Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0274 and B158DRAFT_0276 are separated by 313 nucleotides B158DRAFT_0276 and B158DRAFT_0277 are separated by 62 nucleotides
B158DRAFT_0274: B158DRAFT_0274 - 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.39), at 281,247 to 282,107
_0274
B158DRAFT_0276: B158DRAFT_0276 - chorismate lyase (EC 4.1.3.40), at 282,421 to 282,978
_0276
B158DRAFT_0277: B158DRAFT_0277 - Transcriptional regulator, at 283,041 to 283,943
_0277
Position (kb) 282
283 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 282.181 kb on - strand at 282.182 kb on - strand at 282.435 kb on - strand at 282.517 kb on - strand, within B158DRAFT_0276 at 282.590 kb on - strand, within B158DRAFT_0276 at 282.610 kb on - strand, within B158DRAFT_0276 at 282.663 kb on - strand, within B158DRAFT_0276 at 282.780 kb on - strand, within B158DRAFT_0276 at 282.780 kb on - strand, within B158DRAFT_0276 at 282.848 kb on + strand, within B158DRAFT_0276 at 282.856 kb on - strand, within B158DRAFT_0276 at 282.856 kb on - strand, within B158DRAFT_0276 at 282.954 kb on + strand at 282.988 kb on + strand at 283.033 kb on + strand at 283.051 kb on + strand at 283.061 kb on + strand at 283.061 kb on + strand at 283.066 kb on + strand at 283.069 kb on - strand at 283.074 kb on - strand at 283.104 kb on - strand at 283.104 kb on - strand at 283.115 kb on - strand at 283.266 kb on + strand, within B158DRAFT_0277 at 283.337 kb on + strand, within B158DRAFT_0277 at 283.345 kb on - strand, within B158DRAFT_0277 at 283.354 kb on + strand, within B158DRAFT_0277 at 283.362 kb on - strand, within B158DRAFT_0277 at 283.433 kb on + strand, within B158DRAFT_0277 at 283.441 kb on - strand, within B158DRAFT_0277 at 283.473 kb on + strand, within B158DRAFT_0277 at 283.518 kb on - strand, within B158DRAFT_0277 at 283.536 kb on - strand, within B158DRAFT_0277 at 283.536 kb on - strand, within B158DRAFT_0277 at 283.641 kb on + strand, within B158DRAFT_0277 at 283.641 kb on - strand, within B158DRAFT_0277 at 283.641 kb on - strand, within B158DRAFT_0277 at 283.642 kb on - strand, within B158DRAFT_0277 at 283.649 kb on - strand, within B158DRAFT_0277 at 283.672 kb on - strand, within B158DRAFT_0277 at 283.672 kb on - strand, within B158DRAFT_0277 at 283.689 kb on - strand, within B158DRAFT_0277 at 283.719 kb on - strand, within B158DRAFT_0277 at 283.719 kb on - strand, within B158DRAFT_0277 at 283.733 kb on + strand, within B158DRAFT_0277 at 283.741 kb on - strand, within B158DRAFT_0277 at 283.743 kb on + strand, within B158DRAFT_0277 at 283.751 kb on - strand, within B158DRAFT_0277 at 283.773 kb on - strand, within B158DRAFT_0277 at 283.773 kb on - strand, within B158DRAFT_0277 at 283.773 kb on - strand, within B158DRAFT_0277 at 283.778 kb on - strand, within B158DRAFT_0277 at 283.808 kb on - strand, within B158DRAFT_0277 at 283.850 kb on - strand, within B158DRAFT_0277 at 283.850 kb on - strand, within B158DRAFT_0277 at 283.914 kb on + strand at 283.914 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 282,181 - -2.4 282,182 - -0.7 282,435 - +0.7 282,517 - B158DRAFT_0276 0.17 +3.8 282,590 - B158DRAFT_0276 0.30 +3.5 282,610 - B158DRAFT_0276 0.34 +3.3 282,663 - B158DRAFT_0276 0.43 +3.2 282,780 - B158DRAFT_0276 0.64 +3.5 282,780 - B158DRAFT_0276 0.64 +4.0 282,848 + B158DRAFT_0276 0.77 +3.6 282,856 - B158DRAFT_0276 0.78 +4.2 282,856 - B158DRAFT_0276 0.78 +3.2 282,954 + +7.4 282,988 + +7.0 283,033 + +0.3 283,051 + -0.1 283,061 + -1.0 283,061 + +0.1 283,066 + -0.5 283,069 - +0.3 283,074 - -1.1 283,104 - -0.1 283,104 - +0.7 283,115 - +2.5 283,266 + B158DRAFT_0277 0.25 +1.7 283,337 + B158DRAFT_0277 0.33 +0.4 283,345 - B158DRAFT_0277 0.34 -0.7 283,354 + B158DRAFT_0277 0.35 +1.0 283,362 - B158DRAFT_0277 0.36 -1.3 283,433 + B158DRAFT_0277 0.43 +2.0 283,441 - B158DRAFT_0277 0.44 -2.8 283,473 + B158DRAFT_0277 0.48 -0.2 283,518 - B158DRAFT_0277 0.53 -0.7 283,536 - B158DRAFT_0277 0.55 +0.2 283,536 - B158DRAFT_0277 0.55 -1.9 283,641 + B158DRAFT_0277 0.66 -0.1 283,641 - B158DRAFT_0277 0.66 -1.1 283,641 - B158DRAFT_0277 0.66 -1.4 283,642 - B158DRAFT_0277 0.67 +1.7 283,649 - B158DRAFT_0277 0.67 -1.0 283,672 - B158DRAFT_0277 0.70 -1.2 283,672 - B158DRAFT_0277 0.70 -0.6 283,689 - B158DRAFT_0277 0.72 -0.1 283,719 - B158DRAFT_0277 0.75 -0.2 283,719 - B158DRAFT_0277 0.75 +1.9 283,733 + B158DRAFT_0277 0.77 +1.0 283,741 - B158DRAFT_0277 0.78 +1.2 283,743 + B158DRAFT_0277 0.78 +0.1 283,751 - B158DRAFT_0277 0.79 +0.1 283,773 - B158DRAFT_0277 0.81 -0.9 283,773 - B158DRAFT_0277 0.81 +0.3 283,773 - B158DRAFT_0277 0.81 -1.4 283,778 - B158DRAFT_0277 0.82 -1.3 283,808 - B158DRAFT_0277 0.85 +0.3 283,850 - B158DRAFT_0277 0.90 -1.3 283,850 - B158DRAFT_0277 0.90 -0.1 283,914 + -1.4 283,914 - +0.9
Or see this region's nucleotide sequence