Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0911

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0910 and B158DRAFT_0911 are separated by 173 nucleotidesB158DRAFT_0911 and B158DRAFT_0912 are separated by 43 nucleotides B158DRAFT_0910: B158DRAFT_0910 - Glutamate dehydrogenase/leucine dehydrogenase, at 934,092 to 935,381 _0910 B158DRAFT_0911: B158DRAFT_0911 - Short-chain dehydrogenases of various substrate specificities, at 935,555 to 936,364 _0911 B158DRAFT_0912: B158DRAFT_0912 - diguanylate cyclase (GGDEF) domain, at 936,408 to 938,105 _0912 Position (kb) 935 936 937Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 934.563 kb on - strand, within B158DRAFT_0910at 934.565 kb on - strand, within B158DRAFT_0910at 934.577 kb on + strand, within B158DRAFT_0910at 934.579 kb on + strand, within B158DRAFT_0910at 934.579 kb on + strand, within B158DRAFT_0910at 934.579 kb on + strand, within B158DRAFT_0910at 934.579 kb on + strand, within B158DRAFT_0910at 934.587 kb on - strand, within B158DRAFT_0910at 934.587 kb on - strand, within B158DRAFT_0910at 934.587 kb on - strand, within B158DRAFT_0910at 934.587 kb on - strand, within B158DRAFT_0910at 934.625 kb on + strand, within B158DRAFT_0910at 934.625 kb on + strand, within B158DRAFT_0910at 934.633 kb on - strand, within B158DRAFT_0910at 934.633 kb on - strand, within B158DRAFT_0910at 934.633 kb on - strand, within B158DRAFT_0910at 934.633 kb on - strand, within B158DRAFT_0910at 934.633 kb on - strand, within B158DRAFT_0910at 934.711 kb on - strand, within B158DRAFT_0910at 934.724 kb on - strand, within B158DRAFT_0910at 934.742 kb on - strand, within B158DRAFT_0910at 934.795 kb on - strand, within B158DRAFT_0910at 934.802 kb on + strand, within B158DRAFT_0910at 934.802 kb on + strand, within B158DRAFT_0910at 934.810 kb on - strand, within B158DRAFT_0910at 934.826 kb on + strand, within B158DRAFT_0910at 934.827 kb on + strand, within B158DRAFT_0910at 934.850 kb on + strand, within B158DRAFT_0910at 934.851 kb on + strand, within B158DRAFT_0910at 934.851 kb on + strand, within B158DRAFT_0910at 934.852 kb on + strand, within B158DRAFT_0910at 934.852 kb on + strand, within B158DRAFT_0910at 934.942 kb on + strand, within B158DRAFT_0910at 934.949 kb on + strand, within B158DRAFT_0910at 934.950 kb on - strand, within B158DRAFT_0910at 934.975 kb on + strand, within B158DRAFT_0910at 934.975 kb on + strand, within B158DRAFT_0910at 934.983 kb on - strand, within B158DRAFT_0910at 934.983 kb on - strand, within B158DRAFT_0910at 934.983 kb on - strand, within B158DRAFT_0910at 935.088 kb on - strand, within B158DRAFT_0910at 935.091 kb on + strand, within B158DRAFT_0910at 935.138 kb on - strand, within B158DRAFT_0910at 935.226 kb on + strand, within B158DRAFT_0910at 935.226 kb on + strand, within B158DRAFT_0910at 935.226 kb on + strand, within B158DRAFT_0910at 935.226 kb on + strand, within B158DRAFT_0910at 935.226 kb on + strand, within B158DRAFT_0910at 935.234 kb on - strand, within B158DRAFT_0910at 935.234 kb on - strand, within B158DRAFT_0910at 935.234 kb on - strand, within B158DRAFT_0910at 935.234 kb on - strand, within B158DRAFT_0910at 935.234 kb on - strand, within B158DRAFT_0910at 935.234 kb on - strand, within B158DRAFT_0910at 935.255 kb on + strandat 935.267 kb on - strandat 935.289 kb on + strandat 935.369 kb on + strandat 935.425 kb on + strandat 935.425 kb on + strandat 935.425 kb on + strandat 935.433 kb on + strandat 935.440 kb on - strandat 935.442 kb on + strandat 935.494 kb on - strandat 935.533 kb on + strandat 935.541 kb on - strandat 935.541 kb on - strandat 935.541 kb on - strandat 935.541 kb on - strandat 935.541 kb on - strandat 935.541 kb on - strandat 935.541 kb on - strandat 935.584 kb on + strandat 935.584 kb on + strandat 935.592 kb on - strandat 935.630 kb on + strandat 935.630 kb on + strandat 935.638 kb on - strand, within B158DRAFT_0911at 935.643 kb on - strand, within B158DRAFT_0911at 935.704 kb on + strand, within B158DRAFT_0911at 935.704 kb on + strand, within B158DRAFT_0911at 935.704 kb on + strand, within B158DRAFT_0911at 935.704 kb on + strand, within B158DRAFT_0911at 935.704 kb on + strand, within B158DRAFT_0911at 935.704 kb on + strand, within B158DRAFT_0911at 935.704 kb on + strand, within B158DRAFT_0911at 935.704 kb on + strand, within B158DRAFT_0911at 935.704 kb on + strand, within B158DRAFT_0911at 935.704 kb on + strand, within B158DRAFT_0911at 935.704 kb on + strand, within B158DRAFT_0911at 935.704 kb on + strand, within B158DRAFT_0911at 935.704 kb on + strand, within B158DRAFT_0911at 935.710 kb on + strand, within B158DRAFT_0911at 935.710 kb on + strand, within B158DRAFT_0911at 935.712 kb on - strand, within B158DRAFT_0911at 935.712 kb on - strand, within B158DRAFT_0911at 935.712 kb on - strand, within B158DRAFT_0911at 935.712 kb on - strand, within B158DRAFT_0911at 935.712 kb on - strand, within B158DRAFT_0911at 935.712 kb on - strand, within B158DRAFT_0911at 935.712 kb on - strand, within B158DRAFT_0911at 935.712 kb on - strand, within B158DRAFT_0911at 935.712 kb on - strand, within B158DRAFT_0911at 935.742 kb on + strand, within B158DRAFT_0911at 935.806 kb on + strand, within B158DRAFT_0911at 935.840 kb on + strand, within B158DRAFT_0911at 935.848 kb on - strand, within B158DRAFT_0911at 935.848 kb on - strand, within B158DRAFT_0911at 935.848 kb on - strand, within B158DRAFT_0911at 935.848 kb on - strand, within B158DRAFT_0911at 935.848 kb on - strand, within B158DRAFT_0911at 935.882 kb on - strand, within B158DRAFT_0911at 935.882 kb on - strand, within B158DRAFT_0911at 935.919 kb on + strand, within B158DRAFT_0911at 935.927 kb on - strand, within B158DRAFT_0911at 935.966 kb on - strand, within B158DRAFT_0911at 935.980 kb on - strand, within B158DRAFT_0911at 935.988 kb on + strand, within B158DRAFT_0911at 935.988 kb on + strand, within B158DRAFT_0911at 935.996 kb on - strand, within B158DRAFT_0911at 936.019 kb on + strand, within B158DRAFT_0911at 936.035 kb on + strand, within B158DRAFT_0911at 936.035 kb on + strand, within B158DRAFT_0911at 936.043 kb on - strand, within B158DRAFT_0911at 936.043 kb on - strand, within B158DRAFT_0911at 936.090 kb on + strand, within B158DRAFT_0911at 936.092 kb on - strand, within B158DRAFT_0911at 936.095 kb on + strand, within B158DRAFT_0911at 936.103 kb on + strand, within B158DRAFT_0911at 936.103 kb on + strand, within B158DRAFT_0911at 936.103 kb on + strand, within