + strand, within B158DRAFT_0940 at 968.612 kb on - strand, within B158DRAFT_0940 at 968.623 kb on + strand, within B158DRAFT_0940 at 968.631 kb on - strand, within B158DRAFT_0940 at 968.631 kb on - strand, within B158DRAFT_0940 at 968.631 kb on - strand, within B158DRAFT_0940 at 968.652 kb on - strand, within B158DRAFT_0940 at 968.765 kb on + strand, within B158DRAFT_0940 at 968.770 kb on + strand, within B158DRAFT_0940 at 968.773 kb on - strand, within B158DRAFT_0940 at 968.831 kb on - strand at 968.884 kb on + strand at 968.923 kb on + strand at 969.089 kb on + strand, within B158DRAFT_0941 at 969.089 kb on + strand, within B158DRAFT_0941 at 969.089 kb on + strand, within B158DRAFT_0941 at 969.089 kb on + strand, within B158DRAFT_0941 at 969.097 kb on - strand, within B158DRAFT_0941 at 969.097 kb on - strand, within B158DRAFT_0941 at 969.097 kb on - strand, within B158DRAFT_0941 at 969.119 kb on + strand, within B158DRAFT_0941 at 969.152 kb on - strand, within B158DRAFT_0941 at 969.221 kb on + strand, within B158DRAFT_0941 at 969.371 kb on - strand, within B158DRAFT_0941 at 969.507 kb on - strand, within B158DRAFT_0941 at 969.507 kb on - strand, within B158DRAFT_0941 at 969.522 kb on + strand, within B158DRAFT_0941 at 969.530 kb on - strand, within B158DRAFT_0941 at 969.607 kb on - strand, within B158DRAFT_0941 at 969.614 kb on + strand, within B158DRAFT_0941 at 969.614 kb on + strand, within B158DRAFT_0941 at 969.614 kb on + strand, within B158DRAFT_0941 at 969.622 kb on - strand, within B158DRAFT_0941 at 969.622 kb on - strand, within B158DRAFT_0941 at 969.690 kb on + strand at 969.745 kb on - strand at 969.796 kb on + strand at 969.814 kb on - strand at 969.877 kb on - strand at 969.898 kb on + strand at 969.921 kb on - strand at 969.938 kb on - strand at 969.938 kb on - strand at 969.980 kb on + strand at 969.988 kb on - strand at 969.996 kb on + strand at 970.000 kb on + strand at 970.006 kb on - strand at 970.026 kb on - strand at 970.042 kb on + strand at 970.080 kb on + strand at 970.083 kb on - strand at 970.109 kb on + strand, within B158DRAFT_0942 at 970.109 kb on + strand, within B158DRAFT_0942 at 970.114 kb on + strand, within B158DRAFT_0942 at 970.117 kb on - strand, within B158DRAFT_0942 at 970.119 kb on + strand, within B158DRAFT_0942 at 970.122 kb on - strand, within B158DRAFT_0942 at 970.127 kb on - strand, within B158DRAFT_0942 at 970.237 kb on + strand, within B158DRAFT_0942 at 970.237 kb on + strand, within B158DRAFT_0942 at 970.237 kb on + strand, within B158DRAFT_0942 at 970.245 kb on - strand, within B158DRAFT_0942 at 970.245 kb on - strand, within B158DRAFT_0942 at 970.265 kb on - strand, within B158DRAFT_0942 at 970.269 kb on + strand, within B158DRAFT_0942 at 970.277 kb on - strand, within B158DRAFT_0942 at 970.279 kb on - strand, within B158DRAFT_0942 at 970.296 kb on - strand, within B158DRAFT_0942 at 970.377 kb on - strand, within B158DRAFT_0942 at 970.393 kb on + strand, within