Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0298

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0296 and B158DRAFT_0297 are separated by 606 nucleotidesB158DRAFT_0297 and B158DRAFT_0298 are separated by 2 nucleotidesB158DRAFT_0298 and B158DRAFT_0299 are separated by 146 nucleotidesB158DRAFT_0299 and B158DRAFT_0300 are separated by 23 nucleotides B158DRAFT_0296: B158DRAFT_0296 - Uncharacterized protein conserved in bacteria, at 299,840 to 300,304 _0296 B158DRAFT_0297: B158DRAFT_0297 - Uncharacterized conserved protein, at 300,911 to 301,297 _0297 B158DRAFT_0298: B158DRAFT_0298 - Cysteine synthase, at 301,300 to 302,352 _0298 B158DRAFT_0299: B158DRAFT_0299 - Predicted proline hydroxylase, at 302,499 to 303,155 _0299 B158DRAFT_0300: B158DRAFT_0300 - diguanylate cyclase (GGDEF) domain, at 303,179 to 305,236 _0300 Position (kb) 301 302 303Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 301.085 kb on + strand, within B158DRAFT_0297at 301.156 kb on + strand, within B158DRAFT_0297at 301.156 kb on + strand, within B158DRAFT_0297at 301.218 kb on + strand, within B158DRAFT_0297at 301.343 kb on + strandat 301.472 kb on + strand, within B158DRAFT_0298at 301.529 kb on + strand, within B158DRAFT_0298at 301.532 kb on - strand, within B158DRAFT_0298at 301.537 kb on + strand, within B158DRAFT_0298at 301.603 kb on + strand, within B158DRAFT_0298at 301.611 kb on - strand, within B158DRAFT_0298at 301.681 kb on + strand, within B158DRAFT_0298at 301.681 kb on + strand, within B158DRAFT_0298at 301.681 kb on + strand, within B158DRAFT_0298at 301.688 kb on + strand, within B158DRAFT_0298at 301.689 kb on - strand, within B158DRAFT_0298at 301.689 kb on - strand, within B158DRAFT_0298at 301.689 kb on - strand, within B158DRAFT_0298at 301.689 kb on - strand, within B158DRAFT_0298at 301.689 kb on - strand, within B158DRAFT_0298at 301.689 kb on - strand, within B158DRAFT_0298at 301.689 kb on - strand, within B158DRAFT_0298at 301.722 kb on + strand, within B158DRAFT_0298at 301.740 kb on + strand, within B158DRAFT_0298at 301.748 kb on - strand, within B158DRAFT_0298at 301.753 kb on - strand, within B158DRAFT_0298at 301.753 kb on - strand, within B158DRAFT_0298at 301.758 kb on + strand, within B158DRAFT_0298at 301.758 kb on - strand, within B158DRAFT_0298at 301.758 kb on - strand, within B158DRAFT_0298at 301.758 kb on - strand, within B158DRAFT_0298at 301.758 kb on - strand, within B158DRAFT_0298at 301.773 kb on + strand, within B158DRAFT_0298at 301.801 kb on + strand, within B158DRAFT_0298at 301.813 kb on + strand, within B158DRAFT_0298at 301.813 kb on + strand, within B158DRAFT_0298at 301.819 kb on - strand, within B158DRAFT_0298at 301.825 kb on + strand, within B158DRAFT_0298at 301.838 kb on + strand, within B158DRAFT_0298at 301.838 kb on + strand, within B158DRAFT_0298at 