Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0787 and B158DRAFT_0788 are separated by 90 nucleotides B158DRAFT_0788 and B158DRAFT_0789 are separated by 19 nucleotides B158DRAFT_0789 and B158DRAFT_0790 overlap by 4 nucleotides
B158DRAFT_0787: B158DRAFT_0787 - PilZ domain., at 791,154 to 791,447
_0787
B158DRAFT_0788: B158DRAFT_0788 - dimethyladenosine transferase, at 791,538 to 792,347
_0788
B158DRAFT_0789: B158DRAFT_0789 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 792,367 to 793,365
_0789
B158DRAFT_0790: B158DRAFT_0790 - periplasmic chaperone for outer membrane proteins SurA, at 793,362 to 794,645
_0790
Position (kb) 792
793
794 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 791.384 kb on + strand, within B158DRAFT_0787 at 791.384 kb on + strand, within B158DRAFT_0787 at 791.384 kb on + strand, within B158DRAFT_0787 at 791.384 kb on + strand, within B158DRAFT_0787 at 791.434 kb on + strand at 791.442 kb on - strand at 791.503 kb on + strand at 791.511 kb on - strand at 791.571 kb on + strand at 791.579 kb on - strand at 791.595 kb on + strand at 791.595 kb on + strand at 791.605 kb on + strand at 791.608 kb on - strand at 791.618 kb on + strand at 791.633 kb on + strand, within B158DRAFT_0788 at 791.680 kb on + strand, within B158DRAFT_0788 at 791.703 kb on + strand, within B158DRAFT_0788 at 791.727 kb on + strand, within B158DRAFT_0788 at 791.745 kb on + strand, within B158DRAFT_0788 at 791.758 kb on - strand, within B158DRAFT_0788 at 791.763 kb on - strand, within B158DRAFT_0788 at 791.779 kb on - strand, within B158DRAFT_0788 at 791.779 kb on - strand, within B158DRAFT_0788 at 791.813 kb on - strand, within B158DRAFT_0788 at 791.832 kb on - strand, within B158DRAFT_0788 at 791.889 kb on + strand, within B158DRAFT_0788 at 791.897 kb on + strand, within B158DRAFT_0788 at 791.905 kb on - strand, within B158DRAFT_0788 at 791.915 kb on - strand, within B158DRAFT_0788 at 791.955 kb on + strand, within B158DRAFT_0788 at 791.999 kb on - strand, within B158DRAFT_0788 at 792.006 kb on + strand, within B158DRAFT_0788 at 792.030 kb on - strand, within B158DRAFT_0788 at 792.030 kb on - strand, within B158DRAFT_0788 at 792.030 kb on - strand, within B158DRAFT_0788 at 792.030 kb on - strand, within B158DRAFT_0788 at 792.085 kb on + strand, within B158DRAFT_0788 at 792.136 kb on + strand, within B158DRAFT_0788 at 792.169 kb on + strand, within B158DRAFT_0788 at 792.177 kb on - strand, within B158DRAFT_0788 at 792.205 kb on - strand, within B158DRAFT_0788 at 792.211 kb on - strand, within B158DRAFT_0788 at 792.254 kb on + strand, within B158DRAFT_0788 at 792.268 kb on + strand at 792.312 kb on + strand at 792.322 kb on + strand at 792.322 kb on + strand at 792.329 kb on - strand at 792.388 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 791,384 + B158DRAFT_0787 0.78 -2.8 791,384 + B158DRAFT_0787 0.78 -0.4 791,384 + B158DRAFT_0787 0.78 -0.5 791,384 + B158DRAFT_0787 0.78 -0.5 791,434 + +1.0 791,442 - -2.3 791,503 + -0.7 791,511 - -1.7 791,571 + -3.0 791,579 - -0.9 791,595 + +0.5 791,595 + -0.7 791,605 + -2.9 791,608 - +1.6 791,618 + -1.0 791,633 + B158DRAFT_0788 0.12 -0.7 791,680 + B158DRAFT_0788 0.18 +0.1 791,703 + B158DRAFT_0788 0.20 -1.1 791,727 + B158DRAFT_0788 0.23 +1.9 791,745 + B158DRAFT_0788 0.26 -0.4 791,758 - B158DRAFT_0788 0.27 +0.2 791,763 - B158DRAFT_0788 0.28 -1.4 791,779 - B158DRAFT_0788 0.30 -1.6 791,779 - B158DRAFT_0788 0.30 +0.6 791,813 - B158DRAFT_0788 0.34 -0.8 791,832 - B158DRAFT_0788 0.36 +0.5 791,889 + B158DRAFT_0788 0.43 -1.1 791,897 + B158DRAFT_0788 0.44 -1.1 791,905 - B158DRAFT_0788 0.45 +1.6 791,915 - B158DRAFT_0788 0.47 +0.1 791,955 + B158DRAFT_0788 0.51 -0.1 791,999 - B158DRAFT_0788 0.57 -0.8 792,006 + B158DRAFT_0788 0.58 -1.8 792,030 - B158DRAFT_0788 0.61 -0.9 792,030 - B158DRAFT_0788 0.61 +0.1 792,030 - B158DRAFT_0788 0.61 +0.2 792,030 - B158DRAFT_0788 0.61 +0.2 792,085 + B158DRAFT_0788 0.68 -0.1 792,136 + B158DRAFT_0788 0.74 -0.5 792,169 + B158DRAFT_0788 0.78 -1.1 792,177 - B158DRAFT_0788 0.79 -0.0 792,205 - B158DRAFT_0788 0.82 -1.2 792,211 - B158DRAFT_0788 0.83 -0.5 792,254 + B158DRAFT_0788 0.88 +1.3 792,268 + -0.6 792,312 + -0.3 792,322 + +1.2 792,322 + -0.4 792,329 - +0.7 792,388 + +0.4
Or see this region's nucleotide sequence