B158DRAFT_0911at 936.103 kb on - strand, within B158DRAFT_0911at 936.168 kb on + strand, within B158DRAFT_0911at 936.168 kb on + strand, within B158DRAFT_0911at 936.168 kb on + strand, within B158DRAFT_0911at 936.168 kb on + strand, within B158DRAFT_0911at 936.173 kb on + strand, within B158DRAFT_0911at 936.176 kb on - strand, within B158DRAFT_0911at 936.176 kb on - strand, within B158DRAFT_0911at 936.176 kb on - strand, within B158DRAFT_0911at 936.176 kb on - strand, within B158DRAFT_0911at 936.176 kb on - strand, within B158DRAFT_0911at 936.181 kb on - strand, within B158DRAFT_0911at 936.211 kb on + strand, within B158DRAFT_0911at 936.213 kb on + strand, within B158DRAFT_0911at 936.213 kb on + strand, within B158DRAFT_0911at 936.213 kb on + strand, within B158DRAFT_0911at 936.213 kb on + strand, within B158DRAFT_0911at 936.213 kb on + strand, within B158DRAFT_0911at 936.213 kb on + strand, within B158DRAFT_0911at 936.213 kb on + strand, within B158DRAFT_0911at 936.213 kb on + strand, within B158DRAFT_0911at 936.213 kb on + strandat 936.213 kb on + strand, within B158DRAFT_0911at 936.213 kb on + strand, within B158DRAFT_0911at 936.221 kb on - strand, within B158DRAFT_0911at 936.221 kb on - strand, within B158DRAFT_0911at 936.221 kb on - strand, within B158DRAFT_0911at 936.221 kb on - strand, within B158DRAFT_0911at 936.221 kb on - strand, within B158DRAFT_0911at 936.221 kb on - strand, within B158DRAFT_0911at 936.221 kb on - strand, within B158DRAFT_0911at 936.221 kb on - strand, within B158DRAFT_0911at 936.221 kb on - strand, within B158DRAFT_0911at 936.221 kb on - strand, within B158DRAFT_0911at 936.221 kb on - strand, within B158DRAFT_0911at 936.221 kb on - strand, within B158DRAFT_0911at 936.348 kb on + strandat 936.356 kb on - strandat 936.375 kb on - strandat 936.424 kb on - strandat 936.447 kb on + strandat 936.455 kb on - strandat 936.455 kb on - strandat 936.494 kb on + strandat 936.494 kb on + strandat 936.497 kb on - strandat 936.502 kb on - strandat 936.603 kb on - strand, within B158DRAFT_0912at 936.728 kb on + strand, within B158DRAFT_0912at 936.728 kb on + strand, within B158DRAFT_0912at 936.728 kb on - strand, within B158DRAFT_0912at 936.736 kb on - strand, within B158DRAFT_0912at 936.804 kb on + strand, within B158DRAFT_0912at 936.817 kb on - strand, within B158DRAFT_0912at 936.932 kb on + strand, within B158DRAFT_0912at 936.932 kb on + strand, within B158DRAFT_0912at 936.932 kb on + strand, within B158DRAFT_0912at 936.932 kb on + strand, within B158DRAFT_0912at 936.940 kb on - strand, within B158DRAFT_0912at 936.978 kb on + strand, within B158DRAFT_0912at 936.995 kb on - strand, within B158DRAFT_0912at 937.071 kb on - strand, within B158DRAFT_0912at 937.082 kb on + strand, within B158DRAFT_0912at 937.087 kb on + strand, within B158DRAFT_0912at 937.090 kb on - strand, within B158DRAFT_0912at 937.092 kb on + strand, within B158DRAFT_0912at 937.097 kb on + strand, within B158DRAFT_0912at 937.100 kb on - strand, within B158DRAFT_0912at 937.105 kb on - strand, within B158DRAFT_0912at 937.356 kb on + strand, within B158DRAFT_0912

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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934,563 - B158DRAFT_0910 0.37 +0.8