301.838 kb on + strand, within B158DRAFT_0298at 301.838 kb on + strand, within B158DRAFT_0298at 301.838 kb on + strand, within B158DRAFT_0298at 301.838 kb on + strand, within B158DRAFT_0298at 301.838 kb on + strand, within B158DRAFT_0298at 301.846 kb on - strand, within B158DRAFT_0298at 301.846 kb on - strand, within B158DRAFT_0298at 301.846 kb on - strand, within B158DRAFT_0298at 301.846 kb on - strand, within B158DRAFT_0298at 301.846 kb on - strand, within B158DRAFT_0298at 301.846 kb on - strand, within B158DRAFT_0298at 301.856 kb on - strand, within B158DRAFT_0298at 301.868 kb on + strand, within B158DRAFT_0298at 302.002 kb on - strand, within B158DRAFT_0298at 302.002 kb on - strand, within B158DRAFT_0298at 302.002 kb on - strand, within B158DRAFT_0298at 302.003 kb on - strand, within B158DRAFT_0298at 302.011 kb on + strand, within B158DRAFT_0298at 302.016 kb on + strand, within B158DRAFT_0298at 302.016 kb on + strand, within B158DRAFT_0298at 302.019 kb on - strand, within B158DRAFT_0298at 302.019 kb on - strand, within B158DRAFT_0298at 302.092 kb on + strand, within B158DRAFT_0298at 302.120 kb on - strand, within B158DRAFT_0298at 302.139 kb on - strand, within B158DRAFT_0298at 302.175 kb on + strand, within B158DRAFT_0298at 302.183 kb on - strand, within B158DRAFT_0298at 302.354 kb on + strandat 302.396 kb on - strandat 302.412 kb on - strandat 302.496 kb on + strandat 302.504 kb on - strandat 302.504 kb on - strandat 302.504 kb on - strandat 302.586 kb on + strand, within B158DRAFT_0299at 302.591 kb on + strand, within B158DRAFT_0299at 302.591 kb on + strand, within B158DRAFT_0299at 302.594 kb on - strand, within B158DRAFT_0299at 302.599 kb on - strand, within B158DRAFT_0299at 302.599 kb on - strand, within B158DRAFT_0299at 302.599 kb on - strand, within B158DRAFT_0299at 302.599 kb on - strand, within B158DRAFT_0299at 302.750 kb on - strand, within B158DRAFT_0299at 302.758 kb on - strand, within B158DRAFT_0299at 302.758 kb on - strand, within B158DRAFT_0299at 302.811 kb on + strand, within B158DRAFT_0299at 302.885 kb on + strand, within B158DRAFT_0299at 302.925 kb on - strand, within B158DRAFT_0299at 302.977 kb on + strand, within B158DRAFT_0299at 302.985 kb on - strand, within B158DRAFT_0299at 303.038 kb on + strand, within B158DRAFT_0299at 303.071 kb on + strand, within B158DRAFT_0299at 303.193 kb on - strandat 303.297 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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301,085 + B158DRAFT_0297 0.45 -0.6
301,156 + B158DRAFT_0297 0.63 +0.1
301,156 + B158DRAFT_0297 0.63 -0.9
301,218 + B158DRAFT_0297 0.79 -1.1
301,343 + -1.6
301,472 + B158DRAFT_0298 0.16 -1.2
301,529 + B158DRAFT_0298 0.22 +0.3
301,532 - B158DRAFT_0298 0.22 -0.2
301,537 + B158DRAFT_0298 0.23 +0.7
301,603 + B158DRAFT_0298 0.29 -1.3
