Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0805 and B158DRAFT_0806 are separated by 260 nucleotides B158DRAFT_0806 and B158DRAFT_0807 are separated by 1 nucleotides B158DRAFT_0807 and B158DRAFT_0808 overlap by 4 nucleotides B158DRAFT_0808 and B158DRAFT_0809 are separated by 56 nucleotides
B158DRAFT_0805: B158DRAFT_0805 - Cation/multidrug efflux pump, at 813,554 to 816,658
_0805
B158DRAFT_0806: B158DRAFT_0806 - hypothetical protein, at 816,919 to 817,314
_0806
B158DRAFT_0807: B158DRAFT_0807 - Predicted GTPase, at 817,316 to 817,858
_0807
B158DRAFT_0808: B158DRAFT_0808 - Uncharacterized distant relative of homeotic protein bithoraxoid, at 817,855 to 818,229
_0808
B158DRAFT_0809: B158DRAFT_0809 - hypothetical protein, at 818,286 to 818,645
_0809
Position (kb) 816
817
818 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 815.936 kb on + strand, within B158DRAFT_0805 at 815.949 kb on - strand, within B158DRAFT_0805 at 815.991 kb on + strand, within B158DRAFT_0805 at 816.003 kb on + strand, within B158DRAFT_0805 at 816.011 kb on - strand, within B158DRAFT_0805 at 816.082 kb on + strand, within B158DRAFT_0805 at 816.090 kb on - strand, within B158DRAFT_0805 at 816.121 kb on - strand, within B158DRAFT_0805 at 816.158 kb on + strand, within B158DRAFT_0805 at 816.204 kb on + strand, within B158DRAFT_0805 at 816.223 kb on + strand, within B158DRAFT_0805 at 816.339 kb on + strand, within B158DRAFT_0805 at 816.356 kb on + strand at 816.357 kb on + strand at 816.357 kb on + strand at 816.365 kb on - strand at 816.365 kb on - strand at 816.417 kb on + strand at 816.417 kb on + strand at 816.422 kb on + strand at 816.425 kb on - strand at 816.432 kb on + strand at 816.458 kb on + strand at 816.493 kb on - strand at 816.587 kb on - strand at 816.618 kb on - strand at 816.618 kb on - strand at 816.625 kb on + strand at 816.668 kb on + strand at 816.676 kb on - strand at 816.679 kb on + strand at 816.679 kb on + strand at 816.679 kb on + strand at 816.687 kb on - strand at 816.687 kb on - strand at 816.687 kb on - strand at 816.687 kb on - strand at 816.707 kb on + strand at 816.847 kb on + strand at 816.871 kb on + strand at 816.879 kb on - strand at 816.972 kb on - strand, within B158DRAFT_0806 at 816.972 kb on - strand, within B158DRAFT_0806 at 816.984 kb on + strand, within B158DRAFT_0806 at 816.986 kb on - strand, within B158DRAFT_0806 at 816.992 kb on - strand, within B158DRAFT_0806 at 816.992 kb on - strand, within B158DRAFT_0806 at 816.992 kb on - strand, within B158DRAFT_0806 at 817.046 kb on + strand, within B158DRAFT_0806 at 817.054 kb on - strand, within B158DRAFT_0806 at 817.088 kb on - strand, within B158DRAFT_0806 at 817.120 kb on + strand, within B158DRAFT_0806 at 817.137 kb on + strand, within B158DRAFT_0806 at 817.157 kb on + strand, within B158DRAFT_0806 at 817.180 kb on - strand, within B158DRAFT_0806 at 817.272 kb on - strand, within B158DRAFT_0806 at 817.299 kb on + strand at 817.299 kb on + strand at 817.307 kb on - strand at 817.308 kb on + strand at 817.308 kb on + strand at 817.316 kb on - strand at 817.490 kb on + strand, within B158DRAFT_0807 at 817.496 kb on + strand, within B158DRAFT_0807 at 817.496 kb on + strand, within B158DRAFT_0807 at 817.496 kb on + strand, within B158DRAFT_0807 at 817.504 kb on - strand, within B158DRAFT_0807 at 817.504 kb on - strand, within B158DRAFT_0807 at 817.729 kb on + strand, within B158DRAFT_0807 at 817.745 kb on + strand, within B158DRAFT_0807 at 817.761 kb on - strand, within B158DRAFT_0807 at 818.149 kb on + strand, within B158DRAFT_0808
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 815,936 + B158DRAFT_0805 0.77 -1.2 815,949 - B158DRAFT_0805 0.77 +0.3 815,991 + B158DRAFT_0805 0.78 -1.0 816,003 + B158DRAFT_0805 0.79 -0.4 816,011 - B158DRAFT_0805 0.79 -0.4 816,082 + B158DRAFT_0805 0.81 -1.6 816,090 - B158DRAFT_0805 0.82 +1.6 816,121 - B158DRAFT_0805 0.83 -0.4 816,158 + B158DRAFT_0805 0.84 -0.3 816,204 + B158DRAFT_0805 0.85 +0.7 816,223 + B158DRAFT_0805 0.86 +0.5 816,339 + B158DRAFT_0805 0.90 +0.2 816,356 + +1.0 816,357 + +1.9 816,357 + -0.5 816,365 - +1.5 816,365 - +0.1 816,417 + +0.4 816,417 + -1.8 816,422 + +2.8 816,425 - -0.8 816,432 + +0.4 816,458 + -1.0 816,493 - +0.3 816,587 - -1.6 816,618 - -0.8 816,618 - -1.5 816,625 + -1.9 816,668 + -0.7 816,676 - -1.0 816,679 + -0.8 816,679 + -0.0 816,679 + +1.1 816,687 - -1.2 816,687 - +2.5 816,687 - -1.0 816,687 - -0.5 816,707 + -0.2 816,847 + +0.8 816,871 + -0.4 816,879 - -1.1 816,972 - B158DRAFT_0806 0.13 -2.3 816,972 - B158DRAFT_0806 0.13 +0.2 816,984 + B158DRAFT_0806 0.16 -1.1 816,986 - B158DRAFT_0806 0.17 -0.5 816,992 - B158DRAFT_0806 0.18 -0.7 816,992 - B158DRAFT_0806 0.18 +0.6 816,992 - B158DRAFT_0806 0.18 +1.0 817,046 + B158DRAFT_0806 0.32 -1.4 817,054 - B158DRAFT_0806 0.34 -2.0 817,088 - B158DRAFT_0806 0.43 -0.7 817,120 + B158DRAFT_0806 0.51 +0.5 817,137 + B158DRAFT_0806 0.55 -0.3 817,157 + B158DRAFT_0806 0.60 -1.0 817,180 - B158DRAFT_0806 0.66 +0.6 817,272 - B158DRAFT_0806 0.89 -0.2 817,299 + +0.4 817,299 + -0.9 817,307 - -1.3 817,308 + +0.9 817,308 + +0.0 817,316 - -1.3 817,490 + B158DRAFT_0807 0.32 -1.2 817,496 + B158DRAFT_0807 0.33 -0.1 817,496 + B158DRAFT_0807 0.33 +1.3 817,496 + B158DRAFT_0807 0.33 +2.4 817,504 - B158DRAFT_0807 0.35 +1.1 817,504 - B158DRAFT_0807 0.35 -0.8 817,729 + B158DRAFT_0807 0.76 -0.9 817,745 + B158DRAFT_0807 0.79 -1.1 817,761 - B158DRAFT_0807 0.82 -0.8 818,149 + B158DRAFT_0808 0.78 +0.1
Or see this region's nucleotide sequence