934,565 - B158DRAFT_0910 0.37 -0.6
934,577 + B158DRAFT_0910 0.38 -1.8
934,579 + B158DRAFT_0910 0.38 -0.0
934,579 + B158DRAFT_0910 0.38 -1.1
934,579 + B158DRAFT_0910 0.38 +1.2
934,579 + B158DRAFT_0910 0.38 -1.8
934,587 - B158DRAFT_0910 0.38 -0.8
934,587 - B158DRAFT_0910 0.38 +1.2
934,587 - B158DRAFT_0910 0.38 -1.0
934,587 - B158DRAFT_0910 0.38 -0.3
934,625 + B158DRAFT_0910 0.41 +0.7
934,625 + B158DRAFT_0910 0.41 -0.2
934,633 - B158DRAFT_0910 0.42 -0.5
934,633 - B158DRAFT_0910 0.42 -1.5
934,633 - B158DRAFT_0910 0.42 -1.9
934,633 - B158DRAFT_0910 0.42 +1.9
934,633 - B158DRAFT_0910 0.42 -0.1
934,711 - B158DRAFT_0910 0.48 -0.4
934,724 - B158DRAFT_0910 0.49 +2.8
934,742 - B158DRAFT_0910 0.50 -0.3
934,795 - B158DRAFT_0910 0.54 -1.4
934,802 + B158DRAFT_0910 0.55 -1.5
934,802 + B158DRAFT_0910 0.55 -1.2
934,810 - B158DRAFT_0910 0.56 +0.3
934,826 + B158DRAFT_0910 0.57 -0.5
934,827 + B158DRAFT_0910 0.57 -1.1
934,850 + B158DRAFT_0910 0.59 -1.7
934,851 + B158DRAFT_0910 0.59 +0.6
934,851 + B158DRAFT_0910 0.59 -1.2
934,852 + B158DRAFT_0910 0.59 -1.9
934,852 + B158DRAFT_0910 0.59 +0.5
934,942 + B158DRAFT_0910 0.66 +2.3
934,949 + B158DRAFT_0910 0.66 -0.9
934,950 - B158DRAFT_0910 0.67 -1.6
934,975 + B158DRAFT_0910 0.68 -3.3
934,975 + B158DRAFT_0910 0.68 -0.3
934,983 - B158DRAFT_0910 0.69 +0.1
934,983 - B158DRAFT_0910 0.69 -1.4
934,983 - B158DRAFT_0910 0.69 +0.0
935,088 - B158DRAFT_0910 0.77 -1.4
935,091 + B158DRAFT_0910 0.77 -1.0
935,138 - B158DRAFT_0910 0.81 -0.4
935,226 + B158DRAFT_0910 0.88 -0.6
935,226 + B158DRAFT_0910 0.88 -1.3
935,226 + B158DRAFT_0910 0.88 -0.0
935,226 + B158DRAFT_0910 0.88 -1.2
935,226 + B158DRAFT_0910 0.88 -0.8
935,234 - B158DRAFT_0910 0.89 -0.1
935,234 - B158DRAFT_0910 0.89 -1.0
935,234 - B158DRAFT_0910 0.89 +0.7
935,234 - B158DRAFT_0910 0.89 -1.6
935,234 - B158DRAFT_0910 0.89 -0.9
935,234 - B158DRAFT_0910 0.89 +0.1
935,255 + -0.9
935,267 - +0.9
935,289 + -0.8
935,369 + -0.2
935,425 + -0.2
935,425 + +0.3
935,425 + -1.3
935,433 + -1.7
935,440 - -0.8
935,442 + -1.6
935,494 - -0.5
935,533 + +0.6
935,541 - -0.2
935,541 - -0.0
935,541 - -0.1
935,541 - +1.6
935,541 - +0.2
935,541 - -1.9
935,541 - +0.5
935,584 + -0.9
935,584 + -1.5
935,592 - -0.2
935,630 + -1.0
935,630 + -2.1
935,638 - B158DRAFT_0911 0.10 -0.9
935,643 - B158DRAFT_0911 0.11 -0.2
935,704 + B158DRAFT_0911 0.18 -0.1
935,704 + B158DRAFT_0911 0.18 -0.4
935,704 + B158DRAFT_0911 0.18 +0.1
935,704 + B158DRAFT_0911 0.18 -3.8
935,704 + B158DRAFT_0911 0.18 -1.7
935,704 + B158DRAFT_0911 0.18 -1.0
935,704 + B158DRAFT_0911 0.18 -0.3
935,704 + B158DRAFT_0911 0.18 -0.4
935,704 + B158DRAFT_0911 0.18 -1.5
935,704 + B158DRAFT_0911 0.18 +0.2
935,704 + B158DRAFT_0911 0.18 +0.5
935,704 + B158DRAFT_0911 0.18 +1.0
935,704 + B158DRAFT_0911 0.18 -1.2
935,710 + B158DRAFT_0911 0.19 +0.0
935,710 + B158DRAFT_0911 0.19 -0.3
935,712 - B158DRAFT_0911 0.19 -1.5
935,712 - B158DRAFT_0911 0.19 +0.3
935,712 - B158DRAFT_0911 0.19 +0.5
935,712 - B158DRAFT_0911 0.19 -0.5
935,712 - B158DRAFT_0911 0.19 -1.0
935,712 - B158DRAFT_0911 0.19 +0.9
935,712 - B158DRAFT_0911 0.19 -0.6
935,712 - B158DRAFT_0911 0.19 +1.4
935,712 - B158DRAFT_0911 0.19 -2.5
935,742 + B158DRAFT_0911 0.23 -0.7