B158DRAFT_0942 at 970.393 kb on + strand, within B158DRAFT_0942 at 970.401 kb on - strand, within B158DRAFT_0942 at 970.434 kb on + strand, within B158DRAFT_0942 at 970.459 kb on - strand, within B158DRAFT_0942 at 970.546 kb on - strand, within B158DRAFT_0942 at 970.558 kb on - strand, within B158DRAFT_0942 at 970.614 kb on + strand, within B158DRAFT_0942 at 970.614 kb on + strand, within B158DRAFT_0942 at 970.617 kb on - strand, within B158DRAFT_0942 at 970.622 kb on - strand, within B158DRAFT_0942 at 970.622 kb on - strand, within B158DRAFT_0942 at 970.622 kb on - strand, within B158DRAFT_0942 at 970.622 kb on - strand, within B158DRAFT_0942 at 970.622 kb on - strand, within B158DRAFT_0942 at 970.624 kb on + strand, within B158DRAFT_0942 at 970.659 kb on - strand, within B158DRAFT_0942 at 970.669 kb on + strand, within B158DRAFT_0942 at 970.669 kb on + strand, within B158DRAFT_0942 at 970.676 kb on + strand, within B158DRAFT_0942 at 970.684 kb on - strand, within B158DRAFT_0942 at 970.689 kb on - strand, within B158DRAFT_0942 at 970.728 kb on - strand, within B158DRAFT_0942 at 970.741 kb on + strand, within B158DRAFT_0942 at 970.749 kb on - strand, within B158DRAFT_0942 at 970.754 kb on - strand, within B158DRAFT_0942 at 970.754 kb on - strand, within B158DRAFT_0942 at 970.754 kb on - strand, within B158DRAFT_0942
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 967,931 - B158DRAFT_0940 0.12 +0.4 967,931 - B158DRAFT_0940 0.12 -0.2 967,944 - B158DRAFT_0940 0.14 -0.9 968,026 + B158DRAFT_0940 0.21 +0.1 968,026 + B158DRAFT_0940 0.21 -1.3 968,034 - B158DRAFT_0940 0.22 -1.0 968,034 - B158DRAFT_0940 0.22 -0.3 968,036 + B158DRAFT_0940 0.22 -2.2 968,036 + B158DRAFT_0940 0.22 -1.4 968,044 - B158DRAFT_0940 0.22 -0.7 968,044 - B158DRAFT_0940 0.22 -1.6 968,044 - B158DRAFT_0940 0.22 -2.1 968,080 - B158DRAFT_0940 0.26 +1.1 968,176 - B158DRAFT_0940 0.34 -0.2 968,216 - B158DRAFT_0940 0.38 +0.5 968,317 - B158DRAFT_0940 0.47 -1.4 968,338 + B158DRAFT_0940 0.49 +0.3 968,340 + B158DRAFT_0940 0.49 -0.9 968,346 - B158DRAFT_0940 0.49 -1.6 968,346 - B158DRAFT_0940 0.49 -0.4 968,346 - B158DRAFT_0940 0.49 +0.4 968,396 + B158DRAFT_0940 0.54 -0.2 968,396 + B158DRAFT_0940 0.54 +0.0 968,396 + B158DRAFT_0940 0.54 +3.4 968,396 + B158DRAFT_0940 0.54 -0.6 968,396 + B158DRAFT_0940 0.54 -0.8 968,396 + B158DRAFT_0940 0.54 -1.3 968,396 + B158DRAFT_0940 0.54 +0.0 968,396 + B158DRAFT_0940 0.54 -2.1 968,396 + B158DRAFT_0940 0.54 -2.5 968,398 + B158DRAFT_0940 0.54 +0.5 968,404 - B158DRAFT_0940 0.54 -0.9 968,404 - B158DRAFT_0940 0.54 -2.0 968,404 - B158DRAFT_0940 0.54 +1.2 968,404 - B158DRAFT_0940 0.54 -1.5 968,404 - B158DRAFT_0940 0.54 -1.3 968,404 - B158DRAFT_0940 0.54 -1.8 968,404 - B158DRAFT_0940 0.54 -0.0 968,404 - B158DRAFT_0940 0.54 -0.8 968,404 - B158DRAFT_0940 0.54 -2.1 968,404 - B158DRAFT_0940 0.54 -1.0 968,404 - B158DRAFT_0940 0.54 -0.1 968,404 - B158DRAFT_0940 0.54 -1.2 968,459 + B158DRAFT_0940 0.59 +0.5 968,612 - B158DRAFT_0940 0.73 -0.5 968,623 + B158DRAFT_0940 0.74 +1.4 968,631 - B158DRAFT_0940 0.75 -0.7 968,631 - B158DRAFT_0940 0.75 +0.1 968,631 - B158DRAFT_0940 0.75 -0.9 968,652 - B158DRAFT_0940 0.76 -0.8 968,765 + B158DRAFT_0940 0.86 -0.2 968,770 + B158DRAFT_0940 0.87 +0.0 968,773 - B158DRAFT_0940 0.87 -0.1 968,831 - -0.3 968,884 + -1.3 968,923 + -2.1 969,089 + B158DRAFT_0941 0.20 -0.9 969,089 + B158DRAFT_0941 0.20 -2.5 969,089 + B158DRAFT_0941 0.20 +1.8 969,089 + B158DRAFT_0941 0.20 -0.3 969,097 - B158DRAFT_0941 0.21 +0.3 969,097 - B158DRAFT_0941 0.21 -0.7 969,097 - B158DRAFT_0941 0.21 -1.8 969,119 + B158DRAFT_0941 0.23 -0.8 969,152 - B158DRAFT_0941 0.27 +0.3 969,221 + B158DRAFT_0941 0.35 -1.5 969,371 - B158DRAFT_0941 0.53 -0.1 969,507 - B158DRAFT_0941 0.70 -1.0 969,507 - B158DRAFT_0941 0.70 -0.9 969,522 + B158DRAFT_0941 0.71 +0.2 969,530 - B158DRAFT_0941 0.72 +0.3 969,607 - B158DRAFT_0941 0.81 -1.0 969,614 + B158DRAFT_0941 0.82 +1.5 969,614 + B158DRAFT_0941 0.82 +0.4 969,614 + B158DRAFT_0941 0.82 +0.1 969,622 - B158DRAFT_0941 0.83 -0.5 969,622 - B158DRAFT_0941 0.83 +0.5 969,690 + +2.8 969,745 - -1.1 969,796 + -0.6 969,814 - -0.8 969,877 - +0.2 969,898 + -0.4 969,921 - +0.1 969,938 - +0.6 969,938 - -0.6 969,980 + +0.5 969,988 - -1.0 969,996 + +0.4 970,000 + +0.6 970,006 - +0.3 970,026 - -1.6 970,042 + -0.7 970,080 + -0.3 970,083 - -0.7 970,109 + B158DRAFT_0942 0.11 -1.4 970,109 + B158DRAFT_0942 0.11 -0.6 970,114 + B158DRAFT_0942 0.11 -1.1 970,117 - B158DRAFT_0942 0.11 -0.9 970,119 + B158DRAFT_0942 0.11 -0.7 970,122 - B158DRAFT_0942 0.12 -0.2 970,127 - B158DRAFT_0942 0.12 -1.3 970,237 + B158DRAFT_0942 0.17 -0.2 970,237 + B158DRAFT_0942 0.17 -0.6 970,237 + B158DRAFT_0942 0.17 -0.2 970,245 - B158DRAFT_0942 0.17 -1.3 970,245 - B158DRAFT_0942 0.17 +0.1 970,265 - B158DRAFT_0942 0.18 -0.7 970,269 + B158DRAFT_0942 0.18 -2.9 970,277 - B158DRAFT_0942 0.18 -0.5 970,279 - B158DRAFT_0942 0.18 -0.0 970,296 - B158DRAFT_0942 0.19 -1.2 970,377 - B158DRAFT_0942 0.23 +1.8 970,393 + B158DRAFT_0942 0.23 -1.5 970,393 + B158DRAFT_0942 0.23 +2.1 970,401 - B158DRAFT_0942 0.24 -1.0 970,434 + B158DRAFT_0942 0.25 +0.8 970,459 - B158DRAFT_0942 0.26 -1.5 970,546 - B158DRAFT_0942 0.30 +1.2 970,558 - B158DRAFT_0942 0.31 -0.0 970,614 + B158DRAFT_0942 0.33 -1.0 970,614 + B158DRAFT_0942 0.33 +0.4 970,617 - B158DRAFT_0942 0.33 -1.5 970,622 - B158DRAFT_0942 0.33 -0.3 970,622 - B158DRAFT_0942 0.33 +0.5 970,622 - B158DRAFT_0942 0.33 -1.7 970,622 - B158DRAFT_0942 0.33 +1.4 970,622 - B158DRAFT_0942 0.33 -1.6 970,624 + B158DRAFT_0942 0.34 +0.2 970,659 - B158DRAFT_0942 0.35 +1.6 970,669 + B158DRAFT_0942 0.36 -1.5 970,669 + B158DRAFT_0942 0.36 -1.1 970,676 + B158DRAFT_0942 0.36 -1.1 970,684 - B158DRAFT_0942 0.36 -0.1 970,689 - B158DRAFT_0942 0.36 -1.6 970,728 - B158DRAFT_0942 0.38 -1.0 970,741 + B158DRAFT_0942 0.39 -0.2 970,749 - B158DRAFT_0942 0.39 -2.1 970,754 - B158DRAFT_0942 0.39 -0.7 970,754 - B158DRAFT_0942 0.39 -0.1 970,754 - B158DRAFT_0942 0.39 +1.9
Or see this region's nucleotide sequence