Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0742 and B158DRAFT_0743 are separated by 30 nucleotides B158DRAFT_0743 and B158DRAFT_0744 are separated by 24 nucleotides B158DRAFT_0744 and B158DRAFT_0745 are separated by 18 nucleotides B158DRAFT_0745 and B158DRAFT_0746 are separated by 171 nucleotides
B158DRAFT_0742: B158DRAFT_0742 - 2-octaprenylphenol hydroxylase (EC 1.14.13.-), at 745,235 to 746,881
_0742
B158DRAFT_0743: B158DRAFT_0743 - Uncharacterized protein conserved in bacteria, at 746,912 to 747,550
_0743
B158DRAFT_0744: B158DRAFT_0744 - ubiquinone/menaquinone biosynthesis methyltransferases, at 747,575 to 748,342
_0744
B158DRAFT_0745: B158DRAFT_0745 - Uncharacterized protein conserved in bacteria, at 748,361 to 748,765
_0745
B158DRAFT_0746: B158DRAFT_0746 - Subtilisin-like serine proteases, at 748,937 to 750,787
_0746
Position (kb) 747
748
749 Strain fitness (log2 ratio) -2
-1
0
1
2 at 746.978 kb on - strand, within B158DRAFT_0743 at 747.380 kb on - strand, within B158DRAFT_0743 at 747.476 kb on - strand, within B158DRAFT_0743 at 747.476 kb on - strand, within B158DRAFT_0743 at 747.538 kb on - strand at 747.566 kb on - strand at 748.352 kb on - strand at 748.352 kb on - strand at 748.352 kb on - strand at 748.465 kb on - strand, within B158DRAFT_0745 at 748.478 kb on - strand, within B158DRAFT_0745 at 748.499 kb on + strand, within B158DRAFT_0745 at 748.502 kb on - strand, within B158DRAFT_0745 at 748.519 kb on - strand, within B158DRAFT_0745 at 748.535 kb on - strand, within B158DRAFT_0745 at 748.602 kb on + strand, within B158DRAFT_0745 at 748.782 kb on + strand at 748.782 kb on + strand at 748.782 kb on + strand at 748.782 kb on + strand at 748.790 kb on - strand at 748.830 kb on + strand at 748.830 kb on - strand at 748.874 kb on + strand at 748.957 kb on + strand at 749.016 kb on + strand at 749.016 kb on + strand at 749.016 kb on + strand at 749.024 kb on - strand at 749.024 kb on - strand at 749.086 kb on + strand at 749.094 kb on + strand at 749.094 kb on - strand at 749.135 kb on + strand, within B158DRAFT_0746 at 749.135 kb on + strand, within B158DRAFT_0746 at 749.135 kb on + strand, within B158DRAFT_0746 at 749.143 kb on + strand, within B158DRAFT_0746 at 749.151 kb on - strand, within B158DRAFT_0746 at 749.153 kb on + strand, within B158DRAFT_0746 at 749.153 kb on + strand, within B158DRAFT_0746 at 749.153 kb on + strand, within B158DRAFT_0746 at 749.161 kb on - strand, within B158DRAFT_0746 at 749.170 kb on + strand, within B158DRAFT_0746 at 749.175 kb on + strand, within B158DRAFT_0746 at 749.188 kb on - strand, within B158DRAFT_0746 at 749.193 kb on - strand, within B158DRAFT_0746 at 749.213 kb on - strand, within B158DRAFT_0746 at 749.213 kb on - strand, within B158DRAFT_0746 at 749.229 kb on - strand, within B158DRAFT_0746 at 749.248 kb on + strand, within B158DRAFT_0746 at 749.314 kb on + strand, within B158DRAFT_0746 at 749.314 kb on + strand, within B158DRAFT_0746 at 749.322 kb on - strand, within B158DRAFT_0746 at 749.322 kb on - strand, within B158DRAFT_0746 at 749.322 kb on - strand, within B158DRAFT_0746
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 746,978 - B158DRAFT_0743 0.10 -1.2 747,380 - B158DRAFT_0743 0.73 +2.0 747,476 - B158DRAFT_0743 0.88 -1.4 747,476 - B158DRAFT_0743 0.88 -0.6 747,538 - -0.0 747,566 - -1.7 748,352 - -0.6 748,352 - +1.3 748,352 - -0.5 748,465 - B158DRAFT_0745 0.26 -0.7 748,478 - B158DRAFT_0745 0.29 -1.5 748,499 + B158DRAFT_0745 0.34 +0.6 748,502 - B158DRAFT_0745 0.35 -1.4 748,519 - B158DRAFT_0745 0.39 -0.8 748,535 - B158DRAFT_0745 0.43 -1.5 748,602 + B158DRAFT_0745 0.60 -0.8 748,782 + -1.1 748,782 + +1.2 748,782 + -0.9 748,782 + +0.0 748,790 - -0.5 748,830 + -2.2 748,830 - -1.9 748,874 + -1.3 748,957 + -2.1 749,016 + -0.6 749,016 + -1.9 749,016 + -1.2 749,024 - +1.7 749,024 - +1.4 749,086 + -0.3 749,094 + +0.2 749,094 - +0.4 749,135 + B158DRAFT_0746 0.11 -1.8 749,135 + B158DRAFT_0746 0.11 -1.9 749,135 + B158DRAFT_0746 0.11 -1.8 749,143 + B158DRAFT_0746 0.11 -1.5 749,151 - B158DRAFT_0746 0.12 -0.1 749,153 + B158DRAFT_0746 0.12 -0.5 749,153 + B158DRAFT_0746 0.12 -1.3 749,153 + B158DRAFT_0746 0.12 -0.7 749,161 - B158DRAFT_0746 0.12 -1.0 749,170 + B158DRAFT_0746 0.13 +1.5 749,175 + B158DRAFT_0746 0.13 -1.2 749,188 - B158DRAFT_0746 0.14 +0.6 749,193 - B158DRAFT_0746 0.14 +0.7 749,213 - B158DRAFT_0746 0.15 -0.6 749,213 - B158DRAFT_0746 0.15 -0.9 749,229 - B158DRAFT_0746 0.16 -0.8 749,248 + B158DRAFT_0746 0.17 -1.3 749,314 + B158DRAFT_0746 0.20 -1.5 749,314 + B158DRAFT_0746 0.20 -1.4 749,322 - B158DRAFT_0746 0.21 -0.6 749,322 - B158DRAFT_0746 0.21 -1.6 749,322 - B158DRAFT_0746 0.21 -0.2
Or see this region's nucleotide sequence