301,611 - B158DRAFT_0298 0.30 -1.1
301,681 + B158DRAFT_0298 0.36 -0.6
301,681 + B158DRAFT_0298 0.36 -1.2
301,681 + B158DRAFT_0298 0.36 +0.7
301,688 + B158DRAFT_0298 0.37 -2.1
301,689 - B158DRAFT_0298 0.37 +1.3
301,689 - B158DRAFT_0298 0.37 -1.5
301,689 - B158DRAFT_0298 0.37 +0.5
301,689 - B158DRAFT_0298 0.37 -0.7
301,689 - B158DRAFT_0298 0.37 -1.2
301,689 - B158DRAFT_0298 0.37 -0.0
301,689 - B158DRAFT_0298 0.37 +0.2
301,722 + B158DRAFT_0298 0.40 -1.0
301,740 + B158DRAFT_0298 0.42 -0.3
301,748 - B158DRAFT_0298 0.43 -0.5
301,753 - B158DRAFT_0298 0.43 -1.5
301,753 - B158DRAFT_0298 0.43 -1.8
301,758 + B158DRAFT_0298 0.43 -0.3
301,758 - B158DRAFT_0298 0.43 -0.6
301,758 - B158DRAFT_0298 0.43 -1.2
301,758 - B158DRAFT_0298 0.43 -2.2
301,758 - B158DRAFT_0298 0.43 -0.0
301,773 + B158DRAFT_0298 0.45 -0.4
301,801 + B158DRAFT_0298 0.48 -2.8
301,813 + B158DRAFT_0298 0.49 +1.4
301,813 + B158DRAFT_0298 0.49 +0.6
301,819 - B158DRAFT_0298 0.49 -0.6
301,825 + B158DRAFT_0298 0.50 -0.9
301,838 + B158DRAFT_0298 0.51 -0.8
301,838 + B158DRAFT_0298 0.51 -0.1
301,838 + B158DRAFT_0298 0.51 +0.0
301,838 + B158DRAFT_0298 0.51 -0.2
301,838 + B158DRAFT_0298 0.51 +0.0
301,838 + B158DRAFT_0298 0.51 -2.7
301,838 + B158DRAFT_0298 0.51 +0.6
301,846 - B158DRAFT_0298 0.52 -0.0
301,846 - B158DRAFT_0298 0.52 +0.0
301,846 - B158DRAFT_0298 0.52 -1.6
301,846 - B158DRAFT_0298 0.52 -0.2
301,846 - B158DRAFT_0298 0.52 -1.1
301,846 - B158DRAFT_0298 0.52 -0.1
301,856 - B158DRAFT_0298 0.53 +1.0
301,868 + B158DRAFT_0298 0.54 -2.2
302,002 - B158DRAFT_0298 0.67 -0.5
302,002 - B158DRAFT_0298 0.67 -0.9
302,002 - B158DRAFT_0298 0.67 +0.8
302,003 - B158DRAFT_0298 0.67 +0.0
302,011 + B158DRAFT_0298 0.68 -0.8
302,016 + B158DRAFT_0298 0.68 -0.2
302,016 + B158DRAFT_0298 0.68 -0.2
302,019 - B158DRAFT_0298 0.68 -1.5
302,019 - B158DRAFT_0298 0.68 -1.0
302,092 + B158DRAFT_0298 0.75 -1.8
302,120 - B158DRAFT_0298 0.78 +2.7
302,139 - B158DRAFT_0298 0.80 -0.1
302,175 + B158DRAFT_0298 0.83 -0.5
302,183 - B158DRAFT_0298 0.84 -1.7
302,354 + -1.1
302,396 - -0.9
302,412 - +0.7
302,496 + +0.3
302,504 - -2.9
302,504 - -0.2
302,504 - +0.9
302,586 + B158DRAFT_0299 0.13 +0.8
302,591 + B158DRAFT_0299 0.14 +0.7
302,591 + B158DRAFT_0299 0.14 -0.4
302,594 - B158DRAFT_0299 0.14 -1.2
302,599 - B158DRAFT_0299 0.15 -1.8
302,599 - B158DRAFT_0299 0.15 -0.3
302,599 - B158DRAFT_0299 0.15 -1.3
302,599 - B158DRAFT_0299 0.15 +0.3
302,750 - B158DRAFT_0299 0.38 -1.1
302,758 - B158DRAFT_0299 0.39 +0.6
302,758 - B158DRAFT_0299 0.39 -0.8
302,811 + B158DRAFT_0299 0.47 -0.1
302,885 + B158DRAFT_0299 0.59 -1.5
302,925 - B158DRAFT_0299 0.65 -1.0
302,977 + B158DRAFT_0299 0.73 +1.4
302,985 - B158DRAFT_0299 0.74 -0.1
303,038 + B158DRAFT_0299 0.82 -1.5
303,071 + B158DRAFT_0299 0.87 -1.7
303,193 - -0.6
303,297 - -0.2

Or see this region's nucleotide sequence