935,806 + B158DRAFT_0911 0.31 +1.1
935,840 + B158DRAFT_0911 0.35 -0.6
935,848 - B158DRAFT_0911 0.36 +0.4
935,848 - B158DRAFT_0911 0.36 +0.5
935,848 - B158DRAFT_0911 0.36 +1.7
935,848 - B158DRAFT_0911 0.36 +0.5
935,848 - B158DRAFT_0911 0.36 -0.9
935,882 - B158DRAFT_0911 0.40 -0.9
935,882 - B158DRAFT_0911 0.40 +0.1
935,919 + B158DRAFT_0911 0.45 -0.9
935,927 - B158DRAFT_0911 0.46 +0.5
935,966 - B158DRAFT_0911 0.51 -1.3
935,980 - B158DRAFT_0911 0.52 +0.0
935,988 + B158DRAFT_0911 0.53 -1.1
935,988 + B158DRAFT_0911 0.53 +0.4
935,996 - B158DRAFT_0911 0.54 -0.9
936,019 + B158DRAFT_0911 0.57 +0.5
936,035 + B158DRAFT_0911 0.59 -1.1
936,035 + B158DRAFT_0911 0.59 -0.3
936,043 - B158DRAFT_0911 0.60 -2.3
936,043 - B158DRAFT_0911 0.60 +0.3
936,090 + B158DRAFT_0911 0.66 -1.2
936,092 - B158DRAFT_0911 0.66 -0.9
936,095 + B158DRAFT_0911 0.67 -2.0
936,103 + B158DRAFT_0911 0.68 +0.8
936,103 + B158DRAFT_0911 0.68 +0.7
936,103 + B158DRAFT_0911 0.68 -0.0
936,103 - B158DRAFT_0911 0.68 -1.9
936,168 + B158DRAFT_0911 0.76 +0.7
936,168 + B158DRAFT_0911 0.76 -0.2
936,168 + B158DRAFT_0911 0.76 +0.7
936,168 + B158DRAFT_0911 0.76 -1.1
936,173 + B158DRAFT_0911 0.76 -1.1
936,176 - B158DRAFT_0911 0.77 +0.2
936,176 - B158DRAFT_0911 0.77 -0.5
936,176 - B158DRAFT_0911 0.77 +0.2
936,176 - B158DRAFT_0911 0.77 -0.7
936,176 - B158DRAFT_0911 0.77 +0.3
936,181 - B158DRAFT_0911 0.77 -0.7
936,211 + B158DRAFT_0911 0.81 +1.0
936,213 + B158DRAFT_0911 0.81 -1.6
936,213 + B158DRAFT_0911 0.81 -0.7
936,213 + B158DRAFT_0911 0.81 +0.3
936,213 + B158DRAFT_0911 0.81 +0.6
936,213 + B158DRAFT_0911 0.81 -0.0
936,213 + B158DRAFT_0911 0.81 -0.4
936,213 + B158DRAFT_0911 0.81 -0.2
936,213 + B158DRAFT_0911 0.81 +0.3
936,213 + +2.3
936,213 + B158DRAFT_0911 0.81 -1.2
936,213 + B158DRAFT_0911 0.81 -0.8
936,221 - B158DRAFT_0911 0.82 -1.2
936,221 - B158DRAFT_0911 0.82 +1.3
936,221 - B158DRAFT_0911 0.82 +0.7
936,221 - B158DRAFT_0911 0.82 -0.1
936,221 - B158DRAFT_0911 0.82 -0.4
936,221 - B158DRAFT_0911 0.82 +1.2
936,221 - B158DRAFT_0911 0.82 -0.6
936,221 - B158DRAFT_0911 0.82 -0.5
936,221 - B158DRAFT_0911 0.82 +0.8
936,221 - B158DRAFT_0911 0.82 -1.8
936,221 - B158DRAFT_0911 0.82 -0.9
936,221 - B158DRAFT_0911 0.82 -0.3
936,348 + -0.7
936,356 - -0.6
936,375 - -1.1
936,424 - -0.5
936,447 + +0.3
936,455 - +2.4
936,455 - -0.3
936,494 + -2.3
936,494 + +1.9
936,497 - -0.3
936,502 - +0.7
936,603 - B158DRAFT_0912 0.11 -1.8
936,728 + B158DRAFT_0912 0.19 -1.6
936,728 + B158DRAFT_0912 0.19 -0.3
936,728 - B158DRAFT_0912 0.19 -1.1
936,736 - B158DRAFT_0912 0.19 -2.8
936,804 + B158DRAFT_0912 0.23 +1.6
936,817 - B158DRAFT_0912 0.24 -2.2
936,932 + B158DRAFT_0912 0.31 -1.6
936,932 + B158DRAFT_0912 0.31 -0.3
936,932 + B158DRAFT_0912 0.31 -0.4
936,932 + B158DRAFT_0912 0.31 +2.4
936,940 - B158DRAFT_0912 0.31 +0.9
936,978 + B158DRAFT_0912 0.34 -0.2
936,995 - B158DRAFT_0912 0.35 +1.0
937,071 - B158DRAFT_0912 0.39 -0.5
937,082 + B158DRAFT_0912 0.40 -0.0
937,087 + B158DRAFT_0912 0.40 -2.0
937,090 - B158DRAFT_0912 0.40 +0.8
937,092 + B158DRAFT_0912 0.40 +1.5
937,097 + B158DRAFT_0912 0.41 -2.1
937,100 - B158DRAFT_0912 0.41 -0.3
937,105 - B158DRAFT_0912 0.41 -1.7
937,356 + B158DRAFT_0912 0.56 -0.8

Or see this region's nucleotide sequence